RNA–Protein interactions for RNA: ENST00000256216.10

HSD17B4-201, Transcript of hydroxysteroid 17-beta dehydrogenase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSD17B4, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSD17B4-201ENST00000256216 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
HSD17B4-201ENST00000256216 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
HSD17B4-201ENST00000256216 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
HSD17B4-201ENST00000256216 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
HSD17B4-201ENST00000256216 DCAF8L2P0C7V8 631 aa23.73■■□□□ 1.39
HSD17B4-201ENST00000256216 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
HSD17B4-201ENST00000256216 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
HSD17B4-201ENST00000256216 ABCC9O60706 1549 aa23.18■■□□□ 1.3
HSD17B4-201ENST00000256216 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
HSD17B4-201ENST00000256216 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
HSD17B4-201ENST00000256216 NACADO15069 1562 aa22.85■■□□□ 1.25
HSD17B4-201ENST00000256216 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
HSD17B4-201ENST00000256216 HRCP23327 699 aa22.62■■□□□ 1.21
HSD17B4-201ENST00000256216 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
HSD17B4-201ENST00000256216 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
HSD17B4-201ENST00000256216 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
HSD17B4-201ENST00000256216 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
HSD17B4-201ENST00000256216 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
HSD17B4-201ENST00000256216 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
HSD17B4-201ENST00000256216 WIZO95785 1651 aa22.06■■□□□ 1.12
HSD17B4-201ENST00000256216 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
HSD17B4-201ENST00000256216 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
HSD17B4-201ENST00000256216 MYT1Q01538 1121 aa22.03■■□□□ 1.12
HSD17B4-201ENST00000256216 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
HSD17B4-201ENST00000256216 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.14e-6■■□□□ 12.8
HSD17B4-201ENST00000256216 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
HSD17B4-201ENST00000256216 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
HSD17B4-201ENST00000256216 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
HSD17B4-201ENST00000256216 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
HSD17B4-201ENST00000256216 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
HSD17B4-201ENST00000256216 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
HSD17B4-201ENST00000256216 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
HSD17B4-201ENST00000256216 EIF4G1Q04637 1599 aaKnown RBP21.64■■□□□ 1.05
HSD17B4-201ENST00000256216 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
HSD17B4-201ENST00000256216 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
HSD17B4-201ENST00000256216 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
HSD17B4-201ENST00000256216 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
HSD17B4-201ENST00000256216 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
HSD17B4-201ENST00000256216 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
HSD17B4-201ENST00000256216 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
HSD17B4-201ENST00000256216 EHMT2Q96KQ7 1210 aa21.28■■□□□ 1
HSD17B4-201ENST00000256216 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
HSD17B4-201ENST00000256216 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
HSD17B4-201ENST00000256216 SOGA1O94964 1423 aa21.14■□□□□ 0.97
HSD17B4-201ENST00000256216 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
HSD17B4-201ENST00000256216 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
HSD17B4-201ENST00000256216 EEA1Q15075 1411 aa21.05■□□□□ 0.96
HSD17B4-201ENST00000256216 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
HSD17B4-201ENST00000256216 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
HSD17B4-201ENST00000256216 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
HSD17B4-201ENST00000256216 CSRNP3Q8WYN3 585 aa21.02■□□□□ 0.96
HSD17B4-201ENST00000256216 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
HSD17B4-201ENST00000256216 TNIKQ9UKE5 1360 aa20.91■□□□□ 0.94
HSD17B4-201ENST00000256216 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
HSD17B4-201ENST00000256216 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
HSD17B4-201ENST00000256216 CFTRP13569 1480 aa20.85■□□□□ 0.93
HSD17B4-201ENST00000256216 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
HSD17B4-201ENST00000256216 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
HSD17B4-201ENST00000256216 GOLGA3Q08378 1498 aa20.83■□□□□ 0.93
HSD17B4-201ENST00000256216 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
HSD17B4-201ENST00000256216 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.92
HSD17B4-201ENST00000256216 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
HSD17B4-201ENST00000256216 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
HSD17B4-201ENST00000256216 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
HSD17B4-201ENST00000256216 KIF21BO75037 1637 aa20.74■□□□□ 0.91
HSD17B4-201ENST00000256216 CUX1P39880 1505 aa20.73■□□□□ 0.91
HSD17B4-201ENST00000256216 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
HSD17B4-201ENST00000256216 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
HSD17B4-201ENST00000256216 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
HSD17B4-201ENST00000256216 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
HSD17B4-201ENST00000256216 CLIP1P30622 1438 aa20.56■□□□□ 0.88
HSD17B4-201ENST00000256216 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
HSD17B4-201ENST00000256216 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
HSD17B4-201ENST00000256216 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
HSD17B4-201ENST00000256216 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
HSD17B4-201ENST00000256216 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
HSD17B4-201ENST00000256216 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
HSD17B4-201ENST00000256216 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
HSD17B4-201ENST00000256216 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
HSD17B4-201ENST00000256216 CUX2O14529 1486 aa20.41■□□□□ 0.86
HSD17B4-201ENST00000256216 NESP48681 1621 aa20.4■□□□□ 0.86
HSD17B4-201ENST00000256216 IGF1RP08069 1367 aa20.38■□□□□ 0.85
HSD17B4-201ENST00000256216 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
HSD17B4-201ENST00000256216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
HSD17B4-201ENST00000256216 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
HSD17B4-201ENST00000256216 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
HSD17B4-201ENST00000256216 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
HSD17B4-201ENST00000256216 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
HSD17B4-201ENST00000256216 APLP2Q06481 763 aa20.28■□□□□ 0.84
HSD17B4-201ENST00000256216 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
HSD17B4-201ENST00000256216 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
HSD17B4-201ENST00000256216 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
HSD17B4-201ENST00000256216 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
HSD17B4-201ENST00000256216 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
HSD17B4-201ENST00000256216 ARHGAP35Q9NRY4 1499 aa20.19■□□□□ 0.82
HSD17B4-201ENST00000256216 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
HSD17B4-201ENST00000256216 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
HSD17B4-201ENST00000256216 ANP32EQ9BTT0 268 aa20.13■□□□□ 0.81
HSD17B4-201ENST00000256216 KANK4Q5T7N3 995 aaPredicted RBP20.1■□□□□ 0.81
HSD17B4-201ENST00000256216 PRKCSHP14314 528 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms