RNA–Protein interactions for RNA: ENST00000263239.6

DDX18-201, Transcript of DEAD-box helicase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX18, Length 3,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18-201ENST00000263239 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.05
DDX18-201ENST00000263239 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
DDX18-201ENST00000263239 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
DDX18-201ENST00000263239 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
DDX18-201ENST00000263239 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.35
DDX18-201ENST00000263239 ABCC9O60706 1549 aa12.57□□□□□ -0.4
DDX18-201ENST00000263239 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
DDX18-201ENST00000263239 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
DDX18-201ENST00000263239 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
DDX18-201ENST00000263239 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
DDX18-201ENST00000263239 NACADO15069 1562 aa12.19□□□□□ -0.46
DDX18-201ENST00000263239 RB1CC1Q8TDY2 1594 aa12.09□□□□□ -0.47
DDX18-201ENST00000263239 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
DDX18-201ENST00000263239 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
DDX18-201ENST00000263239 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
DDX18-201ENST00000263239 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
DDX18-201ENST00000263239 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
DDX18-201ENST00000263239 CHIC1Q5VXU3 224 aa11.95□□□□□ -0.5
DDX18-201ENST00000263239 WIZO95785 1651 aa11.92□□□□□ -0.5
DDX18-201ENST00000263239 BICRAQ9NZM4 1560 aa11.9□□□□□ -0.5
DDX18-201ENST00000263239 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
DDX18-201ENST00000263239 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
DDX18-201ENST00000263239 LOC105371045A0A1W2PR82 267 aa11.67□□□□□ -0.54
DDX18-201ENST00000263239 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
DDX18-201ENST00000263239 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
DDX18-201ENST00000263239 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
DDX18-201ENST00000263239 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
DDX18-201ENST00000263239 EHMT2Q96KQ7 1210 aa11.58□□□□□ -0.56
DDX18-201ENST00000263239 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
DDX18-201ENST00000263239 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
DDX18-201ENST00000263239 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
DDX18-201ENST00000263239 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
DDX18-201ENST00000263239 PEG3Q9GZU2 1588 aa11.51□□□□□ -0.57
DDX18-201ENST00000263239 BAZ1BQ9UIG0 1483 aaKnown RBP11.45□□□□□ -0.58
DDX18-201ENST00000263239 RUSC2Q8N2Y8 1516 aa11.36□□□□□ -0.59
DDX18-201ENST00000263239 SOGA1O94964 1423 aa11.35□□□□□ -0.59
DDX18-201ENST00000263239 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
DDX18-201ENST00000263239 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
DDX18-201ENST00000263239 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
DDX18-201ENST00000263239 DNAJC5BQ9UF47 199 aa11.29□□□□□ -0.6
DDX18-201ENST00000263239 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
DDX18-201ENST00000263239 WRNQ14191 1432 aaPredicted RBP eCLIP11.27□□□□□ -0.61
DDX18-201ENST00000263239 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
DDX18-201ENST00000263239 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
DDX18-201ENST00000263239 CUX1P39880 1505 aa11.16□□□□□ -0.62
DDX18-201ENST00000263239 CFTRP13569 1480 aa11.16□□□□□ -0.62
DDX18-201ENST00000263239 NESP48681 1621 aa11.15□□□□□ -0.62
DDX18-201ENST00000263239 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
DDX18-201ENST00000263239 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
DDX18-201ENST00000263239 BIVM-ERCC5R4GMW8 1640 aa11.11□□□□□ -0.63
DDX18-201ENST00000263239 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
DDX18-201ENST00000263239 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
DDX18-201ENST00000263239 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
DDX18-201ENST00000263239 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
DDX18-201ENST00000263239 PRDM2Q13029 1718 aa11.06□□□□□ -0.64
DDX18-201ENST00000263239 CEP162Q5TB80 1403 aa11.06□□□□□ -0.64
DDX18-201ENST00000263239 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
DDX18-201ENST00000263239 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
DDX18-201ENST00000263239 FANCD2Q9BXW9 1451 aa11.01□□□□□ -0.65
DDX18-201ENST00000263239 EEA1Q15075 1411 aa11□□□□□ -0.65
DDX18-201ENST00000263239 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
DDX18-201ENST00000263239 TRIM26Q12899 539 aaPredicted RBP11□□□□□ -0.65
DDX18-201ENST00000263239 KIF21BO75037 1637 aa10.99□□□□□ -0.65
DDX18-201ENST00000263239 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
DDX18-201ENST00000263239 CEP164Q9UPV0 1460 aa10.97□□□□□ -0.65
DDX18-201ENST00000263239 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.65
DDX18-201ENST00000263239 HRCP23327 699 aa10.96□□□□□ -0.66
DDX18-201ENST00000263239 CUX2O14529 1486 aa10.94□□□□□ -0.66
DDX18-201ENST00000263239 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
DDX18-201ENST00000263239 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
DDX18-201ENST00000263239 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
DDX18-201ENST00000263239 TOPBP1Q92547 1522 aa10.91□□□□□ -0.66
DDX18-201ENST00000263239 POLA1P09884 1462 aaPredicted RBP10.9□□□□□ -0.66
DDX18-201ENST00000263239 CLIP1P30622 1438 aa10.9□□□□□ -0.66
DDX18-201ENST00000263239 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
DDX18-201ENST00000263239 IGF1RP08069 1367 aa10.88□□□□□ -0.67
DDX18-201ENST00000263239 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
DDX18-201ENST00000263239 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
DDX18-201ENST00000263239 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
DDX18-201ENST00000263239 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
DDX18-201ENST00000263239 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
DDX18-201ENST00000263239 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
DDX18-201ENST00000263239 ABCA10Q8WWZ4 1543 aa10.8□□□□□ -0.68
DDX18-201ENST00000263239 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
DDX18-201ENST00000263239 CARMIL1Q5VZK9 1371 aa10.79□□□□□ -0.68
DDX18-201ENST00000263239 ARHGAP35Q9NRY4 1499 aa10.78□□□□□ -0.68
DDX18-201ENST00000263239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
DDX18-201ENST00000263239 PDS5BQ9NTI5 1447 aa10.77□□□□□ -0.68
DDX18-201ENST00000263239 P3H3Q8IVL6 736 aa10.77□□□□□ -0.69
DDX18-201ENST00000263239 KANK4Q5T7N3 995 aaPredicted RBP10.76□□□□□ -0.69
DDX18-201ENST00000263239 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
DDX18-201ENST00000263239 ABCA5Q8WWZ7 1642 aa10.74□□□□□ -0.69
DDX18-201ENST00000263239 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.693e-8■■■□□ 16.9
DDX18-201ENST00000263239 ZNF608Q9ULD9 1512 aaPredicted RBP10.72□□□□□ -0.69
DDX18-201ENST00000263239 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
DDX18-201ENST00000263239 HNRNPUL2Q1KMD3 747 aaKnown RBP10.68□□□□□ -0.7
DDX18-201ENST00000263239 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
DDX18-201ENST00000263239 FHOD3Q2V2M9 1422 aa10.68□□□□□ -0.7
DDX18-201ENST00000263239 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
DDX18-201ENST00000263239 CUL7Q14999 1698 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms