RNA–Protein interactions for RNA: ENST00000257981.6

KCNH3-201, Transcript of potassium voltage-gated channel subfamily H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNH3, Length 3,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH3-201ENST00000257981 NISCHQ9Y2I1 1504 aa30.33■■■□□ 2.45
KCNH3-201ENST00000257981 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
KCNH3-201ENST00000257981 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
KCNH3-201ENST00000257981 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
KCNH3-201ENST00000257981 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.83
KCNH3-201ENST00000257981 FAM9AQ8IZU1 332 aaPredicted RBP25.99■■□□□ 1.75
KCNH3-201ENST00000257981 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
KCNH3-201ENST00000257981 CHIC1Q5VXU3 224 aa25.59■■□□□ 1.69
KCNH3-201ENST00000257981 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
KCNH3-201ENST00000257981 ABCC9O60706 1549 aa25.48■■□□□ 1.67
KCNH3-201ENST00000257981 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
KCNH3-201ENST00000257981 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
KCNH3-201ENST00000257981 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
KCNH3-201ENST00000257981 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
KCNH3-201ENST00000257981 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
KCNH3-201ENST00000257981 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
KCNH3-201ENST00000257981 CCDC180Q9P1Z9 1646 aa24.93■■□□□ 1.58
KCNH3-201ENST00000257981 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
KCNH3-201ENST00000257981 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
KCNH3-201ENST00000257981 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
KCNH3-201ENST00000257981 HRCP23327 699 aa24.56■■□□□ 1.52
KCNH3-201ENST00000257981 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
KCNH3-201ENST00000257981 APLP2Q06481 763 aa24.5■■□□□ 1.51
KCNH3-201ENST00000257981 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
KCNH3-201ENST00000257981 RSF1Q96T23 1441 aaPredicted RBP24.29■■□□□ 1.48
KCNH3-201ENST00000257981 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
KCNH3-201ENST00000257981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
KCNH3-201ENST00000257981 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
KCNH3-201ENST00000257981 HNRNPUL2Q1KMD3 747 aaKnown RBP24.08■■□□□ 1.45
KCNH3-201ENST00000257981 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
KCNH3-201ENST00000257981 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
KCNH3-201ENST00000257981 ITGAEP38570 1179 aa23.98■■□□□ 1.43
KCNH3-201ENST00000257981 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
KCNH3-201ENST00000257981 NACADO15069 1562 aa23.81■■□□□ 1.4
KCNH3-201ENST00000257981 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
KCNH3-201ENST00000257981 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
KCNH3-201ENST00000257981 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
KCNH3-201ENST00000257981 P3H3Q8IVL6 736 aa23.58■■□□□ 1.36
KCNH3-201ENST00000257981 WIZO95785 1651 aa23.5■■□□□ 1.35
KCNH3-201ENST00000257981 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
KCNH3-201ENST00000257981 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
KCNH3-201ENST00000257981 SOGA1O94964 1423 aa23.4■■□□□ 1.34
KCNH3-201ENST00000257981 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
KCNH3-201ENST00000257981 FAM50AQ14320 339 aaKnown RBP23.34■■□□□ 1.33
KCNH3-201ENST00000257981 DIEXFQ68CQ4 756 aaKnown RBP23.34■■□□□ 1.33
KCNH3-201ENST00000257981 ARID3CA6NKF2 412 aa23.33■■□□□ 1.33
KCNH3-201ENST00000257981 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
KCNH3-201ENST00000257981 WRNQ14191 1432 aaPredicted RBP eCLIP23.28■■□□□ 1.32
KCNH3-201ENST00000257981 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
KCNH3-201ENST00000257981 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
KCNH3-201ENST00000257981 NEUROD1Q13562 356 aa23.17■■□□□ 1.3
KCNH3-201ENST00000257981 CLIP1P30622 1438 aa23.1■■□□□ 1.29
KCNH3-201ENST00000257981 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
KCNH3-201ENST00000257981 FBLN2P98095 1184 aa23.09■■□□□ 1.29
KCNH3-201ENST00000257981 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
KCNH3-201ENST00000257981 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
KCNH3-201ENST00000257981 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
KCNH3-201ENST00000257981 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
KCNH3-201ENST00000257981 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
KCNH3-201ENST00000257981 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
KCNH3-201ENST00000257981 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.26
KCNH3-201ENST00000257981 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
KCNH3-201ENST00000257981 TRIM52Q96A61 297 aa22.86■■□□□ 1.25
KCNH3-201ENST00000257981 EEA1Q15075 1411 aa22.86■■□□□ 1.25
KCNH3-201ENST00000257981 GTF3C3Q9Y5Q9 886 aa22.81■■□□□ 1.24
KCNH3-201ENST00000257981 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
KCNH3-201ENST00000257981 KANK4Q5T7N3 995 aaPredicted RBP22.78■■□□□ 1.24
KCNH3-201ENST00000257981 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
KCNH3-201ENST00000257981 HIRIP3Q9BW71 556 aaPredicted RBP22.74■■□□□ 1.23
KCNH3-201ENST00000257981 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
KCNH3-201ENST00000257981 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
KCNH3-201ENST00000257981 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
KCNH3-201ENST00000257981 CUX2O14529 1486 aa22.66■■□□□ 1.22
KCNH3-201ENST00000257981 ZNF777Q9ULD5 760 aaPredicted RBP22.66■■□□□ 1.22
KCNH3-201ENST00000257981 MIER1Q8N108 512 aa22.65■■□□□ 1.22
KCNH3-201ENST00000257981 MYT1LQ9UL68 1186 aa22.63■■□□□ 1.21
KCNH3-201ENST00000257981 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
KCNH3-201ENST00000257981 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
KCNH3-201ENST00000257981 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
KCNH3-201ENST00000257981 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
KCNH3-201ENST00000257981 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
KCNH3-201ENST00000257981 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
KCNH3-201ENST00000257981 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.19
KCNH3-201ENST00000257981 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
KCNH3-201ENST00000257981 BCANQ96GW7 911 aa22.5■■□□□ 1.19
KCNH3-201ENST00000257981 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
KCNH3-201ENST00000257981 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
KCNH3-201ENST00000257981 MTUS2Q5JR59 1369 aa22.48■■□□□ 1.19
KCNH3-201ENST00000257981 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
KCNH3-201ENST00000257981 NEFLP07196 543 aa22.44■■□□□ 1.18
KCNH3-201ENST00000257981 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
KCNH3-201ENST00000257981 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
KCNH3-201ENST00000257981 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
KCNH3-201ENST00000257981 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
KCNH3-201ENST00000257981 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
KCNH3-201ENST00000257981 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
KCNH3-201ENST00000257981 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
KCNH3-201ENST00000257981 ANP32CO43423 234 aa22.29■■□□□ 1.16
KCNH3-201ENST00000257981 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
KCNH3-201ENST00000257981 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms