RNA–Protein interactions for RNA: ENST00000240123.11

SORBS3-201, Transcript of sorbin and SH3 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORBS3, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-201ENST00000240123 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
SORBS3-201ENST00000240123 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
SORBS3-201ENST00000240123 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
SORBS3-201ENST00000240123 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
SORBS3-201ENST00000240123 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
SORBS3-201ENST00000240123 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
SORBS3-201ENST00000240123 HRCP23327 699 aa19.74■□□□□ 0.75
SORBS3-201ENST00000240123 PELP1Q8IZL8 1130 aaKnown RBP19.4■□□□□ 0.7
SORBS3-201ENST00000240123 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
SORBS3-201ENST00000240123 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
SORBS3-201ENST00000240123 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
SORBS3-201ENST00000240123 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
SORBS3-201ENST00000240123 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
SORBS3-201ENST00000240123 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
SORBS3-201ENST00000240123 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
SORBS3-201ENST00000240123 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
SORBS3-201ENST00000240123 MYT1Q01538 1121 aa18.64■□□□□ 0.57
SORBS3-201ENST00000240123 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
SORBS3-201ENST00000240123 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
SORBS3-201ENST00000240123 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
SORBS3-201ENST00000240123 ABCC9O60706 1549 aa18.56■□□□□ 0.56
SORBS3-201ENST00000240123 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
SORBS3-201ENST00000240123 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
SORBS3-201ENST00000240123 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
SORBS3-201ENST00000240123 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
SORBS3-201ENST00000240123 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
SORBS3-201ENST00000240123 ACIN1Q9UKV3 1341 aaKnown RBP18.44■□□□□ 0.54
SORBS3-201ENST00000240123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
SORBS3-201ENST00000240123 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
SORBS3-201ENST00000240123 DIEXFQ68CQ4 756 aaKnown RBP18.27■□□□□ 0.52
SORBS3-201ENST00000240123 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.54e-7■■■□□ 16.2
SORBS3-201ENST00000240123 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
SORBS3-201ENST00000240123 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
SORBS3-201ENST00000240123 BCANQ96GW7 911 aa17.91■□□□□ 0.46
SORBS3-201ENST00000240123 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
SORBS3-201ENST00000240123 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
SORBS3-201ENST00000240123 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
SORBS3-201ENST00000240123 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
SORBS3-201ENST00000240123 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
SORBS3-201ENST00000240123 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
SORBS3-201ENST00000240123 MIER1Q8N108 512 aa17.71■□□□□ 0.43
SORBS3-201ENST00000240123 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
SORBS3-201ENST00000240123 APLP2Q06481 763 aa17.62■□□□□ 0.41
SORBS3-201ENST00000240123 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
SORBS3-201ENST00000240123 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
SORBS3-201ENST00000240123 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
SORBS3-201ENST00000240123 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
SORBS3-201ENST00000240123 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
SORBS3-201ENST00000240123 ITGAEP38570 1179 aa17.44■□□□□ 0.38
SORBS3-201ENST00000240123 NACADO15069 1562 aa17.4■□□□□ 0.38
SORBS3-201ENST00000240123 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
SORBS3-201ENST00000240123 NEFLP07196 543 aa17.36■□□□□ 0.37
SORBS3-201ENST00000240123 FKBP8Q14318 412 aa17.33■□□□□ 0.37
SORBS3-201ENST00000240123 TSHZ2Q9NRE2 1034 aa17.33■□□□□ 0.36
SORBS3-201ENST00000240123 WIZO95785 1651 aa17.29■□□□□ 0.36
SORBS3-201ENST00000240123 ATP1B4Q9UN42 357 aaPredicted RBP17.26■□□□□ 0.35
SORBS3-201ENST00000240123 PRKCSHP14314 528 aaPredicted RBP17.17■□□□□ 0.34
SORBS3-201ENST00000240123 IRX6P78412 446 aaPredicted RBP17.15■□□□□ 0.34
SORBS3-201ENST00000240123 NBR1Q14596 966 aa17.14■□□□□ 0.33
SORBS3-201ENST00000240123 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
SORBS3-201ENST00000240123 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
SORBS3-201ENST00000240123 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
SORBS3-201ENST00000240123 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
SORBS3-201ENST00000240123 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
SORBS3-201ENST00000240123 SOGA1O94964 1423 aa17.08■□□□□ 0.32
SORBS3-201ENST00000240123 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
SORBS3-201ENST00000240123 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
SORBS3-201ENST00000240123 RBM19Q9Y4C8 960 aaKnown RBP17.06■□□□□ 0.32
SORBS3-201ENST00000240123 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
SORBS3-201ENST00000240123 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
SORBS3-201ENST00000240123 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
SORBS3-201ENST00000240123 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
SORBS3-201ENST00000240123 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
SORBS3-201ENST00000240123 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
SORBS3-201ENST00000240123 RUSC2Q8N2Y8 1516 aa16.94■□□□□ 0.3
SORBS3-201ENST00000240123 ANO8Q9HCE9 1232 aaPredicted RBP16.94■□□□□ 0.3
SORBS3-201ENST00000240123 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
SORBS3-201ENST00000240123 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
SORBS3-201ENST00000240123 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
SORBS3-201ENST00000240123 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
SORBS3-201ENST00000240123 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
SORBS3-201ENST00000240123 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
SORBS3-201ENST00000240123 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
SORBS3-201ENST00000240123 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
SORBS3-201ENST00000240123 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
SORBS3-201ENST00000240123 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
SORBS3-201ENST00000240123 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
SORBS3-201ENST00000240123 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
SORBS3-201ENST00000240123 CLIP1P30622 1438 aa16.77■□□□□ 0.28
SORBS3-201ENST00000240123 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
SORBS3-201ENST00000240123 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
SORBS3-201ENST00000240123 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
SORBS3-201ENST00000240123 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
SORBS3-201ENST00000240123 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
SORBS3-201ENST00000240123 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
SORBS3-201ENST00000240123 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
SORBS3-201ENST00000240123 MSH5O43196 834 aa16.72■□□□□ 0.27
SORBS3-201ENST00000240123 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.27
SORBS3-201ENST00000240123 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
SORBS3-201ENST00000240123 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms