RNA–Protein interactions for RNA: ENST00000256319.6

ERG28-201, Transcript of ergosterol biosynthesis 28 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERG28, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERG28-201ENST00000256319 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
ERG28-201ENST00000256319 CCDC180Q9P1Z9 1646 aa27.64■■■□□ 2.02
ERG28-201ENST00000256319 SHROOM4Q9ULL8 1493 aa27.63■■■□□ 2.01
ERG28-201ENST00000256319 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
ERG28-201ENST00000256319 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
ERG28-201ENST00000256319 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.9
ERG28-201ENST00000256319 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
ERG28-201ENST00000256319 ABCC9O60706 1549 aa26.14■■□□□ 1.78
ERG28-201ENST00000256319 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
ERG28-201ENST00000256319 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
ERG28-201ENST00000256319 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
ERG28-201ENST00000256319 HRCP23327 699 aa25.71■■□□□ 1.71
ERG28-201ENST00000256319 NACADO15069 1562 aa25.66■■□□□ 1.7
ERG28-201ENST00000256319 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.68
ERG28-201ENST00000256319 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
ERG28-201ENST00000256319 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
ERG28-201ENST00000256319 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
ERG28-201ENST00000256319 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
ERG28-201ENST00000256319 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.63
ERG28-201ENST00000256319 PELP1Q8IZL8 1130 aaKnown RBP25.16■■□□□ 1.62
ERG28-201ENST00000256319 PCGF6Q9BYE7 350 aa25.15■■□□□ 1.62
ERG28-201ENST00000256319 WIZO95785 1651 aa25.13■■□□□ 1.61
ERG28-201ENST00000256319 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
ERG28-201ENST00000256319 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
ERG28-201ENST00000256319 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
ERG28-201ENST00000256319 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
ERG28-201ENST00000256319 FAM9AQ8IZU1 332 aaPredicted RBP24.91■■□□□ 1.58
ERG28-201ENST00000256319 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
ERG28-201ENST00000256319 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
ERG28-201ENST00000256319 BICRAQ9NZM4 1560 aa24.74■■□□□ 1.55
ERG28-201ENST00000256319 TOP2AP11388 1531 aaKnown RBP24.64■■□□□ 1.53
ERG28-201ENST00000256319 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
ERG28-201ENST00000256319 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
ERG28-201ENST00000256319 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
ERG28-201ENST00000256319 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
ERG28-201ENST00000256319 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
ERG28-201ENST00000256319 MYT1Q01538 1121 aa24.26■■□□□ 1.47
ERG28-201ENST00000256319 TRIM26Q12899 539 aaPredicted RBP24.26■■□□□ 1.47
ERG28-201ENST00000256319 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
ERG28-201ENST00000256319 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
ERG28-201ENST00000256319 SOGA1O94964 1423 aa24.18■■□□□ 1.46
ERG28-201ENST00000256319 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
ERG28-201ENST00000256319 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
ERG28-201ENST00000256319 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
ERG28-201ENST00000256319 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
ERG28-201ENST00000256319 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
ERG28-201ENST00000256319 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
ERG28-201ENST00000256319 TTBK1Q5TCY1 1321 aaPredicted RBP23.9■■□□□ 1.42
ERG28-201ENST00000256319 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
ERG28-201ENST00000256319 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
ERG28-201ENST00000256319 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
ERG28-201ENST00000256319 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
ERG28-201ENST00000256319 EEA1Q15075 1411 aa23.78■■□□□ 1.4
ERG28-201ENST00000256319 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
ERG28-201ENST00000256319 NEUROD1Q13562 356 aa23.73■■□□□ 1.39
ERG28-201ENST00000256319 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
ERG28-201ENST00000256319 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
ERG28-201ENST00000256319 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
ERG28-201ENST00000256319 GTF3C3Q9Y5Q9 886 aa23.66■■□□□ 1.38
ERG28-201ENST00000256319 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
ERG28-201ENST00000256319 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
ERG28-201ENST00000256319 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
ERG28-201ENST00000256319 CUX1P39880 1505 aa23.54■■□□□ 1.36
ERG28-201ENST00000256319 KIF21BO75037 1637 aa23.53■■□□□ 1.36
ERG28-201ENST00000256319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.52■■□□□ 1.36
ERG28-201ENST00000256319 CFTRP13569 1480 aa23.52■■□□□ 1.36
ERG28-201ENST00000256319 CENPBP07199 599 aaPredicted RBP23.52■■□□□ 1.36
ERG28-201ENST00000256319 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
ERG28-201ENST00000256319 CLIP1P30622 1438 aa23.46■■□□□ 1.35
ERG28-201ENST00000256319 CC2D2AQ9P2K1 1620 aa23.46■■□□□ 1.35
ERG28-201ENST00000256319 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
ERG28-201ENST00000256319 CADPSQ9ULU8 1353 aa23.35■■□□□ 1.33
ERG28-201ENST00000256319 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
ERG28-201ENST00000256319 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
ERG28-201ENST00000256319 KIF27Q86VH2 1401 aa23.29■■□□□ 1.32
ERG28-201ENST00000256319 VPS8Q8N3P4 1428 aa23.28■■□□□ 1.32
ERG28-201ENST00000256319 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
ERG28-201ENST00000256319 CUX2O14529 1486 aa23.21■■□□□ 1.31
ERG28-201ENST00000256319 NESP48681 1621 aa23.2■■□□□ 1.3
ERG28-201ENST00000256319 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
ERG28-201ENST00000256319 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
ERG28-201ENST00000256319 APLP2Q06481 763 aa23.18■■□□□ 1.3
ERG28-201ENST00000256319 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
ERG28-201ENST00000256319 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
ERG28-201ENST00000256319 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
ERG28-201ENST00000256319 ARAP1Q96P48 1450 aa23.14■■□□□ 1.29
ERG28-201ENST00000256319 IGF1RP08069 1367 aa23.11■■□□□ 1.29
ERG28-201ENST00000256319 KANK4Q5T7N3 995 aaPredicted RBP23.05■■□□□ 1.28
ERG28-201ENST00000256319 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
ERG28-201ENST00000256319 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
ERG28-201ENST00000256319 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
ERG28-201ENST00000256319 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
ERG28-201ENST00000256319 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
ERG28-201ENST00000256319 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
ERG28-201ENST00000256319 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
ERG28-201ENST00000256319 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
ERG28-201ENST00000256319 URB2Q14146 1524 aaKnown RBP22.86■■□□□ 1.25
ERG28-201ENST00000256319 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
ERG28-201ENST00000256319 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
ERG28-201ENST00000256319 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms