RNA–Protein interactions for RNA: ENST00000227378.7

HSPA8-201, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA8, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-201ENST00000227378 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.49□□□□□ -0.575e-76■□□□□ 9.6
HSPA8-201ENST00000227378 DDX21Q9NR30 783 aaKnown RBP eCLIP14.96□□□□□ -0.012e-70■■□□□ 12.7
HSPA8-201ENST00000227378 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.175e-66■□□□□ 10.9
HSPA8-201ENST00000227378 DKC1O60832 514 aaKnown RBP eCLIP13.18□□□□□ -0.31e-61■□□□□ 10.4
HSPA8-201ENST00000227378 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.5□□□□□ -0.573e-47■□□□□ 11.2
HSPA8-201ENST00000227378 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.051e-45■■■■□ 25.2
HSPA8-201ENST00000227378 TROVE2P10155 538 aaKnown RBP eCLIP12.22□□□□□ -0.454e-40■□□□□ 10
HSPA8-201ENST00000227378 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.151e-38■■■□□ 19.2
HSPA8-201ENST00000227378 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.695e-37■□□□□ 10.7
HSPA8-201ENST00000227378 SMNDC1O75940 238 aaKnown RBP eCLIP11.6□□□□□ -0.553e-35■■■■■ 27.3
HSPA8-201ENST00000227378 TRA2AQ13595 282 aaKnown RBP eCLIP10.96□□□□□ -0.651e-32■■■■■ 68.5
HSPA8-201ENST00000227378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.04□□□□□ -0.485e-27■□□□□ 10.8
HSPA8-201ENST00000227378 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.342e-26■□□□□ 8.9
HSPA8-201ENST00000227378 DDX3XO00571 662 aaKnown RBP eCLIP13.07□□□□□ -0.322e-26■□□□□ 9.7
HSPA8-201ENST00000227378 NIP7Q9Y221 180 aaKnown RBP eCLIP14.49□□□□□ -0.093e-26■□□□□ 9.3
HSPA8-201ENST00000227378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.281e-23■■□□□ 11.8
HSPA8-201ENST00000227378 SND1Q7KZF4 910 aaKnown RBP eCLIP12.86□□□□□ -0.351e-21■■□□□ 13.8
HSPA8-201ENST00000227378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.9□□□□□ -0.662e-16■■□□□ 12.1
HSPA8-201ENST00000227378 ZNF622Q969S3 477 aaKnown RBP eCLIP14.06□□□□□ -0.164e-16■□□□□ 8.7
HSPA8-201ENST00000227378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.42□□□□□ -0.265e-16■■■□□ 16.2
HSPA8-201ENST00000227378 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.55□□□□□ -0.569e-16■■■□□ 15.3
HSPA8-201ENST00000227378 EIF3DO15371 548 aaKnown RBP eCLIP13.27□□□□□ -0.283e-15■□□□□ 8.3
HSPA8-201ENST00000227378 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.236e-15■□□□□ 11.3
HSPA8-201ENST00000227378 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.411e-13■■■■■ 38.9
HSPA8-201ENST00000227378 FMR1Q06787 632 aaKnown RBP eCLIP13.65□□□□□ -0.225e-12■■■□□ 15.7
HSPA8-201ENST00000227378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.434e-11■■■□□ 18.4
HSPA8-201ENST00000227378 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.187e-11■■■■□ 20.6
HSPA8-201ENST00000227378 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.237e-11■■■■□ 25.5
HSPA8-201ENST00000227378 RPS3P23396 243 aaKnown RBP eCLIP11.92□□□□□ -0.59e-11■■■■□ 25.1
HSPA8-201ENST00000227378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.76□□□□□ -0.371e-10■■■■■ 47.2
HSPA8-201ENST00000227378 U2AF1Q01081 240 aaKnown RBP eCLIP15.86■□□□□ 0.135e-10■□□□□ 10.8
HSPA8-201ENST00000227378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.15□□□□□ -0.477e-10■□□□□ 10.3
HSPA8-201ENST00000227378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.432e-9■■□□□ 13.3
HSPA8-201ENST00000227378 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.242e-9■■□□□ 13.7
HSPA8-201ENST00000227378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.323e-9■■■■□ 26.7
HSPA8-201ENST00000227378 NIPBLQ6KC79 2804 aaeCLIP8.8□□□□□ -13e-9■■■■□ 19.3
HSPA8-201ENST00000227378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.38□□□□□ -0.911e-8■■■■■ 44.3
HSPA8-201ENST00000227378 CDC40O60508 579 aaKnown RBP eCLIP10.97□□□□□ -0.652e-8■■□□□ 13.2
HSPA8-201ENST00000227378 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.052e-8■■■□□ 16.7
HSPA8-201ENST00000227378 FXR1P51114 621 aaKnown RBP eCLIP13.41□□□□□ -0.262e-8■■■□□ 16.6
HSPA8-201ENST00000227378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.05■□□□□ 03e-8■■■■□ 22.2
HSPA8-201ENST00000227378 PUM1Q14671 1186 aaKnown RBP eCLIP11.35□□□□□ -0.593e-8■□□□□ 10.6
HSPA8-201ENST00000227378 EIF3HO15372 352 aaKnown RBP eCLIP12.55□□□□□ -0.46e-8■□□□□ 9.5
HSPA8-201ENST00000227378 LARP4Q71RC2 724 aaKnown RBP eCLIP11.89□□□□□ -0.517e-8■■□□□ 14
HSPA8-201ENST00000227378 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.588e-8■■■■□ 22.5
HSPA8-201ENST00000227378 SLBPQ14493 270 aaKnown RBP eCLIP11.65□□□□□ -0.548e-8■□□□□ 9
HSPA8-201ENST00000227378 RBM15Q96T37 977 aaKnown RBP eCLIP12.57□□□□□ -0.49e-8■■■■□ 26.5
HSPA8-201ENST00000227378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■□□□□ 10
HSPA8-201ENST00000227378 SF3B4Q15427 424 aaKnown RBP eCLIP10.46□□□□□ -0.742e-7■■■■□ 24.8
HSPA8-201ENST00000227378 FTOQ9C0B1 505 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■□□□□ 8.6
HSPA8-201ENST00000227378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■□□□□ 9
HSPA8-201ENST00000227378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.47■□□□□ 0.394e-7■□□□□ 11.1
HSPA8-201ENST00000227378 DDX6P26196 483 aaKnown RBP eCLIP12.01□□□□□ -0.496e-7■■■□□ 17.1
HSPA8-201ENST00000227378 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.867e-7■□□□□ 11.3
HSPA8-201ENST00000227378 SF3B1O75533 1304 aaKnown RBP eCLIP12.43□□□□□ -0.429e-7■■■■■ 57.4
HSPA8-201ENST00000227378 RBM22Q9NW64 420 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■■■■ 34.9
HSPA8-201ENST00000227378 METAP2P50579 478 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■□□□□ 11.2
HSPA8-201ENST00000227378 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■□□□□ 10.9
HSPA8-201ENST00000227378 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.8□□□□□ -0.363e-6■□□□□ 10.3
HSPA8-201ENST00000227378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■■■ 38.3
HSPA8-201ENST00000227378 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.323e-6■■■■□ 24.5
HSPA8-201ENST00000227378 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.99□□□□□ -0.494e-6■■■■■ 48.1
HSPA8-201ENST00000227378 PRPF4O43172 522 aaKnown RBP eCLIP12.37□□□□□ -0.435e-6■□□□□ 10.2
Retrieved 63 of 63 RNA–protein pairs in 662.4 ms