RNA–Protein interactions for RNA: ENST00000216187.10

FOXRED2-201, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 3,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-201ENST00000216187 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
FOXRED2-201ENST00000216187 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
FOXRED2-201ENST00000216187 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
FOXRED2-201ENST00000216187 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
FOXRED2-201ENST00000216187 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
FOXRED2-201ENST00000216187 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
FOXRED2-201ENST00000216187 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
FOXRED2-201ENST00000216187 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
FOXRED2-201ENST00000216187 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
FOXRED2-201ENST00000216187 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
FOXRED2-201ENST00000216187 HRCP23327 699 aa23.6■■□□□ 1.37
FOXRED2-201ENST00000216187 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
FOXRED2-201ENST00000216187 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
FOXRED2-201ENST00000216187 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
FOXRED2-201ENST00000216187 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
FOXRED2-201ENST00000216187 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
FOXRED2-201ENST00000216187 YTHDC1Q96MU7 727 aaKnown RBP22.9■■□□□ 1.26
FOXRED2-201ENST00000216187 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
FOXRED2-201ENST00000216187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
FOXRED2-201ENST00000216187 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
FOXRED2-201ENST00000216187 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
FOXRED2-201ENST00000216187 APLP2Q06481 763 aa22.64■■□□□ 1.22
FOXRED2-201ENST00000216187 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
FOXRED2-201ENST00000216187 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
FOXRED2-201ENST00000216187 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
FOXRED2-201ENST00000216187 ABCC9O60706 1549 aa22.32■■□□□ 1.16
FOXRED2-201ENST00000216187 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
FOXRED2-201ENST00000216187 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
FOXRED2-201ENST00000216187 GTF3C3Q9Y5Q9 886 aa22.24■■□□□ 1.15
FOXRED2-201ENST00000216187 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
FOXRED2-201ENST00000216187 ITGAEP38570 1179 aa22.17■■□□□ 1.14
FOXRED2-201ENST00000216187 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
FOXRED2-201ENST00000216187 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
FOXRED2-201ENST00000216187 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
FOXRED2-201ENST00000216187 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
FOXRED2-201ENST00000216187 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
FOXRED2-201ENST00000216187 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.09
FOXRED2-201ENST00000216187 BCANQ96GW7 911 aa21.74■■□□□ 1.07
FOXRED2-201ENST00000216187 ZNF316A6NFI3 1004 aaPredicted RBP21.72■■□□□ 1.07
FOXRED2-201ENST00000216187 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
FOXRED2-201ENST00000216187 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
FOXRED2-201ENST00000216187 NEFLP07196 543 aa21.66■■□□□ 1.06
FOXRED2-201ENST00000216187 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
FOXRED2-201ENST00000216187 MYT1Q01538 1121 aa21.55■■□□□ 1.04
FOXRED2-201ENST00000216187 CSRNP3Q8WYN3 585 aa21.53■■□□□ 1.04
FOXRED2-201ENST00000216187 MIER1Q8N108 512 aa21.5■■□□□ 1.03
FOXRED2-201ENST00000216187 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
FOXRED2-201ENST00000216187 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
FOXRED2-201ENST00000216187 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
FOXRED2-201ENST00000216187 CECR2Q9BXF3 1484 aa21.28■■□□□ 1
FOXRED2-201ENST00000216187 P3H3Q8IVL6 736 aa21.27■■□□□ 1
FOXRED2-201ENST00000216187 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
FOXRED2-201ENST00000216187 DDX10Q13206 875 aaKnown RBP21.14■□□□□ 0.98
FOXRED2-201ENST00000216187 FKBP8Q14318 412 aa21.12■□□□□ 0.97
FOXRED2-201ENST00000216187 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
FOXRED2-201ENST00000216187 TRIM52Q96A61 297 aa21.09■□□□□ 0.97
FOXRED2-201ENST00000216187 CEP162Q5TB80 1403 aa21.07■□□□□ 0.96
FOXRED2-201ENST00000216187 ARID3CA6NKF2 412 aa21.03■□□□□ 0.96
FOXRED2-201ENST00000216187 ANP32CO43423 234 aa21■□□□□ 0.95
FOXRED2-201ENST00000216187 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
FOXRED2-201ENST00000216187 IRX6P78412 446 aaPredicted RBP20.95■□□□□ 0.94
FOXRED2-201ENST00000216187 SOGA1O94964 1423 aa20.93■□□□□ 0.94
FOXRED2-201ENST00000216187 ZNF326Q5BKZ1 582 aaKnown RBP20.91■□□□□ 0.94
FOXRED2-201ENST00000216187 CLIP1P30622 1438 aa20.88■□□□□ 0.93
FOXRED2-201ENST00000216187 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
FOXRED2-201ENST00000216187 HNRNPUQ00839 825 aaKnown RBP eCLIP20.81■□□□□ 0.92
FOXRED2-201ENST00000216187 WIZO95785 1651 aa20.79■□□□□ 0.92
FOXRED2-201ENST00000216187 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.92
FOXRED2-201ENST00000216187 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
FOXRED2-201ENST00000216187 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
FOXRED2-201ENST00000216187 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
FOXRED2-201ENST00000216187 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
FOXRED2-201ENST00000216187 TNIKQ9UKE5 1360 aa20.74■□□□□ 0.91
FOXRED2-201ENST00000216187 FAM9BQ8IZU0 186 aa20.72■□□□□ 0.91
FOXRED2-201ENST00000216187 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
FOXRED2-201ENST00000216187 NACADO15069 1562 aa20.67■□□□□ 0.9
FOXRED2-201ENST00000216187 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
FOXRED2-201ENST00000216187 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
FOXRED2-201ENST00000216187 KANK4Q5T7N3 995 aaPredicted RBP20.63■□□□□ 0.89
FOXRED2-201ENST00000216187 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
FOXRED2-201ENST00000216187 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
FOXRED2-201ENST00000216187 TONSLQ96HA7 1378 aa20.6■□□□□ 0.89
FOXRED2-201ENST00000216187 RTL5Q5HYW3 569 aaPredicted RBP20.58■□□□□ 0.89
FOXRED2-201ENST00000216187 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
FOXRED2-201ENST00000216187 NPM2Q86SE8 214 aaKnown RBP20.57■□□□□ 0.88
FOXRED2-201ENST00000216187 FBLN2P98095 1184 aa20.56■□□□□ 0.88
FOXRED2-201ENST00000216187 NBR1Q14596 966 aa20.55■□□□□ 0.88
FOXRED2-201ENST00000216187 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
FOXRED2-201ENST00000216187 ANP32EQ9BTT0 268 aa20.5■□□□□ 0.87
FOXRED2-201ENST00000216187 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
FOXRED2-201ENST00000216187 RRP7BPQ9NSQ0 103 aa20.47■□□□□ 0.87
FOXRED2-201ENST00000216187 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
FOXRED2-201ENST00000216187 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
FOXRED2-201ENST00000216187 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
FOXRED2-201ENST00000216187 EEA1Q15075 1411 aa20.44■□□□□ 0.86
FOXRED2-201ENST00000216187 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
FOXRED2-201ENST00000216187 BAZ1AQ9NRL2 1556 aaPredicted RBP20.41■□□□□ 0.86
FOXRED2-201ENST00000216187 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
FOXRED2-201ENST00000216187 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
FOXRED2-201ENST00000216187 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms