RNA–Protein interactions for RNA: ENST00000245865.10

STRADA-201, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 1 (best) BASIC

Gene STRADA, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-201ENST00000245865 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.18
STRADA-201ENST00000245865 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
STRADA-201ENST00000245865 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
STRADA-201ENST00000245865 HRCP23327 699 aa19.44■□□□□ 0.7
STRADA-201ENST00000245865 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
STRADA-201ENST00000245865 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.68
STRADA-201ENST00000245865 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
STRADA-201ENST00000245865 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
STRADA-201ENST00000245865 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
STRADA-201ENST00000245865 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
STRADA-201ENST00000245865 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
STRADA-201ENST00000245865 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
STRADA-201ENST00000245865 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.55
STRADA-201ENST00000245865 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
STRADA-201ENST00000245865 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
STRADA-201ENST00000245865 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
STRADA-201ENST00000245865 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
STRADA-201ENST00000245865 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.5
STRADA-201ENST00000245865 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
STRADA-201ENST00000245865 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
STRADA-201ENST00000245865 ABCC9O60706 1549 aa17.98■□□□□ 0.47
STRADA-201ENST00000245865 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
STRADA-201ENST00000245865 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
STRADA-201ENST00000245865 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
STRADA-201ENST00000245865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
STRADA-201ENST00000245865 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
STRADA-201ENST00000245865 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.44
STRADA-201ENST00000245865 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
STRADA-201ENST00000245865 DIEXFQ68CQ4 756 aaKnown RBP17.75■□□□□ 0.43
STRADA-201ENST00000245865 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
STRADA-201ENST00000245865 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
STRADA-201ENST00000245865 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
STRADA-201ENST00000245865 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
STRADA-201ENST00000245865 MYT1Q01538 1121 aa17.65■□□□□ 0.42
STRADA-201ENST00000245865 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
STRADA-201ENST00000245865 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
STRADA-201ENST00000245865 NACADO15069 1562 aa17.48■□□□□ 0.39
STRADA-201ENST00000245865 WIZO95785 1651 aa17.44■□□□□ 0.38
STRADA-201ENST00000245865 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
STRADA-201ENST00000245865 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
STRADA-201ENST00000245865 MIER1Q8N108 512 aa17.33■□□□□ 0.36
STRADA-201ENST00000245865 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
STRADA-201ENST00000245865 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
STRADA-201ENST00000245865 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
STRADA-201ENST00000245865 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
STRADA-201ENST00000245865 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
STRADA-201ENST00000245865 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
STRADA-201ENST00000245865 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
STRADA-201ENST00000245865 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
STRADA-201ENST00000245865 SOGA1O94964 1423 aa17.02■□□□□ 0.32
STRADA-201ENST00000245865 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.31
STRADA-201ENST00000245865 RANGAP1P46060 587 aaPredicted RBP16.99■□□□□ 0.31
STRADA-201ENST00000245865 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
STRADA-201ENST00000245865 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
STRADA-201ENST00000245865 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
STRADA-201ENST00000245865 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
STRADA-201ENST00000245865 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
STRADA-201ENST00000245865 TNIKQ9UKE5 1360 aa16.95■□□□□ 0.3
STRADA-201ENST00000245865 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
STRADA-201ENST00000245865 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
STRADA-201ENST00000245865 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
STRADA-201ENST00000245865 ANP32EQ9BTT0 268 aa16.84■□□□□ 0.29
STRADA-201ENST00000245865 BCANQ96GW7 911 aa16.83■□□□□ 0.28
STRADA-201ENST00000245865 APLP2Q06481 763 aa16.8■□□□□ 0.28
STRADA-201ENST00000245865 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
STRADA-201ENST00000245865 GOLGA3Q08378 1498 aa16.76■□□□□ 0.27
STRADA-201ENST00000245865 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
STRADA-201ENST00000245865 CLSPNQ9HAW4 1339 aa16.71■□□□□ 0.27
STRADA-201ENST00000245865 CLIP1P30622 1438 aa16.69■□□□□ 0.26
STRADA-201ENST00000245865 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
STRADA-201ENST00000245865 EEA1Q15075 1411 aa16.67■□□□□ 0.26
STRADA-201ENST00000245865 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
STRADA-201ENST00000245865 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
STRADA-201ENST00000245865 FKBP8Q14318 412 aa16.63■□□□□ 0.25
STRADA-201ENST00000245865 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
STRADA-201ENST00000245865 VPS8Q8N3P4 1428 aa16.61■□□□□ 0.25
STRADA-201ENST00000245865 ITGAEP38570 1179 aa16.59■□□□□ 0.25
STRADA-201ENST00000245865 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
STRADA-201ENST00000245865 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
STRADA-201ENST00000245865 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
STRADA-201ENST00000245865 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
STRADA-201ENST00000245865 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
STRADA-201ENST00000245865 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
STRADA-201ENST00000245865 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
STRADA-201ENST00000245865 KIF21BO75037 1637 aa16.45■□□□□ 0.22
STRADA-201ENST00000245865 NEFLP07196 543 aa16.45■□□□□ 0.22
STRADA-201ENST00000245865 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
STRADA-201ENST00000245865 MSH5O43196 834 aa16.36■□□□□ 0.21
STRADA-201ENST00000245865 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
STRADA-201ENST00000245865 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
STRADA-201ENST00000245865 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
STRADA-201ENST00000245865 CUX1P39880 1505 aa16.29■□□□□ 0.2
STRADA-201ENST00000245865 RAB3GAP2Q9H2M9 1393 aa16.28■□□□□ 0.2
STRADA-201ENST00000245865 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
STRADA-201ENST00000245865 CCNB3Q8WWL7 1395 aa16.28■□□□□ 0.2
STRADA-201ENST00000245865 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
STRADA-201ENST00000245865 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
STRADA-201ENST00000245865 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
STRADA-201ENST00000245865 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
STRADA-201ENST00000245865 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms