RNA–Protein interactions for RNA: ENST00000258646.3

RCBTB1-201, Transcript of RCC1 and BTB domain containing protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RCBTB1, Length 3,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1-201ENST00000258646 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
RCBTB1-201ENST00000258646 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
RCBTB1-201ENST00000258646 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
RCBTB1-201ENST00000258646 ABCC9O60706 1549 aa14.51□□□□□ -0.09
RCBTB1-201ENST00000258646 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.1
RCBTB1-201ENST00000258646 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
RCBTB1-201ENST00000258646 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
RCBTB1-201ENST00000258646 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
RCBTB1-201ENST00000258646 FAM9AQ8IZU1 332 aaPredicted RBP13.58□□□□□ -0.24
RCBTB1-201ENST00000258646 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
RCBTB1-201ENST00000258646 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
RCBTB1-201ENST00000258646 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
RCBTB1-201ENST00000258646 RANGAP1P46060 587 aaPredicted RBP13.42□□□□□ -0.26
RCBTB1-201ENST00000258646 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
RCBTB1-201ENST00000258646 NACADO15069 1562 aa13.3□□□□□ -0.28
RCBTB1-201ENST00000258646 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
RCBTB1-201ENST00000258646 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
RCBTB1-201ENST00000258646 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
RCBTB1-201ENST00000258646 FBLN2P98095 1184 aa13.1□□□□□ -0.31
RCBTB1-201ENST00000258646 APLP2Q06481 763 aa13.07□□□□□ -0.32
RCBTB1-201ENST00000258646 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
RCBTB1-201ENST00000258646 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
RCBTB1-201ENST00000258646 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
RCBTB1-201ENST00000258646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
RCBTB1-201ENST00000258646 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
RCBTB1-201ENST00000258646 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
RCBTB1-201ENST00000258646 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
RCBTB1-201ENST00000258646 LOC105371045A0A1W2PR82 267 aa12.85□□□□□ -0.35
RCBTB1-201ENST00000258646 MYO15BQ96JP2 1530 aa12.82□□□□□ -0.36
RCBTB1-201ENST00000258646 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
RCBTB1-201ENST00000258646 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
RCBTB1-201ENST00000258646 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
RCBTB1-201ENST00000258646 BAZ1AQ9NRL2 1556 aaPredicted RBP12.75□□□□□ -0.37
RCBTB1-201ENST00000258646 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
RCBTB1-201ENST00000258646 MROH2BQ7Z745 1585 aa12.72□□□□□ -0.37
RCBTB1-201ENST00000258646 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
RCBTB1-201ENST00000258646 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
RCBTB1-201ENST00000258646 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
RCBTB1-201ENST00000258646 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
RCBTB1-201ENST00000258646 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
RCBTB1-201ENST00000258646 ITGAEP38570 1179 aa12.59□□□□□ -0.39
RCBTB1-201ENST00000258646 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
RCBTB1-201ENST00000258646 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
RCBTB1-201ENST00000258646 PDS5BQ9NTI5 1447 aa12.52□□□□□ -0.41
RCBTB1-201ENST00000258646 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
RCBTB1-201ENST00000258646 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
RCBTB1-201ENST00000258646 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
RCBTB1-201ENST00000258646 WIZO95785 1651 aa12.49□□□□□ -0.41
RCBTB1-201ENST00000258646 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
RCBTB1-201ENST00000258646 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
RCBTB1-201ENST00000258646 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
RCBTB1-201ENST00000258646 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
RCBTB1-201ENST00000258646 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
RCBTB1-201ENST00000258646 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
RCBTB1-201ENST00000258646 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
RCBTB1-201ENST00000258646 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
RCBTB1-201ENST00000258646 ZNF777Q9ULD5 760 aaPredicted RBP12.35□□□□□ -0.43
RCBTB1-201ENST00000258646 NESP48681 1621 aa12.34□□□□□ -0.43
RCBTB1-201ENST00000258646 SOGA1O94964 1423 aa12.33□□□□□ -0.44
RCBTB1-201ENST00000258646 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
RCBTB1-201ENST00000258646 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
RCBTB1-201ENST00000258646 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
RCBTB1-201ENST00000258646 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
RCBTB1-201ENST00000258646 CUX2O14529 1486 aa12.31□□□□□ -0.44
RCBTB1-201ENST00000258646 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
RCBTB1-201ENST00000258646 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
RCBTB1-201ENST00000258646 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
RCBTB1-201ENST00000258646 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
RCBTB1-201ENST00000258646 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
RCBTB1-201ENST00000258646 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
RCBTB1-201ENST00000258646 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
RCBTB1-201ENST00000258646 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
RCBTB1-201ENST00000258646 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
RCBTB1-201ENST00000258646 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
RCBTB1-201ENST00000258646 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
RCBTB1-201ENST00000258646 PLEKHD1A6NEE1 506 aa12.14□□□□□ -0.47
RCBTB1-201ENST00000258646 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
RCBTB1-201ENST00000258646 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
RCBTB1-201ENST00000258646 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
RCBTB1-201ENST00000258646 TRIM26Q12899 539 aaPredicted RBP12.12□□□□□ -0.47
RCBTB1-201ENST00000258646 ESF1Q9H501 851 aaKnown RBP12.11□□□□□ -0.47
RCBTB1-201ENST00000258646 CFTRP13569 1480 aa12.1□□□□□ -0.47
RCBTB1-201ENST00000258646 CLIP1P30622 1438 aa12.09□□□□□ -0.47
RCBTB1-201ENST00000258646 HMGXB3Q12766 1538 aa12.08□□□□□ -0.48
RCBTB1-201ENST00000258646 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
RCBTB1-201ENST00000258646 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
RCBTB1-201ENST00000258646 EEA1Q15075 1411 aa12.07□□□□□ -0.48
RCBTB1-201ENST00000258646 FGD5Q6ZNL6 1462 aa12.06□□□□□ -0.48
RCBTB1-201ENST00000258646 GOLGA3Q08378 1498 aa12.03□□□□□ -0.48
RCBTB1-201ENST00000258646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.48
RCBTB1-201ENST00000258646 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
RCBTB1-201ENST00000258646 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.49
RCBTB1-201ENST00000258646 BCANQ96GW7 911 aa12.01□□□□□ -0.49
RCBTB1-201ENST00000258646 POLR3GLQ9BT43 218 aa12.01□□□□□ -0.49
RCBTB1-201ENST00000258646 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
RCBTB1-201ENST00000258646 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
RCBTB1-201ENST00000258646 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
RCBTB1-201ENST00000258646 RUSC2Q8N2Y8 1516 aa12□□□□□ -0.49
RCBTB1-201ENST00000258646 CARMIL2Q6F5E8 1435 aa11.98□□□□□ -0.49
RCBTB1-201ENST00000258646 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms