RNA–Protein interactions for RNA: ENST00000260187.6

USP2-201, Transcript of ubiquitin specific peptidase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene USP2, Length 3,732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP2-201ENST00000260187 NISCHQ9Y2I1 1504 aa25.72■■□□□ 1.71
USP2-201ENST00000260187 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
USP2-201ENST00000260187 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
USP2-201ENST00000260187 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
USP2-201ENST00000260187 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
USP2-201ENST00000260187 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
USP2-201ENST00000260187 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
USP2-201ENST00000260187 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
USP2-201ENST00000260187 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
USP2-201ENST00000260187 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
USP2-201ENST00000260187 HRCP23327 699 aa22.44■■□□□ 1.18
USP2-201ENST00000260187 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
USP2-201ENST00000260187 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
USP2-201ENST00000260187 MYO15BQ96JP2 1530 aa22.02■■□□□ 1.11
USP2-201ENST00000260187 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
USP2-201ENST00000260187 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
USP2-201ENST00000260187 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
USP2-201ENST00000260187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
USP2-201ENST00000260187 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
USP2-201ENST00000260187 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
USP2-201ENST00000260187 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
USP2-201ENST00000260187 UBTFP17480 764 aaKnown RBP21.33■■□□□ 1
USP2-201ENST00000260187 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
USP2-201ENST00000260187 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
USP2-201ENST00000260187 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
USP2-201ENST00000260187 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
USP2-201ENST00000260187 APLP2Q06481 763 aa21.05■□□□□ 0.96
USP2-201ENST00000260187 ABCC9O60706 1549 aa21.04■□□□□ 0.96
USP2-201ENST00000260187 DIEXFQ68CQ4 756 aaKnown RBP21.04■□□□□ 0.96
USP2-201ENST00000260187 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
USP2-201ENST00000260187 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
USP2-201ENST00000260187 NEUROD1Q13562 356 aa20.88■□□□□ 0.93
USP2-201ENST00000260187 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
USP2-201ENST00000260187 ITGAEP38570 1179 aa20.83■□□□□ 0.93
USP2-201ENST00000260187 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
USP2-201ENST00000260187 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
USP2-201ENST00000260187 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
USP2-201ENST00000260187 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
USP2-201ENST00000260187 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
USP2-201ENST00000260187 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
USP2-201ENST00000260187 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
USP2-201ENST00000260187 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
USP2-201ENST00000260187 ZNF316A6NFI3 1004 aaPredicted RBP20.53■□□□□ 0.88
USP2-201ENST00000260187 MIER1Q8N108 512 aa20.46■□□□□ 0.87
USP2-201ENST00000260187 BCANQ96GW7 911 aa20.38■□□□□ 0.85
USP2-201ENST00000260187 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
USP2-201ENST00000260187 SOGA1O94964 1423 aa20.27■□□□□ 0.84
USP2-201ENST00000260187 CEP162Q5TB80 1403 aa20.26■□□□□ 0.83
USP2-201ENST00000260187 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
USP2-201ENST00000260187 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
USP2-201ENST00000260187 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
USP2-201ENST00000260187 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
USP2-201ENST00000260187 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
USP2-201ENST00000260187 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
USP2-201ENST00000260187 WIZO95785 1651 aa20.1■□□□□ 0.81
USP2-201ENST00000260187 RUSC2Q8N2Y8 1516 aa20.06■□□□□ 0.8
USP2-201ENST00000260187 NEFLP07196 543 aa19.98■□□□□ 0.79
USP2-201ENST00000260187 CLIP1P30622 1438 aa19.97■□□□□ 0.79
USP2-201ENST00000260187 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
USP2-201ENST00000260187 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
USP2-201ENST00000260187 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
USP2-201ENST00000260187 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
USP2-201ENST00000260187 ARID3CA6NKF2 412 aa19.89■□□□□ 0.78
USP2-201ENST00000260187 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
USP2-201ENST00000260187 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
USP2-201ENST00000260187 FKBP8Q14318 412 aa19.85■□□□□ 0.77
USP2-201ENST00000260187 KCNH8Q96L42 1107 aa19.83■□□□□ 0.76
USP2-201ENST00000260187 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
USP2-201ENST00000260187 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
USP2-201ENST00000260187 MYT1Q01538 1121 aa19.78■□□□□ 0.76
USP2-201ENST00000260187 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
USP2-201ENST00000260187 IRX6P78412 446 aaPredicted RBP19.75■□□□□ 0.75
USP2-201ENST00000260187 NACADO15069 1562 aa19.75■□□□□ 0.75
USP2-201ENST00000260187 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
USP2-201ENST00000260187 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
USP2-201ENST00000260187 SUPT16HQ9Y5B9 1047 aaKnown RBP19.71■□□□□ 0.75
USP2-201ENST00000260187 ANP32CO43423 234 aa19.66■□□□□ 0.74
USP2-201ENST00000260187 CHIC2Q9UKJ5 165 aa19.61■□□□□ 0.73
USP2-201ENST00000260187 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
USP2-201ENST00000260187 EEA1Q15075 1411 aa19.59■□□□□ 0.73
USP2-201ENST00000260187 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
USP2-201ENST00000260187 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
USP2-201ENST00000260187 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
USP2-201ENST00000260187 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
USP2-201ENST00000260187 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
USP2-201ENST00000260187 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
USP2-201ENST00000260187 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
USP2-201ENST00000260187 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
USP2-201ENST00000260187 RRP7BPQ9NSQ0 103 aa19.43■□□□□ 0.7
USP2-201ENST00000260187 TSHZ2Q9NRE2 1034 aa19.42■□□□□ 0.7
USP2-201ENST00000260187 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
USP2-201ENST00000260187 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
USP2-201ENST00000260187 CCNB3Q8WWL7 1395 aa19.4■□□□□ 0.7
USP2-201ENST00000260187 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
USP2-201ENST00000260187 RAB3GAP2Q9H2M9 1393 aa19.35■□□□□ 0.69
USP2-201ENST00000260187 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
USP2-201ENST00000260187 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
USP2-201ENST00000260187 FOXD1Q16676 465 aa19.28■□□□□ 0.68
USP2-201ENST00000260187 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
USP2-201ENST00000260187 ZNF777Q9ULD5 760 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms