RNA–Protein interactions for RNA: ENST00000245046.6

EMC3-201, Transcript of ER membrane protein complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EMC3, Length 2,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3-201ENST00000245046 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
EMC3-201ENST00000245046 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.35
EMC3-201ENST00000245046 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
EMC3-201ENST00000245046 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
EMC3-201ENST00000245046 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
EMC3-201ENST00000245046 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
EMC3-201ENST00000245046 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
EMC3-201ENST00000245046 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
EMC3-201ENST00000245046 ABCC9O60706 1549 aa16.16■□□□□ 0.18
EMC3-201ENST00000245046 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
EMC3-201ENST00000245046 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
EMC3-201ENST00000245046 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
EMC3-201ENST00000245046 LOC105371045A0A1W2PR82 267 aa15.84■□□□□ 0.13
EMC3-201ENST00000245046 HRCP23327 699 aa15.8■□□□□ 0.12
EMC3-201ENST00000245046 NACADO15069 1562 aa15.78■□□□□ 0.12
EMC3-201ENST00000245046 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
EMC3-201ENST00000245046 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
EMC3-201ENST00000245046 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
EMC3-201ENST00000245046 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
EMC3-201ENST00000245046 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
EMC3-201ENST00000245046 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
EMC3-201ENST00000245046 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
EMC3-201ENST00000245046 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
EMC3-201ENST00000245046 WIZO95785 1651 aa15.47■□□□□ 0.07
EMC3-201ENST00000245046 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
EMC3-201ENST00000245046 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
EMC3-201ENST00000245046 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
EMC3-201ENST00000245046 TRIM26Q12899 539 aaPredicted RBP15.27■□□□□ 0.04
EMC3-201ENST00000245046 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
EMC3-201ENST00000245046 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
EMC3-201ENST00000245046 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
EMC3-201ENST00000245046 TOP2AP11388 1531 aaKnown RBP15.16■□□□□ 0.02
EMC3-201ENST00000245046 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
EMC3-201ENST00000245046 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
EMC3-201ENST00000245046 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
EMC3-201ENST00000245046 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
EMC3-201ENST00000245046 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
EMC3-201ENST00000245046 SOGA1O94964 1423 aa15.02■□□□□ -0
EMC3-201ENST00000245046 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
EMC3-201ENST00000245046 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
EMC3-201ENST00000245046 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
EMC3-201ENST00000245046 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
EMC3-201ENST00000245046 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
EMC3-201ENST00000245046 RUSC2Q8N2Y8 1516 aa14.94□□□□□ -0.02
EMC3-201ENST00000245046 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
EMC3-201ENST00000245046 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
EMC3-201ENST00000245046 RANGAP1P46060 587 aaPredicted RBP14.91□□□□□ -0.02
EMC3-201ENST00000245046 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
EMC3-201ENST00000245046 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
EMC3-201ENST00000245046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
EMC3-201ENST00000245046 MYT1Q01538 1121 aa14.81□□□□□ -0.04
EMC3-201ENST00000245046 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
EMC3-201ENST00000245046 EEA1Q15075 1411 aa14.77□□□□□ -0.05
EMC3-201ENST00000245046 CCER1Q8TC90 406 aaPredicted RBP14.76□□□□□ -0.05
EMC3-201ENST00000245046 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
EMC3-201ENST00000245046 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
EMC3-201ENST00000245046 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
EMC3-201ENST00000245046 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
EMC3-201ENST00000245046 APLP2Q06481 763 aa14.64□□□□□ -0.07
EMC3-201ENST00000245046 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
EMC3-201ENST00000245046 CLIP1P30622 1438 aa14.61□□□□□ -0.07
EMC3-201ENST00000245046 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
EMC3-201ENST00000245046 ACIN1Q9UKV3 1341 aaKnown RBP14.58□□□□□ -0.08
EMC3-201ENST00000245046 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
EMC3-201ENST00000245046 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
EMC3-201ENST00000245046 NEUROD1Q13562 356 aa14.52□□□□□ -0.08
EMC3-201ENST00000245046 CFTRP13569 1480 aa14.52□□□□□ -0.09
EMC3-201ENST00000245046 CUX1P39880 1505 aa14.5□□□□□ -0.09
EMC3-201ENST00000245046 KIF21BO75037 1637 aa14.5□□□□□ -0.09
EMC3-201ENST00000245046 KIF27Q86VH2 1401 aa14.47□□□□□ -0.09
EMC3-201ENST00000245046 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
EMC3-201ENST00000245046 CADPSQ9ULU8 1353 aa14.46□□□□□ -0.09
EMC3-201ENST00000245046 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
EMC3-201ENST00000245046 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
EMC3-201ENST00000245046 PRXQ9BXM0 1461 aa14.42□□□□□ -0.1
EMC3-201ENST00000245046 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
EMC3-201ENST00000245046 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
EMC3-201ENST00000245046 KANK4Q5T7N3 995 aaPredicted RBP14.4□□□□□ -0.1
EMC3-201ENST00000245046 CUX2O14529 1486 aa14.4□□□□□ -0.1
EMC3-201ENST00000245046 DIEXFQ68CQ4 756 aaKnown RBP14.38□□□□□ -0.11
EMC3-201ENST00000245046 P3H3Q8IVL6 736 aa14.37□□□□□ -0.11
EMC3-201ENST00000245046 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
EMC3-201ENST00000245046 ITGAEP38570 1179 aa14.35□□□□□ -0.11
EMC3-201ENST00000245046 IGF1RP08069 1367 aa14.35□□□□□ -0.11
EMC3-201ENST00000245046 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
EMC3-201ENST00000245046 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
EMC3-201ENST00000245046 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
EMC3-201ENST00000245046 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
EMC3-201ENST00000245046 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
EMC3-201ENST00000245046 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
EMC3-201ENST00000245046 NESP48681 1621 aa14.31□□□□□ -0.12
EMC3-201ENST00000245046 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
EMC3-201ENST00000245046 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
EMC3-201ENST00000245046 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
EMC3-201ENST00000245046 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
EMC3-201ENST00000245046 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
EMC3-201ENST00000245046 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
EMC3-201ENST00000245046 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
EMC3-201ENST00000245046 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
EMC3-201ENST00000245046 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms