RNA–Protein interactions for RNA: ENSMUST00000200546.1

Syde2-203, Transcript of Synapse defective 1, Rho GTPase, homolog 2 (C. elegans), mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syde2, Length 4,712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syde2-203ENSMUST00000200546 Rhox8Q6VSS7 320 aa21.26■□□□□ 0.99
Syde2-203ENSMUST00000200546 NischQ80TM9 1593 aa21.2■□□□□ 0.98
Syde2-203ENSMUST00000200546 Rpgrip1Q9EPQ2 1331 aa21.05■□□□□ 0.96
Syde2-203ENSMUST00000200546 Las1lA2BE28 776 aaKnown RBP20.56■□□□□ 0.88
Syde2-203ENSMUST00000200546 Cngb1E1AZ71 1325 aa20.28■□□□□ 0.84
Syde2-203ENSMUST00000200546 Ehmt2Q9Z148 1263 aaKnown RBP20.26■□□□□ 0.83
Syde2-203ENSMUST00000200546 Abcc9P70170 1546 aa20.24■□□□□ 0.83
Syde2-203ENSMUST00000200546 Gm35339A0A140LHH9 1649 aa19.92■□□□□ 0.78
Syde2-203ENSMUST00000200546 Abcc8B2RUS7 1588 aa19.88■□□□□ 0.77
Syde2-203ENSMUST00000200546 Pelp1Q9DBD5 1123 aaKnown RBP19.71■□□□□ 0.75
Syde2-203ENSMUST00000200546 Wdr66E9Q743 1299 aa19.64■□□□□ 0.73
Syde2-203ENSMUST00000200546 Zeb1Q64318 1117 aa19.61■□□□□ 0.73
Syde2-203ENSMUST00000200546 CenpbP27790 599 aa19.59■□□□□ 0.73
Syde2-203ENSMUST00000200546 Amer1Q7TS75 1132 aa19.43■□□□□ 0.7
Syde2-203ENSMUST00000200546 Ccdc136Q3TVA9 1136 aa19.41■□□□□ 0.7
Syde2-203ENSMUST00000200546 Acin1Q9JIX8 1338 aaKnown RBP19.35■□□□□ 0.69
Syde2-203ENSMUST00000200546 Myt1Q8CFC2 1127 aa19.29■□□□□ 0.68
Syde2-203ENSMUST00000200546 Pcgf6Q99NA9 353 aa19.16■□□□□ 0.66
Syde2-203ENSMUST00000200546 Rtl1Q7M732 1744 aa18.96■□□□□ 0.63
Syde2-203ENSMUST00000200546 DiexfQ8BTT6 772 aaKnown RBP18.92■□□□□ 0.62
Syde2-203ENSMUST00000200546 Ccdc180J3QNE4 1664 aa18.88■□□□□ 0.61
Syde2-203ENSMUST00000200546 Ttbk1Q6PCN3 1308 aa18.87■□□□□ 0.61
Syde2-203ENSMUST00000200546 Trim41Q5NCC3 630 aa18.84■□□□□ 0.61
Syde2-203ENSMUST00000200546 NefmP08553 848 aa18.76■□□□□ 0.59
Syde2-203ENSMUST00000200546 Cdk11bP24788 784 aaKnown RBP18.74■□□□□ 0.59
Syde2-203ENSMUST00000200546 Gab3Q8BSM5 595 aa18.72■□□□□ 0.59
Syde2-203ENSMUST00000200546 Zcchc6Q5BLK4 1491 aaKnown RBP18.72■□□□□ 0.59
Syde2-203ENSMUST00000200546 Esf1Q3V1V3 845 aaKnown RBP18.68■□□□□ 0.58
Syde2-203ENSMUST00000200546 Supt5hO55201 1082 aaKnown RBP18.61■□□□□ 0.57
Syde2-203ENSMUST00000200546 Rb1cc1Q9ESK9 1588 aa18.59■□□□□ 0.57
Syde2-203ENSMUST00000200546 Stra8P70278 393 aa18.55■□□□□ 0.56
Syde2-203ENSMUST00000200546 Ube2uB1AUC4 352 aa18.54■□□□□ 0.56
Syde2-203ENSMUST00000200546 4933416C03RikQ3V063 378 aa18.52■□□□□ 0.56
Syde2-203ENSMUST00000200546 Nop58Q6DFW4 536 aaKnown RBP18.5■□□□□ 0.55
Syde2-203ENSMUST00000200546 4930567H17RikQ3V0K5 233 aa18.46■□□□□ 0.55
Syde2-203ENSMUST00000200546 Slc24a1Q91WD8 1130 aa18.46■□□□□ 0.55
Syde2-203ENSMUST00000200546 HrcG5E8J6 738 aa18.45■□□□□ 0.54
Syde2-203ENSMUST00000200546 NacadQ5SWP3 1504 aa18.38■□□□□ 0.53
Syde2-203ENSMUST00000200546 Tnnt3Q9QZ47 272 aa18.38■□□□□ 0.53
Syde2-203ENSMUST00000200546 Kdm5dQ62240 1548 aa18.35■□□□□ 0.53
Syde2-203ENSMUST00000200546 Dcaf1Q80TR8 1506 aa18.32■□□□□ 0.52
Syde2-203ENSMUST00000200546 UbtfP25976 765 aaKnown RBP18.32■□□□□ 0.52
Syde2-203ENSMUST00000200546 ScribQ80U72 1612 aa18.31■□□□□ 0.52
Syde2-203ENSMUST00000200546 Neurod1Q60867 357 aa18.27■□□□□ 0.52
Syde2-203ENSMUST00000200546 Rtl5Q5DTT4 599 aa18.26■□□□□ 0.51
Syde2-203ENSMUST00000200546 Ppargc1bQ8VHJ7 1014 aa18.25■□□□□ 0.51
Syde2-203ENSMUST00000200546 Baz1aO88379 1555 aa18.25■□□□□ 0.51
Syde2-203ENSMUST00000200546 Myt1lP97500 1187 aa18.22■□□□□ 0.51
Syde2-203ENSMUST00000200546 Npm2Q80W85 207 aa18.12■□□□□ 0.49
Syde2-203ENSMUST00000200546 Csrnp3P59055 597 aa18.06■□□□□ 0.48
Syde2-203ENSMUST00000200546 Gm38655A0A286YDK6 273 aa18.06■□□□□ 0.48
Syde2-203ENSMUST00000200546 Eif5bQ05D44 1216 aaKnown RBP17.99■□□□□ 0.47
Syde2-203ENSMUST00000200546 Anp32aO35381 247 aa17.94■□□□□ 0.46
Syde2-203ENSMUST00000200546 Anks4bQ8K3X6 423 aa17.94■□□□□ 0.46
Syde2-203ENSMUST00000200546 Brd4Q9ESU6 1400 aaKnown RBP17.93■□□□□ 0.46
Syde2-203ENSMUST00000200546 Aplp2Q06335 707 aa17.93■□□□□ 0.46
Syde2-203ENSMUST00000200546 NrdcQ8BHG1 1161 aa17.88■□□□□ 0.45
Syde2-203ENSMUST00000200546 DaxxO35613 739 aa17.87■□□□□ 0.45
Syde2-203ENSMUST00000200546 Chic1Q8CBW7 227 aa17.84■□□□□ 0.45
Syde2-203ENSMUST00000200546 Sycp2Q9CUU3 1500 aa17.82■□□□□ 0.44
Syde2-203ENSMUST00000200546 NeflP08551 543 aa17.81■□□□□ 0.44
Syde2-203ENSMUST00000200546 Il27Q8K3I6 234 aa17.81■□□□□ 0.44
Syde2-203ENSMUST00000200546 1700123L14RikQ3V2K7 440 aa17.76■□□□□ 0.43
Syde2-203ENSMUST00000200546 NclP09405 707 aaKnown RBP17.75■□□□□ 0.43
Syde2-203ENSMUST00000200546 TonslQ6NZL6 1363 aa17.74■□□□□ 0.43
Syde2-203ENSMUST00000200546 Cep164Q5DU05 1446 aa17.73■□□□□ 0.43
Syde2-203ENSMUST00000200546 Sall2Q9QX96 1004 aa17.73■□□□□ 0.43
Syde2-203ENSMUST00000200546 Mier1Q5UAK0 511 aa17.71■□□□□ 0.43
Syde2-203ENSMUST00000200546 ClspnQ80YR7 1315 aa17.71■□□□□ 0.43
Syde2-203ENSMUST00000200546 Crybg2B7ZCC2 1516 aa17.68■□□□□ 0.42
Syde2-203ENSMUST00000200546 Bcl11aQ9QYE3 773 aa17.66■□□□□ 0.42
Syde2-203ENSMUST00000200546 Smarca2Q6DIC0 1577 aa17.62■□□□□ 0.41
Syde2-203ENSMUST00000200546 Cecr2E9Q2Z1 1453 aa17.55■□□□□ 0.4
Syde2-203ENSMUST00000200546 Anp32bQ9EST5 272 aaKnown RBP17.55■□□□□ 0.4
Syde2-203ENSMUST00000200546 Golga3P55937 1487 aa17.55■□□□□ 0.4
Syde2-203ENSMUST00000200546 Rsf1E9PWW9 1441 aaKnown RBP17.49■□□□□ 0.39
Syde2-203ENSMUST00000200546 Mapk8ip2Q9ERE9 830 aa17.48■□□□□ 0.39
Syde2-203ENSMUST00000200546 Fam50aQ9WV03 339 aaKnown RBP17.47■□□□□ 0.39
Syde2-203ENSMUST00000200546 Fam71e1A1L3C1 212 aa17.43■□□□□ 0.38
Syde2-203ENSMUST00000200546 Ap3b1Q9Z1T1 1105 aa17.4■□□□□ 0.38
Syde2-203ENSMUST00000200546 Ccdc9Q8VC31 543 aaKnown RBP17.37■□□□□ 0.37
Syde2-203ENSMUST00000200546 Ccdc88bQ4QRL3 1481 aa17.37■□□□□ 0.37
Syde2-203ENSMUST00000200546 Ppp4r2Q0VGB7 417 aa17.35■□□□□ 0.37
Syde2-203ENSMUST00000200546 Calr4Q3TQS0 420 aa17.34■□□□□ 0.37
Syde2-203ENSMUST00000200546 CftrP26361 1476 aa17.33■□□□□ 0.36
Syde2-203ENSMUST00000200546 Ythdc1E9Q5K9 736 aaKnown RBP17.33■□□□□ 0.36
Syde2-203ENSMUST00000200546 Synj1Q8CHC4 1574 aa17.31■□□□□ 0.36
Syde2-203ENSMUST00000200546 Hsp90aa1P07901 733 aaKnown RBP17.29■□□□□ 0.36
Syde2-203ENSMUST00000200546 Npm1Q61937 292 aaKnown RBP17.28■□□□□ 0.36
Syde2-203ENSMUST00000200546 Plekhg3Q4VAC9 1341 aa17.25■□□□□ 0.35
Syde2-203ENSMUST00000200546 ArxO35085 564 aa17.21■□□□□ 0.34
Syde2-203ENSMUST00000200546 Wdr43Q6ZQL4 677 aaKnown RBP17.21■□□□□ 0.34
Syde2-203ENSMUST00000200546 Ubl4bQ9CQ84 188 aa17.17■□□□□ 0.34
Syde2-203ENSMUST00000200546 BicraF8VPZ9 1578 aa17.15■□□□□ 0.34
Syde2-203ENSMUST00000200546 Pds5bQ4VA53 1446 aaKnown RBP17.15■□□□□ 0.34
Syde2-203ENSMUST00000200546 Smarca4Q3TKT4 1613 aaKnown RBP17.13■□□□□ 0.33
Syde2-203ENSMUST00000200546 Lmod3E9QA62 571 aa17.13■□□□□ 0.33
Syde2-203ENSMUST00000200546 Kif15Q6P9L6 1387 aa17.12■□□□□ 0.33
Syde2-203ENSMUST00000200546 Clip1Q922J3 1391 aa17.11■□□□□ 0.33
Syde2-203ENSMUST00000200546 Eid3Q3V124 375 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms