RNA–Protein interactions for RNA: ENST00000226094.9

FAM20A-201, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, humanhuman

TSL 1 (best)

Gene FAM20A, Length 3,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20A-201ENST00000226094 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
FAM20A-201ENST00000226094 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
FAM20A-201ENST00000226094 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
FAM20A-201ENST00000226094 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
FAM20A-201ENST00000226094 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
FAM20A-201ENST00000226094 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
FAM20A-201ENST00000226094 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
FAM20A-201ENST00000226094 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.36
FAM20A-201ENST00000226094 CHIC1Q5VXU3 224 aa12.7□□□□□ -0.38
FAM20A-201ENST00000226094 ABCC9O60706 1549 aa12.6□□□□□ -0.39
FAM20A-201ENST00000226094 SCRIBQ14160 1630 aa12.54□□□□□ -0.4
FAM20A-201ENST00000226094 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.41
FAM20A-201ENST00000226094 RB1CC1Q8TDY2 1594 aa12.38□□□□□ -0.43
FAM20A-201ENST00000226094 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
FAM20A-201ENST00000226094 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
FAM20A-201ENST00000226094 NACADO15069 1562 aa12.32□□□□□ -0.44
FAM20A-201ENST00000226094 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
FAM20A-201ENST00000226094 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
FAM20A-201ENST00000226094 WIZO95785 1651 aa12.24□□□□□ -0.45
FAM20A-201ENST00000226094 HRCP23327 699 aa12.2□□□□□ -0.46
FAM20A-201ENST00000226094 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
FAM20A-201ENST00000226094 PCGF6Q9BYE7 350 aa12.18□□□□□ -0.46
FAM20A-201ENST00000226094 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
FAM20A-201ENST00000226094 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
FAM20A-201ENST00000226094 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
FAM20A-201ENST00000226094 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
FAM20A-201ENST00000226094 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
FAM20A-201ENST00000226094 BICRAQ9NZM4 1560 aa11.99□□□□□ -0.49
FAM20A-201ENST00000226094 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
FAM20A-201ENST00000226094 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
FAM20A-201ENST00000226094 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.5
FAM20A-201ENST00000226094 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
FAM20A-201ENST00000226094 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
FAM20A-201ENST00000226094 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
FAM20A-201ENST00000226094 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
FAM20A-201ENST00000226094 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
FAM20A-201ENST00000226094 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
FAM20A-201ENST00000226094 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
FAM20A-201ENST00000226094 SOGA1O94964 1423 aa11.79□□□□□ -0.52
FAM20A-201ENST00000226094 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
FAM20A-201ENST00000226094 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
FAM20A-201ENST00000226094 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
FAM20A-201ENST00000226094 CEP162Q5TB80 1403 aa11.64□□□□□ -0.55
FAM20A-201ENST00000226094 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
FAM20A-201ENST00000226094 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
FAM20A-201ENST00000226094 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
FAM20A-201ENST00000226094 EEA1Q15075 1411 aa11.54□□□□□ -0.56
FAM20A-201ENST00000226094 KIF21BO75037 1637 aa11.53□□□□□ -0.56
FAM20A-201ENST00000226094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
FAM20A-201ENST00000226094 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
FAM20A-201ENST00000226094 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
FAM20A-201ENST00000226094 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
FAM20A-201ENST00000226094 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
FAM20A-201ENST00000226094 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
FAM20A-201ENST00000226094 TTBK1Q5TCY1 1321 aaPredicted RBP11.47□□□□□ -0.57
FAM20A-201ENST00000226094 CEP164Q9UPV0 1460 aa11.44□□□□□ -0.58
FAM20A-201ENST00000226094 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
FAM20A-201ENST00000226094 CUX1P39880 1505 aa11.44□□□□□ -0.58
FAM20A-201ENST00000226094 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
FAM20A-201ENST00000226094 CLIP1P30622 1438 aa11.4□□□□□ -0.58
FAM20A-201ENST00000226094 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
FAM20A-201ENST00000226094 PRXQ9BXM0 1461 aa11.39□□□□□ -0.59
FAM20A-201ENST00000226094 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
FAM20A-201ENST00000226094 CFTRP13569 1480 aa11.36□□□□□ -0.59
FAM20A-201ENST00000226094 ARAP1Q96P48 1450 aa11.35□□□□□ -0.59
FAM20A-201ENST00000226094 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
FAM20A-201ENST00000226094 ERICH3Q5RHP9 1530 aa11.32□□□□□ -0.6
FAM20A-201ENST00000226094 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
FAM20A-201ENST00000226094 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
FAM20A-201ENST00000226094 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
FAM20A-201ENST00000226094 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
FAM20A-201ENST00000226094 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
FAM20A-201ENST00000226094 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
FAM20A-201ENST00000226094 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
FAM20A-201ENST00000226094 IGF1RP08069 1367 aa11.19□□□□□ -0.62
FAM20A-201ENST00000226094 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
FAM20A-201ENST00000226094 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
FAM20A-201ENST00000226094 FGD5Q6ZNL6 1462 aa11.16□□□□□ -0.62
FAM20A-201ENST00000226094 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
FAM20A-201ENST00000226094 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
FAM20A-201ENST00000226094 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
FAM20A-201ENST00000226094 CUX2O14529 1486 aa11.14□□□□□ -0.63
FAM20A-201ENST00000226094 DHX57Q6P158 1386 aaKnown RBP11.12□□□□□ -0.63
FAM20A-201ENST00000226094 NESP48681 1621 aa11.11□□□□□ -0.63
FAM20A-201ENST00000226094 RAD54L2Q9Y4B4 1467 aa11.09□□□□□ -0.63
FAM20A-201ENST00000226094 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.63
FAM20A-201ENST00000226094 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
FAM20A-201ENST00000226094 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
FAM20A-201ENST00000226094 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
FAM20A-201ENST00000226094 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
FAM20A-201ENST00000226094 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
FAM20A-201ENST00000226094 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
FAM20A-201ENST00000226094 CARMIL1Q5VZK9 1371 aa11.05□□□□□ -0.64
FAM20A-201ENST00000226094 DNMBPQ6XZF7 1577 aa11.05□□□□□ -0.64
FAM20A-201ENST00000226094 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
FAM20A-201ENST00000226094 PCF11O94913 1555 aaKnown RBP11.04□□□□□ -0.64
FAM20A-201ENST00000226094 MAPKBP1O60336 1514 aa11.04□□□□□ -0.64
FAM20A-201ENST00000226094 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
FAM20A-201ENST00000226094 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
FAM20A-201ENST00000226094 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms