RNA–Protein interactions for RNA: ENST00000264028.4

ARCN1-201, Transcript of archain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARCN1, Length 3,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-201ENST00000264028 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
ARCN1-201ENST00000264028 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
ARCN1-201ENST00000264028 SHROOM4Q9ULL8 1493 aa13.24□□□□□ -0.29
ARCN1-201ENST00000264028 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
ARCN1-201ENST00000264028 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
ARCN1-201ENST00000264028 ABCC9O60706 1549 aa12.8□□□□□ -0.36
ARCN1-201ENST00000264028 ZCCHC6Q5VYS8 1495 aaKnown RBP12.74□□□□□ -0.37
ARCN1-201ENST00000264028 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
ARCN1-201ENST00000264028 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
ARCN1-201ENST00000264028 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
ARCN1-201ENST00000264028 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
ARCN1-201ENST00000264028 NACADO15069 1562 aa12.17□□□□□ -0.46
ARCN1-201ENST00000264028 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
ARCN1-201ENST00000264028 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
ARCN1-201ENST00000264028 CHIC1Q5VXU3 224 aa12.05□□□□□ -0.48
ARCN1-201ENST00000264028 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
ARCN1-201ENST00000264028 MYO15BQ96JP2 1530 aa12.04□□□□□ -0.48
ARCN1-201ENST00000264028 RSF1Q96T23 1441 aaPredicted RBP12□□□□□ -0.49
ARCN1-201ENST00000264028 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
ARCN1-201ENST00000264028 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
ARCN1-201ENST00000264028 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
ARCN1-201ENST00000264028 LOC105371045A0A1W2PR82 267 aa11.85□□□□□ -0.51
ARCN1-201ENST00000264028 WIZO95785 1651 aa11.76□□□□□ -0.53
ARCN1-201ENST00000264028 BAZ1AQ9NRL2 1556 aaPredicted RBP11.74□□□□□ -0.53
ARCN1-201ENST00000264028 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
ARCN1-201ENST00000264028 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
ARCN1-201ENST00000264028 SMARCA4P51532 1647 aa11.63□□□□□ -0.55
ARCN1-201ENST00000264028 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
ARCN1-201ENST00000264028 CCDC88BA6NC98 1476 aa11.59□□□□□ -0.55
ARCN1-201ENST00000264028 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
ARCN1-201ENST00000264028 TTBK1Q5TCY1 1321 aaPredicted RBP11.54□□□□□ -0.56
ARCN1-201ENST00000264028 ATAD2BQ9ULI0 1458 aa11.54□□□□□ -0.56
ARCN1-201ENST00000264028 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
ARCN1-201ENST00000264028 TOP2AP11388 1531 aaKnown RBP11.51□□□□□ -0.57
ARCN1-201ENST00000264028 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
ARCN1-201ENST00000264028 PCGF6Q9BYE7 350 aa11.51□□□□□ -0.57
ARCN1-201ENST00000264028 ABCC8Q09428 1581 aa11.48□□□□□ -0.57
ARCN1-201ENST00000264028 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
ARCN1-201ENST00000264028 SMARCA2P51531 1590 aa11.44□□□□□ -0.58
ARCN1-201ENST00000264028 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
ARCN1-201ENST00000264028 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
ARCN1-201ENST00000264028 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
ARCN1-201ENST00000264028 SOGA1O94964 1423 aa11.36□□□□□ -0.59
ARCN1-201ENST00000264028 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
ARCN1-201ENST00000264028 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
ARCN1-201ENST00000264028 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
ARCN1-201ENST00000264028 PEG3Q9GZU2 1588 aa11.26□□□□□ -0.61
ARCN1-201ENST00000264028 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
ARCN1-201ENST00000264028 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
ARCN1-201ENST00000264028 APLP2Q06481 763 aa11.2□□□□□ -0.62
ARCN1-201ENST00000264028 NESP48681 1621 aa11.19□□□□□ -0.62
ARCN1-201ENST00000264028 TRIM26Q12899 539 aaPredicted RBP11.19□□□□□ -0.62
ARCN1-201ENST00000264028 HMGXB3Q12766 1538 aa11.18□□□□□ -0.62
ARCN1-201ENST00000264028 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
ARCN1-201ENST00000264028 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
ARCN1-201ENST00000264028 CFTRP13569 1480 aa11.14□□□□□ -0.63
ARCN1-201ENST00000264028 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
ARCN1-201ENST00000264028 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
ARCN1-201ENST00000264028 CUX2O14529 1486 aa11.09□□□□□ -0.63
ARCN1-201ENST00000264028 EEA1Q15075 1411 aa11.08□□□□□ -0.64
ARCN1-201ENST00000264028 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
ARCN1-201ENST00000264028 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
ARCN1-201ENST00000264028 CUX1P39880 1505 aa11.06□□□□□ -0.64
ARCN1-201ENST00000264028 FBLN2P98095 1184 aa11.06□□□□□ -0.64
ARCN1-201ENST00000264028 TDRD9Q8NDG6 1382 aaKnown RBP11.06□□□□□ -0.64
ARCN1-201ENST00000264028 TNIKQ9UKE5 1360 aa11.06□□□□□ -0.64
ARCN1-201ENST00000264028 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
ARCN1-201ENST00000264028 HNRNPUL2Q1KMD3 747 aaKnown RBP11.04□□□□□ -0.64
ARCN1-201ENST00000264028 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
ARCN1-201ENST00000264028 CEP164Q9UPV0 1460 aa11.03□□□□□ -0.64
ARCN1-201ENST00000264028 CLIP1P30622 1438 aa11.03□□□□□ -0.64
ARCN1-201ENST00000264028 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.65
ARCN1-201ENST00000264028 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
ARCN1-201ENST00000264028 ITGAEP38570 1179 aa11.01□□□□□ -0.65
ARCN1-201ENST00000264028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11□□□□□ -0.65
ARCN1-201ENST00000264028 HRCP23327 699 aa11□□□□□ -0.65
ARCN1-201ENST00000264028 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
ARCN1-201ENST00000264028 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
ARCN1-201ENST00000264028 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
ARCN1-201ENST00000264028 ERCC6Q03468 1493 aa10.98□□□□□ -0.65
ARCN1-201ENST00000264028 CCER1Q8TC90 406 aaPredicted RBP10.98□□□□□ -0.65
ARCN1-201ENST00000264028 IGF1RP08069 1367 aa10.96□□□□□ -0.65
ARCN1-201ENST00000264028 TOPBP1Q92547 1522 aa10.92□□□□□ -0.66
ARCN1-201ENST00000264028 POLA1P09884 1462 aaPredicted RBP10.91□□□□□ -0.66
ARCN1-201ENST00000264028 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
ARCN1-201ENST00000264028 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■■■■□ 26.7
ARCN1-201ENST00000264028 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
ARCN1-201ENST00000264028 CHMP7Q8WUX9 453 aaPredicted RBP10.86□□□□□ -0.67
ARCN1-201ENST00000264028 BIVM-ERCC5R4GMW8 1640 aa10.86□□□□□ -0.67
ARCN1-201ENST00000264028 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
ARCN1-201ENST00000264028 LAMC3Q9Y6N6 1575 aa10.85□□□□□ -0.67
ARCN1-201ENST00000264028 FAM50AQ14320 339 aaKnown RBP10.84□□□□□ -0.67
ARCN1-201ENST00000264028 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
ARCN1-201ENST00000264028 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
ARCN1-201ENST00000264028 GAPVD1Q14C86 1478 aa10.82□□□□□ -0.68
ARCN1-201ENST00000264028 KIF21BO75037 1637 aa10.81□□□□□ -0.68
ARCN1-201ENST00000264028 FHOD3Q2V2M9 1422 aa10.79□□□□□ -0.68
ARCN1-201ENST00000264028 ARAP1Q96P48 1450 aa10.77□□□□□ -0.68
ARCN1-201ENST00000264028 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.68
ARCN1-201ENST00000264028 KIF21AQ7Z4S6 1674 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms