RNA–Protein interactions for RNA: ENST00000263094.10

ABCA7-201, Transcript of ATP binding cassette subfamily A member 7, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ABCA7, Length 6,816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-201ENST00000263094 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.59
ABCA7-201ENST00000263094 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
ABCA7-201ENST00000263094 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
ABCA7-201ENST00000263094 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
ABCA7-201ENST00000263094 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.39
ABCA7-201ENST00000263094 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
ABCA7-201ENST00000263094 ERICH6Q7L0X2 663 aa23.17■■□□□ 1.3
ABCA7-201ENST00000263094 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
ABCA7-201ENST00000263094 APLP2Q06481 763 aa22.85■■□□□ 1.25
ABCA7-201ENST00000263094 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
ABCA7-201ENST00000263094 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
ABCA7-201ENST00000263094 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
ABCA7-201ENST00000263094 MYT1Q01538 1121 aa22.6■■□□□ 1.21
ABCA7-201ENST00000263094 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
ABCA7-201ENST00000263094 RANGAP1P46060 587 aaPredicted RBP22.49■■□□□ 1.19
ABCA7-201ENST00000263094 YTHDC1Q96MU7 727 aaKnown RBP22.45■■□□□ 1.18
ABCA7-201ENST00000263094 NEFLP07196 543 aa22.26■■□□□ 1.15
ABCA7-201ENST00000263094 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
ABCA7-201ENST00000263094 ZEB1P37275 1124 aaPredicted RBP21.97■■□□□ 1.11
ABCA7-201ENST00000263094 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
ABCA7-201ENST00000263094 DAXXQ9UER7 740 aaPredicted RBP21.92■■□□□ 1.1
ABCA7-201ENST00000263094 PPARGC1BQ86YN6 1023 aaKnown RBP21.83■■□□□ 1.08
ABCA7-201ENST00000263094 POLR3GLQ9BT43 218 aa21.75■■□□□ 1.07
ABCA7-201ENST00000263094 CNGB1Q14028 1251 aaPredicted RBP21.74■■□□□ 1.07
ABCA7-201ENST00000263094 UBTFP17480 764 aaKnown RBP21.7■■□□□ 1.06
ABCA7-201ENST00000263094 ITGAEP38570 1179 aa21.45■■□□□ 1.02
ABCA7-201ENST00000263094 MYT1LQ9UL68 1186 aa21.43■■□□□ 1.02
ABCA7-201ENST00000263094 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
ABCA7-201ENST00000263094 CHIC1Q5VXU3 224 aa21.39■■□□□ 1.01
ABCA7-201ENST00000263094 RTL5Q5HYW3 569 aaPredicted RBP21.38■■□□□ 1.01
ABCA7-201ENST00000263094 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1
ABCA7-201ENST00000263094 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
ABCA7-201ENST00000263094 HRCP23327 699 aa21.26■□□□□ 0.99
ABCA7-201ENST00000263094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.19■□□□□ 0.98
ABCA7-201ENST00000263094 HNRNPUL2Q1KMD3 747 aaKnown RBP21.19■□□□□ 0.98
ABCA7-201ENST00000263094 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
ABCA7-201ENST00000263094 BCANQ96GW7 911 aa21.1■□□□□ 0.97
ABCA7-201ENST00000263094 BCL11AQ9H165 835 aa21.02■□□□□ 0.95
ABCA7-201ENST00000263094 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
ABCA7-201ENST00000263094 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
ABCA7-201ENST00000263094 ABCC9O60706 1549 aa20.77■□□□□ 0.91
ABCA7-201ENST00000263094 GTF3C3Q9Y5Q9 886 aa20.74■□□□□ 0.91
ABCA7-201ENST00000263094 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
ABCA7-201ENST00000263094 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
ABCA7-201ENST00000263094 ZBTB47Q9UFB7 747 aaPredicted RBP20.7■□□□□ 0.9
ABCA7-201ENST00000263094 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
ABCA7-201ENST00000263094 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
ABCA7-201ENST00000263094 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.95e-7■■■■□ 21.4
ABCA7-201ENST00000263094 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
ABCA7-201ENST00000263094 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
ABCA7-201ENST00000263094 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
ABCA7-201ENST00000263094 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
ABCA7-201ENST00000263094 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
ABCA7-201ENST00000263094 ANP32CO43423 234 aa20.46■□□□□ 0.87
ABCA7-201ENST00000263094 ANP32AP39687 249 aaKnown RBP20.4■□□□□ 0.86
ABCA7-201ENST00000263094 ARXQ96QS3 562 aa20.33■□□□□ 0.84
ABCA7-201ENST00000263094 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
ABCA7-201ENST00000263094 FBLN2P98095 1184 aa20.25■□□□□ 0.83
ABCA7-201ENST00000263094 HSP90AA1P07900 732 aaKnown RBP20.24■□□□□ 0.83
ABCA7-201ENST00000263094 NBR1Q14596 966 aa20.21■□□□□ 0.83
ABCA7-201ENST00000263094 NEFMP07197 916 aa20.19■□□□□ 0.82
ABCA7-201ENST00000263094 GLIPR1L2Q4G1C9 344 aa20.16■□□□□ 0.82
ABCA7-201ENST00000263094 FKBP8Q14318 412 aa20.12■□□□□ 0.81
ABCA7-201ENST00000263094 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
ABCA7-201ENST00000263094 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
ABCA7-201ENST00000263094 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
ABCA7-201ENST00000263094 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
ABCA7-201ENST00000263094 P3H3Q8IVL6 736 aa20■□□□□ 0.79
ABCA7-201ENST00000263094 SCRIBQ14160 1630 aa20■□□□□ 0.79
ABCA7-201ENST00000263094 UPF2Q9HAU5 1272 aaKnown RBP19.97■□□□□ 0.79
ABCA7-201ENST00000263094 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
ABCA7-201ENST00000263094 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
ABCA7-201ENST00000263094 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
ABCA7-201ENST00000263094 HNRNPUQ00839 825 aaKnown RBP eCLIP19.87■□□□□ 0.77
ABCA7-201ENST00000263094 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
ABCA7-201ENST00000263094 IRX6P78412 446 aaPredicted RBP19.81■□□□□ 0.76
ABCA7-201ENST00000263094 CDK11BP21127 795 aaKnown RBP19.79■□□□□ 0.76
ABCA7-201ENST00000263094 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
ABCA7-201ENST00000263094 CCDC136Q96JN2 1154 aa19.78■□□□□ 0.76
ABCA7-201ENST00000263094 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
ABCA7-201ENST00000263094 TPRNQ4KMQ1 711 aa19.74■□□□□ 0.75
ABCA7-201ENST00000263094 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
ABCA7-201ENST00000263094 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
ABCA7-201ENST00000263094 A0A0G2JS52 829 aa19.68■□□□□ 0.74
ABCA7-201ENST00000263094 TULP1O00294 542 aaPredicted RBP19.68■□□□□ 0.74
ABCA7-201ENST00000263094 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
ABCA7-201ENST00000263094 STAG3Q9UJ98 1225 aa19.66■□□□□ 0.74
ABCA7-201ENST00000263094 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.65■□□□□ 0.74
ABCA7-201ENST00000263094 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
ABCA7-201ENST00000263094 PLEKHG5O94827 1062 aa19.64■□□□□ 0.74
ABCA7-201ENST00000263094 TRIM44Q96DX7 344 aaPredicted RBP19.63■□□□□ 0.73
ABCA7-201ENST00000263094 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
ABCA7-201ENST00000263094 RTN4Q9NQC3 1192 aaKnown RBP19.62■□□□□ 0.73
ABCA7-201ENST00000263094 NCLP19338 710 aaKnown RBP19.61■□□□□ 0.73
ABCA7-201ENST00000263094 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
ABCA7-201ENST00000263094 TMC1Q8TDI8 760 aa19.59■□□□□ 0.73
ABCA7-201ENST00000263094 SENP3-EIF4A1A0A087X0R7 540 aa19.57■□□□□ 0.72
ABCA7-201ENST00000263094 AMER1Q5JTC6 1135 aaPredicted RBP19.56■□□□□ 0.72
ABCA7-201ENST00000263094 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
ABCA7-201ENST00000263094 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms