RNA–Protein interactions for RNA: ENST00000264318.3

GABRA4-201, Transcript of gamma-aminobutyric acid type A receptor alpha4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA4, Length 11,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4-201ENST00000264318 MYT1Q01538 1121 aa17.15■□□□□ 0.34
GABRA4-201ENST00000264318 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
GABRA4-201ENST00000264318 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
GABRA4-201ENST00000264318 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
GABRA4-201ENST00000264318 CENPBP07199 599 aaPredicted RBP15.4■□□□□ 0.06
GABRA4-201ENST00000264318 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
GABRA4-201ENST00000264318 HRCP23327 699 aa15.08■□□□□ 0
GABRA4-201ENST00000264318 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
GABRA4-201ENST00000264318 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
GABRA4-201ENST00000264318 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.05
GABRA4-201ENST00000264318 NEFLP07196 543 aa14.55□□□□□ -0.08
GABRA4-201ENST00000264318 BCL11AQ9H165 835 aa14.46□□□□□ -0.09
GABRA4-201ENST00000264318 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
GABRA4-201ENST00000264318 GLIPR1L2Q4G1C9 344 aa14.42□□□□□ -0.1
GABRA4-201ENST00000264318 RTL5Q5HYW3 569 aaPredicted RBP14.39□□□□□ -0.11
GABRA4-201ENST00000264318 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
GABRA4-201ENST00000264318 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
GABRA4-201ENST00000264318 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
GABRA4-201ENST00000264318 PPARGC1BQ86YN6 1023 aaKnown RBP14.31□□□□□ -0.12
GABRA4-201ENST00000264318 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
GABRA4-201ENST00000264318 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
GABRA4-201ENST00000264318 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.12
GABRA4-201ENST00000264318 TRIM26Q12899 539 aaPredicted RBP14.23□□□□□ -0.13
GABRA4-201ENST00000264318 RANGAP1P46060 587 aaPredicted RBP14.21□□□□□ -0.14
GABRA4-201ENST00000264318 ANP32EQ9BTT0 268 aa14.14□□□□□ -0.15
GABRA4-201ENST00000264318 PRKCSHP14314 528 aaPredicted RBP14.11□□□□□ -0.15
GABRA4-201ENST00000264318 EIF5BO60841 1220 aaKnown RBP14.07□□□□□ -0.16
GABRA4-201ENST00000264318 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
GABRA4-201ENST00000264318 DAXXQ9UER7 740 aaPredicted RBP14.01□□□□□ -0.17
GABRA4-201ENST00000264318 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
GABRA4-201ENST00000264318 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
GABRA4-201ENST00000264318 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
GABRA4-201ENST00000264318 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
GABRA4-201ENST00000264318 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
GABRA4-201ENST00000264318 ERICH6BQ5W0A0 696 aa13.78□□□□□ -0.2
GABRA4-201ENST00000264318 APLP2Q06481 763 aa13.74□□□□□ -0.21
GABRA4-201ENST00000264318 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
GABRA4-201ENST00000264318 FAM9AQ8IZU1 332 aaPredicted RBP13.72□□□□□ -0.21
GABRA4-201ENST00000264318 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
GABRA4-201ENST00000264318 ANP32AP39687 249 aaKnown RBP13.68□□□□□ -0.22
GABRA4-201ENST00000264318 BCANQ96GW7 911 aa13.63□□□□□ -0.23
GABRA4-201ENST00000264318 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
GABRA4-201ENST00000264318 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
GABRA4-201ENST00000264318 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
GABRA4-201ENST00000264318 PKNOX2Q96KN3 472 aa13.5□□□□□ -0.25
GABRA4-201ENST00000264318 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
GABRA4-201ENST00000264318 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
GABRA4-201ENST00000264318 NBR1Q14596 966 aa13.48□□□□□ -0.25
GABRA4-201ENST00000264318 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
GABRA4-201ENST00000264318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
GABRA4-201ENST00000264318 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
GABRA4-201ENST00000264318 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
GABRA4-201ENST00000264318 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
GABRA4-201ENST00000264318 NEFMP07197 916 aa13.37□□□□□ -0.27
GABRA4-201ENST00000264318 CDK11BP21127 795 aaKnown RBP13.34□□□□□ -0.27
GABRA4-201ENST00000264318 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
GABRA4-201ENST00000264318 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
GABRA4-201ENST00000264318 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
GABRA4-201ENST00000264318 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
GABRA4-201ENST00000264318 FKBP8Q14318 412 aa13.31□□□□□ -0.28
GABRA4-201ENST00000264318 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
GABRA4-201ENST00000264318 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
GABRA4-201ENST00000264318 TRIM44Q96DX7 344 aaPredicted RBP13.28□□□□□ -0.28
GABRA4-201ENST00000264318 UBE2Q2Q8WVN8 375 aa13.27□□□□□ -0.29
GABRA4-201ENST00000264318 NAP1L5Q96NT1 182 aaPredicted RBP13.26□□□□□ -0.29
GABRA4-201ENST00000264318 NOP58Q9Y2X3 529 aaKnown RBP13.25□□□□□ -0.29
GABRA4-201ENST00000264318 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
GABRA4-201ENST00000264318 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
GABRA4-201ENST00000264318 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
GABRA4-201ENST00000264318 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
GABRA4-201ENST00000264318 ANP32CO43423 234 aa13.17□□□□□ -0.3
GABRA4-201ENST00000264318 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
GABRA4-201ENST00000264318 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
GABRA4-201ENST00000264318 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
GABRA4-201ENST00000264318 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
GABRA4-201ENST00000264318 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
GABRA4-201ENST00000264318 DDRGK1Q96HY6 314 aa13.12□□□□□ -0.31
GABRA4-201ENST00000264318 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
GABRA4-201ENST00000264318 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
GABRA4-201ENST00000264318 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
GABRA4-201ENST00000264318 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
GABRA4-201ENST00000264318 PTMSP20962 102 aa13.07□□□□□ -0.32
GABRA4-201ENST00000264318 MIER1Q8N108 512 aa13.06□□□□□ -0.32
GABRA4-201ENST00000264318 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.32
GABRA4-201ENST00000264318 L1TD1Q5T7N2 865 aaKnown RBP13.02□□□□□ -0.33
GABRA4-201ENST00000264318 PDE4CQ08493 712 aa13□□□□□ -0.33
GABRA4-201ENST00000264318 ITGAEP38570 1179 aa13□□□□□ -0.33
GABRA4-201ENST00000264318 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
GABRA4-201ENST00000264318 FANCIQ9NVI1 1328 aa12.97□□□□□ -0.33
GABRA4-201ENST00000264318 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
GABRA4-201ENST00000264318 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.34
GABRA4-201ENST00000264318 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
GABRA4-201ENST00000264318 USP35Q9P2H5 1018 aa12.94□□□□□ -0.34
GABRA4-201ENST00000264318 LAS1LQ9Y4W2 734 aaKnown RBP12.89□□□□□ -0.35
GABRA4-201ENST00000264318 BECN1Q14457 450 aa12.88□□□□□ -0.35
GABRA4-201ENST00000264318 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
GABRA4-201ENST00000264318 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
GABRA4-201ENST00000264318 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
GABRA4-201ENST00000264318 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
GABRA4-201ENST00000264318 ARXQ96QS3 562 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms