RNA–Protein interactions for RNA: ENST00000263097.8

CNN2-201, Transcript of calponin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN2, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-201ENST00000263097 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
CNN2-201ENST00000263097 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
CNN2-201ENST00000263097 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
CNN2-201ENST00000263097 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
CNN2-201ENST00000263097 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
CNN2-201ENST00000263097 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
CNN2-201ENST00000263097 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
CNN2-201ENST00000263097 ABCC9O60706 1549 aa25.08■■□□□ 1.61
CNN2-201ENST00000263097 NACADO15069 1562 aa24.85■■□□□ 1.57
CNN2-201ENST00000263097 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.56
CNN2-201ENST00000263097 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
CNN2-201ENST00000263097 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
CNN2-201ENST00000263097 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
CNN2-201ENST00000263097 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
CNN2-201ENST00000263097 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
CNN2-201ENST00000263097 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
CNN2-201ENST00000263097 HRCP23327 699 aa24.02■■□□□ 1.44
CNN2-201ENST00000263097 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
CNN2-201ENST00000263097 BICRAQ9NZM4 1560 aa23.89■■□□□ 1.42
CNN2-201ENST00000263097 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
CNN2-201ENST00000263097 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
CNN2-201ENST00000263097 WIZO95785 1651 aa23.79■■□□□ 1.4
CNN2-201ENST00000263097 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
CNN2-201ENST00000263097 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
CNN2-201ENST00000263097 TOP2AP11388 1531 aaKnown RBP23.51■■□□□ 1.35
CNN2-201ENST00000263097 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
CNN2-201ENST00000263097 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
CNN2-201ENST00000263097 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
CNN2-201ENST00000263097 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
CNN2-201ENST00000263097 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
CNN2-201ENST00000263097 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
CNN2-201ENST00000263097 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
CNN2-201ENST00000263097 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
CNN2-201ENST00000263097 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
CNN2-201ENST00000263097 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
CNN2-201ENST00000263097 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
CNN2-201ENST00000263097 NCAPD3P42695 1498 aa23■■□□□ 1.27
CNN2-201ENST00000263097 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
CNN2-201ENST00000263097 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
CNN2-201ENST00000263097 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
CNN2-201ENST00000263097 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
CNN2-201ENST00000263097 CC2D2AQ9P2K1 1620 aa22.67■■□□□ 1.22
CNN2-201ENST00000263097 SOGA1O94964 1423 aa22.66■■□□□ 1.22
CNN2-201ENST00000263097 SYNJ1O43426 1573 aa22.65■■□□□ 1.22
CNN2-201ENST00000263097 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
CNN2-201ENST00000263097 CFTRP13569 1480 aa22.59■■□□□ 1.21
CNN2-201ENST00000263097 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
CNN2-201ENST00000263097 EEA1Q15075 1411 aa22.56■■□□□ 1.2
CNN2-201ENST00000263097 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
CNN2-201ENST00000263097 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
CNN2-201ENST00000263097 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
CNN2-201ENST00000263097 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
CNN2-201ENST00000263097 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
CNN2-201ENST00000263097 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
CNN2-201ENST00000263097 CUX1P39880 1505 aa22.39■■□□□ 1.18
CNN2-201ENST00000263097 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
CNN2-201ENST00000263097 PRDM2Q13029 1718 aa22.36■■□□□ 1.17
CNN2-201ENST00000263097 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
CNN2-201ENST00000263097 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
CNN2-201ENST00000263097 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
CNN2-201ENST00000263097 KIF21BO75037 1637 aa22.26■■□□□ 1.15
CNN2-201ENST00000263097 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
CNN2-201ENST00000263097 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
CNN2-201ENST00000263097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
CNN2-201ENST00000263097 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
CNN2-201ENST00000263097 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
CNN2-201ENST00000263097 NESP48681 1621 aa22.17■■□□□ 1.14
CNN2-201ENST00000263097 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
CNN2-201ENST00000263097 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CNN2-201ENST00000263097 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
CNN2-201ENST00000263097 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
CNN2-201ENST00000263097 LAMC3Q9Y6N6 1575 aa22.09■■□□□ 1.13
CNN2-201ENST00000263097 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
CNN2-201ENST00000263097 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
CNN2-201ENST00000263097 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
CNN2-201ENST00000263097 CUX2O14529 1486 aa22■■□□□ 1.11
CNN2-201ENST00000263097 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
CNN2-201ENST00000263097 ACIN1Q9UKV3 1341 aaKnown RBP21.99■■□□□ 1.11
CNN2-201ENST00000263097 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
CNN2-201ENST00000263097 CLIP1P30622 1438 aa21.98■■□□□ 1.11
CNN2-201ENST00000263097 IGF1RP08069 1367 aa21.96■■□□□ 1.11
CNN2-201ENST00000263097 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
CNN2-201ENST00000263097 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
CNN2-201ENST00000263097 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
CNN2-201ENST00000263097 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
CNN2-201ENST00000263097 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
CNN2-201ENST00000263097 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
CNN2-201ENST00000263097 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
CNN2-201ENST00000263097 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
CNN2-201ENST00000263097 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.09
CNN2-201ENST00000263097 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
CNN2-201ENST00000263097 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
CNN2-201ENST00000263097 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
CNN2-201ENST00000263097 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
CNN2-201ENST00000263097 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
CNN2-201ENST00000263097 APLP2Q06481 763 aa21.75■■□□□ 1.07
CNN2-201ENST00000263097 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
CNN2-201ENST00000263097 ARHGAP35Q9NRY4 1499 aa21.68■■□□□ 1.06
CNN2-201ENST00000263097 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
CNN2-201ENST00000263097 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms