RNA–Protein interactions for RNA: ENSMUST00000212800.1

C78859-201, mousemouse

BASIC

Gene C78859, Length 5,943 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C78859-201ENSMUST00000212800 Rhox8Q6VSS7 320 aa15.11■□□□□ 0.01
C78859-201ENSMUST00000212800 Rpgrip1Q9EPQ2 1331 aa14.43□□□□□ -0.1
C78859-201ENSMUST00000212800 Cngb1E1AZ71 1325 aa13.8□□□□□ -0.2
C78859-201ENSMUST00000212800 Las1lA2BE28 776 aaKnown RBP13.78□□□□□ -0.2
C78859-201ENSMUST00000212800 Pelp1Q9DBD5 1123 aaKnown RBP13.46□□□□□ -0.26
C78859-201ENSMUST00000212800 Ehmt2Q9Z148 1263 aaKnown RBP13.39□□□□□ -0.27
C78859-201ENSMUST00000212800 Trim41Q5NCC3 630 aa13.33□□□□□ -0.28
C78859-201ENSMUST00000212800 Ccdc136Q3TVA9 1136 aa13.3□□□□□ -0.28
C78859-201ENSMUST00000212800 Wdr66E9Q743 1299 aa13.3□□□□□ -0.28
C78859-201ENSMUST00000212800 Esf1Q3V1V3 845 aaKnown RBP13.25□□□□□ -0.29
C78859-201ENSMUST00000212800 Zeb1Q64318 1117 aa13.12□□□□□ -0.31
C78859-201ENSMUST00000212800 NefmP08553 848 aa13.11□□□□□ -0.31
C78859-201ENSMUST00000212800 Acin1Q9JIX8 1338 aaKnown RBP13.11□□□□□ -0.31
C78859-201ENSMUST00000212800 NischQ80TM9 1593 aa13.07□□□□□ -0.32
C78859-201ENSMUST00000212800 Ube2uB1AUC4 352 aa13.06□□□□□ -0.32
C78859-201ENSMUST00000212800 Gab3Q8BSM5 595 aa13.05□□□□□ -0.32
C78859-201ENSMUST00000212800 CenpbP27790 599 aa13.05□□□□□ -0.32
C78859-201ENSMUST00000212800 Npm2Q80W85 207 aa13.01□□□□□ -0.33
C78859-201ENSMUST00000212800 Stra8P70278 393 aa13□□□□□ -0.33
C78859-201ENSMUST00000212800 HrcG5E8J6 738 aa12.93□□□□□ -0.34
C78859-201ENSMUST00000212800 Myt1lP97500 1187 aa12.85□□□□□ -0.35
C78859-201ENSMUST00000212800 Myt1Q8CFC2 1127 aa12.85□□□□□ -0.35
C78859-201ENSMUST00000212800 Ccdc180J3QNE4 1664 aa12.77□□□□□ -0.37
C78859-201ENSMUST00000212800 UbtfP25976 765 aaKnown RBP12.69□□□□□ -0.38
C78859-201ENSMUST00000212800 Cdk11bP24788 784 aaKnown RBP12.68□□□□□ -0.38
C78859-201ENSMUST00000212800 Tnnt3Q9QZ47 272 aa12.66□□□□□ -0.38
C78859-201ENSMUST00000212800 Amer1Q7TS75 1132 aa12.63□□□□□ -0.39
C78859-201ENSMUST00000212800 Pcgf6Q99NA9 353 aa12.6□□□□□ -0.39
C78859-201ENSMUST00000212800 Rtl1Q7M732 1744 aa12.57□□□□□ -0.4
C78859-201ENSMUST00000212800 Anp32bQ9EST5 272 aaKnown RBP12.53□□□□□ -0.4
C78859-201ENSMUST00000212800 Nop58Q6DFW4 536 aaKnown RBP12.5□□□□□ -0.41
C78859-201ENSMUST00000212800 NrdcQ8BHG1 1161 aa12.46□□□□□ -0.41
C78859-201ENSMUST00000212800 Slc24a1Q91WD8 1130 aa12.44□□□□□ -0.42
C78859-201ENSMUST00000212800 Rtl5Q5DTT4 599 aa12.44□□□□□ -0.42
C78859-201ENSMUST00000212800 4930567H17RikQ3V0K5 233 aa12.41□□□□□ -0.42
C78859-201ENSMUST00000212800 NeflP08551 543 aa12.37□□□□□ -0.43
C78859-201ENSMUST00000212800 NclP09405 707 aaKnown RBP12.35□□□□□ -0.43
C78859-201ENSMUST00000212800 TonslQ6NZL6 1363 aa12.31□□□□□ -0.44
C78859-201ENSMUST00000212800 Fam50aQ9WV03 339 aaKnown RBP12.29□□□□□ -0.44
C78859-201ENSMUST00000212800 4933416C03RikQ3V063 378 aa12.29□□□□□ -0.44
C78859-201ENSMUST00000212800 Il27Q8K3I6 234 aa12.29□□□□□ -0.44
C78859-201ENSMUST00000212800 Supt5hO55201 1082 aaKnown RBP12.25□□□□□ -0.45
C78859-201ENSMUST00000212800 Zcchc6Q5BLK4 1491 aaKnown RBP12.25□□□□□ -0.45
C78859-201ENSMUST00000212800 Neurod1Q60867 357 aa12.21□□□□□ -0.45
C78859-201ENSMUST00000212800 ClspnQ80YR7 1315 aa12.17□□□□□ -0.46
C78859-201ENSMUST00000212800 Abcc9P70170 1546 aa12.17□□□□□ -0.46
C78859-201ENSMUST00000212800 Mier1Q5UAK0 511 aa12.16□□□□□ -0.46
C78859-201ENSMUST00000212800 Ttbk1Q6PCN3 1308 aa12.13□□□□□ -0.47
C78859-201ENSMUST00000212800 Eif5bQ05D44 1216 aaKnown RBP12.12□□□□□ -0.47
C78859-201ENSMUST00000212800 Anp32aO35381 247 aa12.11□□□□□ -0.47
C78859-201ENSMUST00000212800 Ap3b1Q9Z1T1 1105 aa12.09□□□□□ -0.47
C78859-201ENSMUST00000212800 Os9Q8K2C7 672 aa12.07□□□□□ -0.48
C78859-201ENSMUST00000212800 Ccer2J3QPU5 274 aa12.01□□□□□ -0.49
C78859-201ENSMUST00000212800 Anks4bQ8K3X6 423 aa11.99□□□□□ -0.49
C78859-201ENSMUST00000212800 Ppargc1bQ8VHJ7 1014 aa11.98□□□□□ -0.49
C78859-201ENSMUST00000212800 Hdac5Q9Z2V6 1113 aa11.98□□□□□ -0.49
C78859-201ENSMUST00000212800 Dcaf1Q80TR8 1506 aa11.98□□□□□ -0.49
C78859-201ENSMUST00000212800 Aplp2Q06335 707 aa11.94□□□□□ -0.5
C78859-201ENSMUST00000212800 Npm1Q61937 292 aaKnown RBP11.94□□□□□ -0.5
C78859-201ENSMUST00000212800 DiexfQ8BTT6 772 aaKnown RBP11.93□□□□□ -0.5
C78859-201ENSMUST00000212800 Cep164Q5DU05 1446 aa11.91□□□□□ -0.5
C78859-201ENSMUST00000212800 Plekhg3Q4VAC9 1341 aa11.88□□□□□ -0.51
C78859-201ENSMUST00000212800 Brd4Q9ESU6 1400 aaKnown RBP11.88□□□□□ -0.51
C78859-201ENSMUST00000212800 DaxxO35613 739 aa11.87□□□□□ -0.51
C78859-201ENSMUST00000212800 Upf2A2AT37 1269 aaKnown RBP11.86□□□□□ -0.51
C78859-201ENSMUST00000212800 Abcc8B2RUS7 1588 aa11.85□□□□□ -0.51
C78859-201ENSMUST00000212800 Lmod2Q3UHZ5 550 aa11.84□□□□□ -0.51
C78859-201ENSMUST00000212800 Sall2Q9QX96 1004 aa11.84□□□□□ -0.51
C78859-201ENSMUST00000212800 Clip1Q922J3 1391 aa11.82□□□□□ -0.52
C78859-201ENSMUST00000212800 Ccdc9Q8VC31 543 aaKnown RBP11.82□□□□□ -0.52
C78859-201ENSMUST00000212800 Hnrnpul2Q00PI9 745 aaKnown RBP11.75□□□□□ -0.53
C78859-201ENSMUST00000212800 Nlrp6Q91WS2 869 aa11.75□□□□□ -0.53
C78859-201ENSMUST00000212800 Calr4Q3TQS0 420 aa11.73□□□□□ -0.53
C78859-201ENSMUST00000212800 Eid3Q3V124 375 aa11.71□□□□□ -0.53
C78859-201ENSMUST00000212800 Gm35339A0A140LHH9 1649 aa11.71□□□□□ -0.54
C78859-201ENSMUST00000212800 Csrnp3P59055 597 aa11.68□□□□□ -0.54
C78859-201ENSMUST00000212800 Wdr43Q6ZQL4 677 aaKnown RBP11.67□□□□□ -0.54
C78859-201ENSMUST00000212800 Clstn2Q9ER65 966 aa11.66□□□□□ -0.54
C78859-201ENSMUST00000212800 Chic1Q8CBW7 227 aa11.65□□□□□ -0.54
C78859-201ENSMUST00000212800 Zbtb7cQ8VCZ7 619 aa11.64□□□□□ -0.55
C78859-201ENSMUST00000212800 Ppp4r2Q0VGB7 417 aa11.62□□□□□ -0.55
C78859-201ENSMUST00000212800 Gm13697A2AK42 830 aa11.61□□□□□ -0.55
C78859-201ENSMUST00000212800 Mrs2Q5NCE8 434 aa11.61□□□□□ -0.55
C78859-201ENSMUST00000212800 Mapk8ip2Q9ERE9 830 aa11.58□□□□□ -0.56
C78859-201ENSMUST00000212800 Erich6D3Z6S9 713 aa11.57□□□□□ -0.56
C78859-201ENSMUST00000212800 Polr3glQ8R0C0 218 aa11.56□□□□□ -0.56
C78859-201ENSMUST00000212800 Hsp90aa1P07901 733 aaKnown RBP11.54□□□□□ -0.56
C78859-201ENSMUST00000212800 BlmO88700 1416 aa11.53□□□□□ -0.56
C78859-201ENSMUST00000212800 Atp1b4Q99ME6 356 aa11.53□□□□□ -0.56
C78859-201ENSMUST00000212800 Zbtb4Q5F293 982 aa11.52□□□□□ -0.56
C78859-201ENSMUST00000212800 Gm38655A0A286YDK6 273 aa11.5□□□□□ -0.57
C78859-201ENSMUST00000212800 Setd5Q5XJV7 1441 aa11.48□□□□□ -0.57
C78859-201ENSMUST00000212800 Rb1cc1Q9ESK9 1588 aa11.47□□□□□ -0.57
C78859-201ENSMUST00000212800 Gm13695A2AK44 830 aa11.45□□□□□ -0.58
C78859-201ENSMUST00000212800 Cwc22Q8C5N3 908 aaKnown RBP11.44□□□□□ -0.58
C78859-201ENSMUST00000212800 1700123L14RikQ3V2K7 440 aa11.44□□□□□ -0.58
C78859-201ENSMUST00000212800 Htatsf1Q8BGC0 757 aa11.43□□□□□ -0.58
C78859-201ENSMUST00000212800 Chic2Q9D9G3 165 aa11.42□□□□□ -0.58
C78859-201ENSMUST00000212800 Trim44Q9QXA7 346 aa11.42□□□□□ -0.58
C78859-201ENSMUST00000212800 ArxO35085 564 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 145.3 ms