RNA–Protein interactions for RNA: ENSMUST00000198028.1

Gm42880-201, mousemouse

TSL 3 BASIC

Gene Gm42880, Length 459 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42880-201ENSMUST00000198028 Chic1Q8CBW7 227 aa17.48■□□□□ 0.39
Gm42880-201ENSMUST00000198028 Mapk8ip2Q9ERE9 830 aa16.93■□□□□ 0.3
Gm42880-201ENSMUST00000198028 Phf23Q8BSN5 401 aa15.81■□□□□ 0.12
Gm42880-201ENSMUST00000198028 Plppr3Q7TPB0 716 aa15.28■□□□□ 0.04
Gm42880-201ENSMUST00000198028 Gab3Q8BSM5 595 aa15.09■□□□□ 0.01
Gm42880-201ENSMUST00000198028 Gm35339A0A140LHH9 1649 aa14.71□□□□□ -0.05
Gm42880-201ENSMUST00000198028 Senp3Q9EP97 568 aaKnown RBP14.53□□□□□ -0.08
Gm42880-201ENSMUST00000198028 NischQ80TM9 1593 aa14.33□□□□□ -0.12
Gm42880-201ENSMUST00000198028 Kcna4Q61423 654 aa14.1□□□□□ -0.15
Gm42880-201ENSMUST00000198028 Abcc8B2RUS7 1588 aa13.95□□□□□ -0.18
Gm42880-201ENSMUST00000198028 Abcc9P70170 1546 aa13.89□□□□□ -0.19
Gm42880-201ENSMUST00000198028 ScribQ80U72 1612 aa13.61□□□□□ -0.23
Gm42880-201ENSMUST00000198028 NacadQ5SWP3 1504 aa13.18□□□□□ -0.3
Gm42880-201ENSMUST00000198028 Kdm5dQ62240 1548 aa13.09□□□□□ -0.31
Gm42880-201ENSMUST00000198028 Sycp2Q9CUU3 1500 aa12.93□□□□□ -0.34
Gm42880-201ENSMUST00000198028 Dcaf1Q80TR8 1506 aa12.83□□□□□ -0.35
Gm42880-201ENSMUST00000198028 BicraF8VPZ9 1578 aa12.77□□□□□ -0.37
Gm42880-201ENSMUST00000198028 Hoxd11P23813 323 aa12.75□□□□□ -0.37
Gm42880-201ENSMUST00000198028 Dnajc5bQ9CQ94 199 aa12.75□□□□□ -0.37
Gm42880-201ENSMUST00000198028 Trap1aP19473 224 aa12.73□□□□□ -0.37
Gm42880-201ENSMUST00000198028 Dmrt2Q8BG36 561 aa12.61□□□□□ -0.39
Gm42880-201ENSMUST00000198028 Thoc2B1AZI6 1594 aaKnown RBP12.53□□□□□ -0.4
Gm42880-201ENSMUST00000198028 Pds5bQ4VA53 1446 aaKnown RBP12.53□□□□□ -0.4
Gm42880-201ENSMUST00000198028 Ppargc1bQ8VHJ7 1014 aa12.49□□□□□ -0.41
Gm42880-201ENSMUST00000198028 Fam163aQ8CAA5 168 aa12.47□□□□□ -0.41
Gm42880-201ENSMUST00000198028 Rb1cc1Q9ESK9 1588 aa12.46□□□□□ -0.42
Gm42880-201ENSMUST00000198028 Crybg2B7ZCC2 1516 aa12.35□□□□□ -0.43
Gm42880-201ENSMUST00000198028 Atad2bE9Q166 1460 aaKnown RBP12.34□□□□□ -0.43
Gm42880-201ENSMUST00000198028 Ccdc180J3QNE4 1664 aa12.32□□□□□ -0.44
Gm42880-201ENSMUST00000198028 Baz1aO88379 1555 aa12.28□□□□□ -0.44
Gm42880-201ENSMUST00000198028 Cc2d2aQ8CFW7 1633 aa12.26□□□□□ -0.45
Gm42880-201ENSMUST00000198028 Ercc6F8VPZ5 1481 aa12.24□□□□□ -0.45
Gm42880-201ENSMUST00000198028 Fam135aQ6NS59 1506 aa12.2□□□□□ -0.46
Gm42880-201ENSMUST00000198028 Baz1bQ9Z277 1479 aa12.2□□□□□ -0.46
Gm42880-201ENSMUST00000198028 Znf219Q6IQX8 726 aa12.17□□□□□ -0.46
Gm42880-201ENSMUST00000198028 Smarca2Q6DIC0 1577 aa12.14□□□□□ -0.47
Gm42880-201ENSMUST00000198028 Smarca4Q3TKT4 1613 aaKnown RBP12.11□□□□□ -0.47
Gm42880-201ENSMUST00000198028 Zcchc6Q5BLK4 1491 aaKnown RBP12.09□□□□□ -0.47
Gm42880-201ENSMUST00000198028 Iqgap2Q3UQ44 1575 aa12.08□□□□□ -0.48
Gm42880-201ENSMUST00000198028 Slc4a1apE9PX68 744 aa12.07□□□□□ -0.48
Gm42880-201ENSMUST00000198028 Chrna2Q91X60 512 aa12.05□□□□□ -0.48
Gm42880-201ENSMUST00000198028 Wdr62Q3U3T8 1523 aa12.04□□□□□ -0.48
Gm42880-201ENSMUST00000198028 Phldb1Q6PDH0 1371 aaKnown RBP12.03□□□□□ -0.48
Gm42880-201ENSMUST00000198028 Frmpd1A2AKB4 1549 aa11.98□□□□□ -0.49
Gm42880-201ENSMUST00000198028 Atf5O70191 283 aa11.97□□□□□ -0.49
Gm42880-201ENSMUST00000198028 Rhox8Q6VSS7 320 aa11.96□□□□□ -0.49
Gm42880-201ENSMUST00000198028 Dnajc5P60904 198 aa11.94□□□□□ -0.5
Gm42880-201ENSMUST00000198028 Rsph4aQ8BYM7 716 aa11.93□□□□□ -0.5
Gm42880-201ENSMUST00000198028 Cecr2E9Q2Z1 1453 aa11.9□□□□□ -0.5
Gm42880-201ENSMUST00000198028 Mrc2Q64449 1479 aa11.89□□□□□ -0.51
Gm42880-201ENSMUST00000198028 Ubl4bQ9CQ84 188 aa11.85□□□□□ -0.51
Gm42880-201ENSMUST00000198028 Rimbp2Q80U40 1072 aa11.82□□□□□ -0.52
Gm42880-201ENSMUST00000198028 Unc13aQ4KUS2 1712 aa11.79□□□□□ -0.52
Gm42880-201ENSMUST00000198028 Ppp4r2Q0VGB7 417 aa11.74□□□□□ -0.53
Gm42880-201ENSMUST00000198028 Hs6st3Q9QYK4 470 aa11.74□□□□□ -0.53
Gm42880-201ENSMUST00000198028 Trim41Q5NCC3 630 aa11.67□□□□□ -0.54
Gm42880-201ENSMUST00000198028 Cttnbp2B9EJA2 1648 aa11.66□□□□□ -0.54
Gm42880-201ENSMUST00000198028 CftrP26361 1476 aa11.64□□□□□ -0.55
Gm42880-201ENSMUST00000198028 Rsf1E9PWW9 1441 aaKnown RBP11.62□□□□□ -0.55
Gm42880-201ENSMUST00000198028 Lrriq1Q0P5X1 1673 aa11.62□□□□□ -0.55
Gm42880-201ENSMUST00000198028 Shroom2A2ALU4 1481 aa11.57□□□□□ -0.56
Gm42880-201ENSMUST00000198028 Brd4Q9ESU6 1400 aaKnown RBP11.55□□□□□ -0.56
Gm42880-201ENSMUST00000198028 Synj1Q8CHC4 1574 aa11.54□□□□□ -0.56
Gm42880-201ENSMUST00000198028 1700123L14RikQ3V2K7 440 aa11.51□□□□□ -0.57
Gm42880-201ENSMUST00000198028 Akt1s1Q9D1F4 257 aa11.51□□□□□ -0.57
Gm42880-201ENSMUST00000198028 Cux2P70298 1426 aa11.51□□□□□ -0.57
Gm42880-201ENSMUST00000198028 ArsiQ32KI9 573 aa11.49□□□□□ -0.57
Gm42880-201ENSMUST00000198028 Eif4g3Q80XI3 1579 aaKnown RBP11.49□□□□□ -0.57
Gm42880-201ENSMUST00000198028 Kif21aQ9QXL2 1672 aa11.48□□□□□ -0.57
Gm42880-201ENSMUST00000198028 Kif15Q6P9L6 1387 aa11.44□□□□□ -0.58
Gm42880-201ENSMUST00000198028 Rtl1Q7M732 1744 aa11.43□□□□□ -0.58
Gm42880-201ENSMUST00000198028 Col17a1Q07563 1470 aa11.4□□□□□ -0.58
Gm42880-201ENSMUST00000198028 Lamc3Q9R0B6 1581 aa11.39□□□□□ -0.59
Gm42880-201ENSMUST00000198028 Npm1Q61937 292 aaKnown RBP11.35□□□□□ -0.59
Gm42880-201ENSMUST00000198028 Slc34a2Q9DBP0 697 aa11.35□□□□□ -0.59
Gm42880-201ENSMUST00000198028 Top2bQ64511 1612 aa11.34□□□□□ -0.59
Gm42880-201ENSMUST00000198028 Cep164Q5DU05 1446 aa11.34□□□□□ -0.59
Gm42880-201ENSMUST00000198028 Esf1Q3V1V3 845 aaKnown RBP11.32□□□□□ -0.6
Gm42880-201ENSMUST00000198028 Bach1P97302 739 aa11.31□□□□□ -0.6
Gm42880-201ENSMUST00000198028 Pabpn1Q8CCS6 302 aaKnown RBP11.3□□□□□ -0.6
Gm42880-201ENSMUST00000198028 Urb2E9Q7L1 1524 aaKnown RBP11.3□□□□□ -0.6
Gm42880-201ENSMUST00000198028 Zcchc11B2RX14 1644 aaKnown RBP11.28□□□□□ -0.6
Gm42880-201ENSMUST00000198028 Dhx29Q6PGC1 1365 aaKnown RBP11.26□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Plb1Q3TTY0 1478 aa11.25□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Fam71e1A1L3C1 212 aa11.23□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Ccdc18Q640L5 1455 aa11.23□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Ccdc136Q3TVA9 1136 aa11.22□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Rusc2Q80U22 1514 aa11.22□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Crocc2F6XLV1 1638 aa11.21□□□□□ -0.61
Gm42880-201ENSMUST00000198028 Ift140E9PY46 1464 aa11.2□□□□□ -0.62
Gm42880-201ENSMUST00000198028 LrpprcQ6PB66 1392 aaKnown RBP11.2□□□□□ -0.62
Gm42880-201ENSMUST00000198028 Ube2uB1AUC4 352 aa11.19□□□□□ -0.62
Gm42880-201ENSMUST00000198028 TnnQ80Z71 1560 aa11.17□□□□□ -0.62
Gm42880-201ENSMUST00000198028 Camsap1A2AHC3 1581 aa11.14□□□□□ -0.63
Gm42880-201ENSMUST00000198028 Pelp1Q9DBD5 1123 aaKnown RBP11.13□□□□□ -0.63
Gm42880-201ENSMUST00000198028 PogzQ8BZH4 1409 aaKnown RBP11.11□□□□□ -0.63
Gm42880-201ENSMUST00000198028 Sox12Q04890 314 aa11.11□□□□□ -0.63
Gm42880-201ENSMUST00000198028 Arhgef5E9Q7D5 1581 aa11.08□□□□□ -0.64
Gm42880-201ENSMUST00000198028 Il27Q8K3I6 234 aa11.07□□□□□ -0.64
Gm42880-201ENSMUST00000198028 Cdca7Q9D0M2 382 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms