RNA–Protein interactions for RNA: ENST00000263985.10

GATB-201, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATB, Length 2,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-201ENST00000263985 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
GATB-201ENST00000263985 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
GATB-201ENST00000263985 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
GATB-201ENST00000263985 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
GATB-201ENST00000263985 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
GATB-201ENST00000263985 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
GATB-201ENST00000263985 ABCC9O60706 1549 aa26.18■■□□□ 1.78
GATB-201ENST00000263985 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.77
GATB-201ENST00000263985 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
GATB-201ENST00000263985 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
GATB-201ENST00000263985 NACADO15069 1562 aa25.58■■□□□ 1.69
GATB-201ENST00000263985 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
GATB-201ENST00000263985 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.61
GATB-201ENST00000263985 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
GATB-201ENST00000263985 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
GATB-201ENST00000263985 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
GATB-201ENST00000263985 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
GATB-201ENST00000263985 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
GATB-201ENST00000263985 WIZO95785 1651 aa24.8■■□□□ 1.56
GATB-201ENST00000263985 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
GATB-201ENST00000263985 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.54
GATB-201ENST00000263985 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
GATB-201ENST00000263985 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
GATB-201ENST00000263985 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
GATB-201ENST00000263985 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
GATB-201ENST00000263985 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
GATB-201ENST00000263985 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
GATB-201ENST00000263985 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
GATB-201ENST00000263985 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
GATB-201ENST00000263985 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
GATB-201ENST00000263985 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
GATB-201ENST00000263985 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
GATB-201ENST00000263985 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
GATB-201ENST00000263985 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
GATB-201ENST00000263985 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
GATB-201ENST00000263985 SOGA1O94964 1423 aa23.66■■□□□ 1.38
GATB-201ENST00000263985 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
GATB-201ENST00000263985 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
GATB-201ENST00000263985 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
GATB-201ENST00000263985 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
GATB-201ENST00000263985 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
GATB-201ENST00000263985 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
GATB-201ENST00000263985 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
GATB-201ENST00000263985 PPARGC1BQ86YN6 1023 aaKnown RBP23.37■■□□□ 1.33
GATB-201ENST00000263985 CFTRP13569 1480 aa23.34■■□□□ 1.33
GATB-201ENST00000263985 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
GATB-201ENST00000263985 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
GATB-201ENST00000263985 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
GATB-201ENST00000263985 CUX1P39880 1505 aa23.26■■□□□ 1.31
GATB-201ENST00000263985 EEA1Q15075 1411 aa23.24■■□□□ 1.31
GATB-201ENST00000263985 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
GATB-201ENST00000263985 CADPSQ9ULU8 1353 aa23.21■■□□□ 1.31
GATB-201ENST00000263985 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.31
GATB-201ENST00000263985 CEP162Q5TB80 1403 aa23.19■■□□□ 1.3
GATB-201ENST00000263985 NESP48681 1621 aa23.15■■□□□ 1.3
GATB-201ENST00000263985 GOLGA3Q08378 1498 aa23.14■■□□□ 1.3
GATB-201ENST00000263985 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.29
GATB-201ENST00000263985 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
GATB-201ENST00000263985 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
GATB-201ENST00000263985 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
GATB-201ENST00000263985 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
GATB-201ENST00000263985 HRCP23327 699 aa23.08■■□□□ 1.29
GATB-201ENST00000263985 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
GATB-201ENST00000263985 KIF21BO75037 1637 aa23.03■■□□□ 1.28
GATB-201ENST00000263985 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
GATB-201ENST00000263985 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
GATB-201ENST00000263985 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
GATB-201ENST00000263985 CUX2O14529 1486 aa22.9■■□□□ 1.26
GATB-201ENST00000263985 CLIP1P30622 1438 aa22.88■■□□□ 1.25
GATB-201ENST00000263985 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
GATB-201ENST00000263985 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
GATB-201ENST00000263985 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
GATB-201ENST00000263985 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
GATB-201ENST00000263985 IGF1RP08069 1367 aa22.77■■□□□ 1.24
GATB-201ENST00000263985 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
GATB-201ENST00000263985 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
GATB-201ENST00000263985 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
GATB-201ENST00000263985 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
GATB-201ENST00000263985 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
GATB-201ENST00000263985 VPS8Q8N3P4 1428 aa22.67■■□□□ 1.22
GATB-201ENST00000263985 PDS5BQ9NTI5 1447 aa22.66■■□□□ 1.22
GATB-201ENST00000263985 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
GATB-201ENST00000263985 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
GATB-201ENST00000263985 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
GATB-201ENST00000263985 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
GATB-201ENST00000263985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
GATB-201ENST00000263985 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
GATB-201ENST00000263985 APLP2Q06481 763 aa22.53■■□□□ 1.2
GATB-201ENST00000263985 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
GATB-201ENST00000263985 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
GATB-201ENST00000263985 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
GATB-201ENST00000263985 HNRNPUL2Q1KMD3 747 aaKnown RBP22.42■■□□□ 1.18
GATB-201ENST00000263985 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
GATB-201ENST00000263985 ABCA5Q8WWZ7 1642 aa22.4■■□□□ 1.18
GATB-201ENST00000263985 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.17
GATB-201ENST00000263985 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
GATB-201ENST00000263985 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
GATB-201ENST00000263985 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.17
GATB-201ENST00000263985 CUL7Q14999 1698 aa22.34■■□□□ 1.17
GATB-201ENST00000263985 FHOD3Q2V2M9 1422 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms