RNA–Protein interactions for RNA: ENST00000264409.4

GPAT3-201, Transcript of glycerol-3-phosphate acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT3, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT3-201ENST00000264409 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
GPAT3-201ENST00000264409 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
GPAT3-201ENST00000264409 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
GPAT3-201ENST00000264409 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
GPAT3-201ENST00000264409 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
GPAT3-201ENST00000264409 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
GPAT3-201ENST00000264409 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
GPAT3-201ENST00000264409 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
GPAT3-201ENST00000264409 PCGF6Q9BYE7 350 aa24.67■■□□□ 1.54
GPAT3-201ENST00000264409 HRCP23327 699 aa24.64■■□□□ 1.53
GPAT3-201ENST00000264409 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
GPAT3-201ENST00000264409 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
GPAT3-201ENST00000264409 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
GPAT3-201ENST00000264409 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
GPAT3-201ENST00000264409 FAM9AQ8IZU1 332 aaPredicted RBP23.91■■□□□ 1.42
GPAT3-201ENST00000264409 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
GPAT3-201ENST00000264409 ABCC9O60706 1549 aa23.87■■□□□ 1.41
GPAT3-201ENST00000264409 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
GPAT3-201ENST00000264409 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
GPAT3-201ENST00000264409 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
GPAT3-201ENST00000264409 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
GPAT3-201ENST00000264409 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.37
GPAT3-201ENST00000264409 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
GPAT3-201ENST00000264409 MROH2BQ7Z745 1585 aa23.37■■□□□ 1.33
GPAT3-201ENST00000264409 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
GPAT3-201ENST00000264409 WIZO95785 1651 aa23.27■■□□□ 1.32
GPAT3-201ENST00000264409 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
GPAT3-201ENST00000264409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.3
GPAT3-201ENST00000264409 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.29
GPAT3-201ENST00000264409 NACADO15069 1562 aa23.13■■□□□ 1.29
GPAT3-201ENST00000264409 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
GPAT3-201ENST00000264409 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
GPAT3-201ENST00000264409 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
GPAT3-201ENST00000264409 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
GPAT3-201ENST00000264409 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
GPAT3-201ENST00000264409 SOGA1O94964 1423 aa22.8■■□□□ 1.24
GPAT3-201ENST00000264409 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
GPAT3-201ENST00000264409 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
GPAT3-201ENST00000264409 UBTFP17480 764 aaKnown RBP22.7■■□□□ 1.22
GPAT3-201ENST00000264409 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
GPAT3-201ENST00000264409 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
GPAT3-201ENST00000264409 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
GPAT3-201ENST00000264409 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
GPAT3-201ENST00000264409 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
GPAT3-201ENST00000264409 MYT1Q01538 1121 aa22.65■■□□□ 1.22
GPAT3-201ENST00000264409 DIEXFQ68CQ4 756 aaKnown RBP22.63■■□□□ 1.21
GPAT3-201ENST00000264409 CSRNP3Q8WYN3 585 aa22.61■■□□□ 1.21
GPAT3-201ENST00000264409 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
GPAT3-201ENST00000264409 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
GPAT3-201ENST00000264409 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
GPAT3-201ENST00000264409 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
GPAT3-201ENST00000264409 RANGAP1P46060 587 aaPredicted RBP22.49■■□□□ 1.19
GPAT3-201ENST00000264409 HNRNPUL2Q1KMD3 747 aaKnown RBP22.46■■□□□ 1.19
GPAT3-201ENST00000264409 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
GPAT3-201ENST00000264409 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
GPAT3-201ENST00000264409 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
GPAT3-201ENST00000264409 EEA1Q15075 1411 aa22.32■■□□□ 1.16
GPAT3-201ENST00000264409 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
GPAT3-201ENST00000264409 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
GPAT3-201ENST00000264409 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
GPAT3-201ENST00000264409 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
GPAT3-201ENST00000264409 CLIP1P30622 1438 aa22.22■■□□□ 1.15
GPAT3-201ENST00000264409 MIER1Q8N108 512 aa22.19■■□□□ 1.14
GPAT3-201ENST00000264409 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
GPAT3-201ENST00000264409 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
GPAT3-201ENST00000264409 APLP2Q06481 763 aa22.12■■□□□ 1.13
GPAT3-201ENST00000264409 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.13
GPAT3-201ENST00000264409 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.12
GPAT3-201ENST00000264409 KIF21BO75037 1637 aa22.06■■□□□ 1.12
GPAT3-201ENST00000264409 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
GPAT3-201ENST00000264409 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
GPAT3-201ENST00000264409 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
GPAT3-201ENST00000264409 ITGAEP38570 1179 aa21.85■■□□□ 1.09
GPAT3-201ENST00000264409 TOP2BQ02880 1626 aa21.83■■□□□ 1.09
GPAT3-201ENST00000264409 DHX57Q6P158 1386 aaKnown RBP21.81■■□□□ 1.08
GPAT3-201ENST00000264409 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
GPAT3-201ENST00000264409 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
GPAT3-201ENST00000264409 CUX1P39880 1505 aa21.7■■□□□ 1.06
GPAT3-201ENST00000264409 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
GPAT3-201ENST00000264409 ERICH3Q5RHP9 1530 aa21.64■■□□□ 1.05
GPAT3-201ENST00000264409 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
GPAT3-201ENST00000264409 KCNH8Q96L42 1107 aa21.59■■□□□ 1.05
GPAT3-201ENST00000264409 ARHGAP35Q9NRY4 1499 aa21.58■■□□□ 1.05
GPAT3-201ENST00000264409 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
GPAT3-201ENST00000264409 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
GPAT3-201ENST00000264409 RRBP1Q9P2E9 1410 aaKnown RBP21.56■■□□□ 1.04
GPAT3-201ENST00000264409 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
GPAT3-201ENST00000264409 NCAPD3P42695 1498 aa21.5■■□□□ 1.03
GPAT3-201ENST00000264409 ATP1B4Q9UN42 357 aaPredicted RBP21.49■■□□□ 1.03
GPAT3-201ENST00000264409 SUPT16HQ9Y5B9 1047 aaKnown RBP21.49■■□□□ 1.03
GPAT3-201ENST00000264409 RAB3GAP2Q9H2M9 1393 aa21.48■■□□□ 1.03
GPAT3-201ENST00000264409 CUX2O14529 1486 aa21.46■■□□□ 1.03
GPAT3-201ENST00000264409 CFTRP13569 1480 aa21.46■■□□□ 1.03
GPAT3-201ENST00000264409 SIN3AQ96ST3 1273 aa21.45■■□□□ 1.02
GPAT3-201ENST00000264409 IGF1RP08069 1367 aa21.44■■□□□ 1.02
GPAT3-201ENST00000264409 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
GPAT3-201ENST00000264409 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
GPAT3-201ENST00000264409 HIRIP3Q9BW71 556 aaPredicted RBP21.42■■□□□ 1.02
GPAT3-201ENST00000264409 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
GPAT3-201ENST00000264409 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms