RNA–Protein interactions for RNA: ENST00000261817.6

PSMD9-201, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PSMD9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-201ENST00000261817 NISCHQ9Y2I1 1504 aa34.33■■■■□ 3.09
PSMD9-201ENST00000261817 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
PSMD9-201ENST00000261817 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
PSMD9-201ENST00000261817 ZCCHC6Q5VYS8 1495 aaKnown RBP28.96■■■□□ 2.23
PSMD9-201ENST00000261817 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
PSMD9-201ENST00000261817 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
PSMD9-201ENST00000261817 DCAF1Q9Y4B6 1507 aa28.16■■■□□ 2.1
PSMD9-201ENST00000261817 ABCC9O60706 1549 aa27.61■■■□□ 2.01
PSMD9-201ENST00000261817 SCRIBQ14160 1630 aa27.53■■■□□ 2
PSMD9-201ENST00000261817 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
PSMD9-201ENST00000261817 NACADO15069 1562 aa27.28■■□□□ 1.96
PSMD9-201ENST00000261817 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
PSMD9-201ENST00000261817 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
PSMD9-201ENST00000261817 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
PSMD9-201ENST00000261817 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
PSMD9-201ENST00000261817 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
PSMD9-201ENST00000261817 WIZO95785 1651 aa26.53■■□□□ 1.84
PSMD9-201ENST00000261817 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
PSMD9-201ENST00000261817 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
PSMD9-201ENST00000261817 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
PSMD9-201ENST00000261817 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
PSMD9-201ENST00000261817 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
PSMD9-201ENST00000261817 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
PSMD9-201ENST00000261817 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
PSMD9-201ENST00000261817 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
PSMD9-201ENST00000261817 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
PSMD9-201ENST00000261817 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
PSMD9-201ENST00000261817 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
PSMD9-201ENST00000261817 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
PSMD9-201ENST00000261817 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
PSMD9-201ENST00000261817 EIF4G1Q04637 1599 aaKnown RBP25.94■■□□□ 1.74
PSMD9-201ENST00000261817 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
PSMD9-201ENST00000261817 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
PSMD9-201ENST00000261817 HRCP23327 699 aa25.69■■□□□ 1.7
PSMD9-201ENST00000261817 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
PSMD9-201ENST00000261817 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
PSMD9-201ENST00000261817 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
PSMD9-201ENST00000261817 SOGA1O94964 1423 aa25.46■■□□□ 1.67
PSMD9-201ENST00000261817 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
PSMD9-201ENST00000261817 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
PSMD9-201ENST00000261817 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
PSMD9-201ENST00000261817 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
PSMD9-201ENST00000261817 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
PSMD9-201ENST00000261817 EEA1Q15075 1411 aa25.26■■□□□ 1.63
PSMD9-201ENST00000261817 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
PSMD9-201ENST00000261817 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
PSMD9-201ENST00000261817 UBTFP17480 764 aaKnown RBP25.2■■□□□ 1.63
PSMD9-201ENST00000261817 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
PSMD9-201ENST00000261817 TNIKQ9UKE5 1360 aa25.13■■□□□ 1.61
PSMD9-201ENST00000261817 GOLGA3Q08378 1498 aa25.1■■□□□ 1.61
PSMD9-201ENST00000261817 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
PSMD9-201ENST00000261817 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
PSMD9-201ENST00000261817 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
PSMD9-201ENST00000261817 KIF21BO75037 1637 aa24.94■■□□□ 1.58
PSMD9-201ENST00000261817 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
PSMD9-201ENST00000261817 CFTRP13569 1480 aa24.92■■□□□ 1.58
PSMD9-201ENST00000261817 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
PSMD9-201ENST00000261817 CUX1P39880 1505 aa24.86■■□□□ 1.57
PSMD9-201ENST00000261817 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
PSMD9-201ENST00000261817 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
PSMD9-201ENST00000261817 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
PSMD9-201ENST00000261817 CLIP1P30622 1438 aa24.79■■□□□ 1.56
PSMD9-201ENST00000261817 PRDM2Q13029 1718 aa24.74■■□□□ 1.55
PSMD9-201ENST00000261817 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
PSMD9-201ENST00000261817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.54
PSMD9-201ENST00000261817 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
PSMD9-201ENST00000261817 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
PSMD9-201ENST00000261817 CCER1Q8TC90 406 aaPredicted RBP24.63■■□□□ 1.53
PSMD9-201ENST00000261817 VPS8Q8N3P4 1428 aa24.62■■□□□ 1.53
PSMD9-201ENST00000261817 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
PSMD9-201ENST00000261817 APLP2Q06481 763 aa24.58■■□□□ 1.53
PSMD9-201ENST00000261817 CUX2O14529 1486 aa24.53■■□□□ 1.52
PSMD9-201ENST00000261817 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
PSMD9-201ENST00000261817 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
PSMD9-201ENST00000261817 NESP48681 1621 aa24.45■■□□□ 1.5
PSMD9-201ENST00000261817 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
PSMD9-201ENST00000261817 IGF1RP08069 1367 aa24.4■■□□□ 1.5
PSMD9-201ENST00000261817 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.49
PSMD9-201ENST00000261817 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.48
PSMD9-201ENST00000261817 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
PSMD9-201ENST00000261817 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
PSMD9-201ENST00000261817 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
PSMD9-201ENST00000261817 ARHGAP35Q9NRY4 1499 aa24.28■■□□□ 1.48
PSMD9-201ENST00000261817 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
PSMD9-201ENST00000261817 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
PSMD9-201ENST00000261817 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
PSMD9-201ENST00000261817 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
PSMD9-201ENST00000261817 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
PSMD9-201ENST00000261817 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
PSMD9-201ENST00000261817 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
PSMD9-201ENST00000261817 P3H3Q8IVL6 736 aa24.09■■□□□ 1.45
PSMD9-201ENST00000261817 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
PSMD9-201ENST00000261817 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
PSMD9-201ENST00000261817 CUL7Q14999 1698 aa24.02■■□□□ 1.44
PSMD9-201ENST00000261817 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
PSMD9-201ENST00000261817 WDR97A6NE52 1622 aa24■■□□□ 1.43
PSMD9-201ENST00000261817 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
PSMD9-201ENST00000261817 RRBP1Q9P2E9 1410 aaKnown RBP23.95■■□□□ 1.43
PSMD9-201ENST00000261817 FHOD3Q2V2M9 1422 aa23.95■■□□□ 1.42
PSMD9-201ENST00000261817 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms