RNA–Protein interactions for RNA: ENSMUST00000195376.5

Pcdh9-207, Transcript of Protocadherin 9, mousemouse

TSL 5 BASIC

Gene Pcdh9, Length 5,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-207ENSMUST00000195376 Rhox8Q6VSS7 320 aa9.64□□□□□ -0.87
Pcdh9-207ENSMUST00000195376 Gm35339A0A140LHH9 1649 aa9.3□□□□□ -0.92
Pcdh9-207ENSMUST00000195376 NischQ80TM9 1593 aa9.12□□□□□ -0.95
Pcdh9-207ENSMUST00000195376 Cngb1E1AZ71 1325 aa8.98□□□□□ -0.97
Pcdh9-207ENSMUST00000195376 Pelp1Q9DBD5 1123 aaKnown RBP8.91□□□□□ -0.98
Pcdh9-207ENSMUST00000195376 Esf1Q3V1V3 845 aaKnown RBP8.84□□□□□ -0.99
Pcdh9-207ENSMUST00000195376 Rpgrip1Q9EPQ2 1331 aa8.84□□□□□ -0.99
Pcdh9-207ENSMUST00000195376 Las1lA2BE28 776 aaKnown RBP8.82□□□□□ -1
Pcdh9-207ENSMUST00000195376 Abcc9P70170 1546 aa8.82□□□□□ -1
Pcdh9-207ENSMUST00000195376 Trim41Q5NCC3 630 aa8.66□□□□□ -1.02
Pcdh9-207ENSMUST00000195376 4930567H17RikQ3V0K5 233 aa8.6□□□□□ -1.03
Pcdh9-207ENSMUST00000195376 Ccdc136Q3TVA9 1136 aa8.58□□□□□ -1.04
Pcdh9-207ENSMUST00000195376 Zeb1Q64318 1117 aa8.58□□□□□ -1.04
Pcdh9-207ENSMUST00000195376 Wdr66E9Q743 1299 aa8.57□□□□□ -1.04
Pcdh9-207ENSMUST00000195376 Amer1Q7TS75 1132 aa8.5□□□□□ -1.05
Pcdh9-207ENSMUST00000195376 Npm2Q80W85 207 aa8.45□□□□□ -1.06
Pcdh9-207ENSMUST00000195376 Abcc8B2RUS7 1588 aa8.45□□□□□ -1.06
Pcdh9-207ENSMUST00000195376 Zcchc6Q5BLK4 1491 aaKnown RBP8.37□□□□□ -1.07
Pcdh9-207ENSMUST00000195376 Il27Q8K3I6 234 aa8.32□□□□□ -1.08
Pcdh9-207ENSMUST00000195376 Npm1Q61937 292 aaKnown RBP8.29□□□□□ -1.08
Pcdh9-207ENSMUST00000195376 Ccdc180J3QNE4 1664 aa8.25□□□□□ -1.09
Pcdh9-207ENSMUST00000195376 Myt1Q8CFC2 1127 aa8.24□□□□□ -1.09
Pcdh9-207ENSMUST00000195376 CenpbP27790 599 aa8.23□□□□□ -1.09
Pcdh9-207ENSMUST00000195376 NacadQ5SWP3 1504 aa8.23□□□□□ -1.09
Pcdh9-207ENSMUST00000195376 Ube2uB1AUC4 352 aa8.21□□□□□ -1.09
Pcdh9-207ENSMUST00000195376 Myt1lP97500 1187 aa8.19□□□□□ -1.1
Pcdh9-207ENSMUST00000195376 Ubl4bQ9CQ84 188 aa8.19□□□□□ -1.1
Pcdh9-207ENSMUST00000195376 Gab3Q8BSM5 595 aa8.18□□□□□ -1.1
Pcdh9-207ENSMUST00000195376 Ttbk1Q6PCN3 1308 aa8.12□□□□□ -1.11
Pcdh9-207ENSMUST00000195376 Ercc6F8VPZ5 1481 aa8.12□□□□□ -1.11
Pcdh9-207ENSMUST00000195376 Rb1cc1Q9ESK9 1588 aa8.05□□□□□ -1.12
Pcdh9-207ENSMUST00000195376 Pds5bQ4VA53 1446 aaKnown RBP8.04□□□□□ -1.12
Pcdh9-207ENSMUST00000195376 Brd4Q9ESU6 1400 aaKnown RBP8.03□□□□□ -1.12
Pcdh9-207ENSMUST00000195376 Stra8P70278 393 aa8.02□□□□□ -1.13
Pcdh9-207ENSMUST00000195376 Rtl1Q7M732 1744 aa7.98□□□□□ -1.13
Pcdh9-207ENSMUST00000195376 4933416C03RikQ3V063 378 aa7.94□□□□□ -1.14
Pcdh9-207ENSMUST00000195376 Ifnlr1Q8CGK5 535 aa7.91□□□□□ -1.14
Pcdh9-207ENSMUST00000195376 Gm13697A2AK42 830 aa7.9□□□□□ -1.14
Pcdh9-207ENSMUST00000195376 Kdm5dQ62240 1548 aa7.9□□□□□ -1.14
Pcdh9-207ENSMUST00000195376 Rsf1E9PWW9 1441 aaKnown RBP7.89□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 Dcaf1Q80TR8 1506 aa7.89□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 NclP09405 707 aaKnown RBP7.87□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 HrcG5E8J6 738 aa7.86□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 Ythdc1E9Q5K9 736 aaKnown RBP7.85□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 Rtl5Q5DTT4 599 aa7.85□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 Cep164Q5DU05 1446 aa7.85□□□□□ -1.15
Pcdh9-207ENSMUST00000195376 Baz1aO88379 1555 aa7.83□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Kif15Q6P9L6 1387 aa7.83□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Sycp2Q9CUU3 1500 aa7.82□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Ccdc18Q640L5 1455 aa7.8□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Safb2Q80YR5 991 aaKnown RBP7.8□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Hdac5Q9Z2V6 1113 aa7.79□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Plppr3Q7TPB0 716 aa7.79□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Ap3b1Q9Z1T1 1105 aa7.79□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 ScribQ80U72 1612 aa7.78□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Fkbp15Q6P9Q6 1216 aaKnown RBP7.78□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Ehmt2Q9Z148 1263 aaKnown RBP7.78□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Phldb1Q6PDH0 1371 aaKnown RBP7.77□□□□□ -1.16
Pcdh9-207ENSMUST00000195376 Os9Q8K2C7 672 aa7.75□□□□□ -1.17
Pcdh9-207ENSMUST00000195376 Atad2bE9Q166 1460 aaKnown RBP7.74□□□□□ -1.17
Pcdh9-207ENSMUST00000195376 Tnnt3Q9QZ47 272 aa7.72□□□□□ -1.17
Pcdh9-207ENSMUST00000195376 Cdk11bP24788 784 aaKnown RBP7.72□□□□□ -1.17
Pcdh9-207ENSMUST00000195376 UbtfP25976 765 aaKnown RBP7.71□□□□□ -1.17
Pcdh9-207ENSMUST00000195376 Gm13695A2AK44 830 aa7.71□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 DiexfQ8BTT6 772 aaKnown RBP7.7□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Fam50aQ9WV03 339 aaKnown RBP7.7□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Hnrnpul2Q00PI9 745 aaKnown RBP7.69□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Crybg2B7ZCC2 1516 aa7.68□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 NeflP08551 543 aa7.68□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Ppp1r18Q8BQ30 594 aa7.68□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Pabpn1Q8CCS6 302 aaKnown RBP7.67□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Anp32bQ9EST5 272 aaKnown RBP7.66□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 NefmP08553 848 aa7.65□□□□□ -1.18
Pcdh9-207ENSMUST00000195376 Lmod2Q3UHZ5 550 aa7.63□□□□□ -1.19
Pcdh9-207ENSMUST00000195376 Arhgap27A2AB59 869 aa7.63□□□□□ -1.19
Pcdh9-207ENSMUST00000195376 Atp1b4Q99ME6 356 aa7.61□□□□□ -1.19
Pcdh9-207ENSMUST00000195376 Zbtb7cQ8VCZ7 619 aa7.6□□□□□ -1.19
Pcdh9-207ENSMUST00000195376 Clstn2Q9ER65 966 aa7.59□□□□□ -1.19
Pcdh9-207ENSMUST00000195376 Cux2P70298 1426 aa7.59□□□□□ -1.19
Pcdh9-207ENSMUST00000195376 CatipB9EKE5 520 aa7.57□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 Golga3P55937 1487 aa7.57□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 MyclP10166 368 aa7.56□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 Erich6D3Z6S9 713 aa7.56□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 NrdcQ8BHG1 1161 aa7.56□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 Smarca4Q3TKT4 1613 aaKnown RBP7.55□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 AknaQ80VW7 1404 aa7.54□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 Smarca2Q6DIC0 1577 aa7.53□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 Slc24a1Q91WD8 1130 aa7.52□□□□□ -1.2
Pcdh9-207ENSMUST00000195376 Rsph4aQ8BYM7 716 aa7.5□□□□□ -1.21
Pcdh9-207ENSMUST00000195376 MlecQ6ZQI3 291 aaKnown RBP7.5□□□□□ -1.21
Pcdh9-207ENSMUST00000195376 Clip1Q922J3 1391 aa7.5□□□□□ -1.21
Pcdh9-207ENSMUST00000195376 Plekhg3Q4VAC9 1341 aa7.49□□□□□ -1.21
Pcdh9-207ENSMUST00000195376 Neurod1Q60867 357 aa7.49□□□□□ -1.21
Pcdh9-207ENSMUST00000195376 Iqgap2Q3UQ44 1575 aa7.46□□□□□ -1.21
Pcdh9-207ENSMUST00000195376 Mrc2Q64449 1479 aa7.46□□□□□ -1.22
Pcdh9-207ENSMUST00000195376 DaxxO35613 739 aa7.45□□□□□ -1.22
Pcdh9-207ENSMUST00000195376 Baz1bQ9Z277 1479 aa7.45□□□□□ -1.22
Pcdh9-207ENSMUST00000195376 CftrP26361 1476 aa7.44□□□□□ -1.22
Pcdh9-207ENSMUST00000195376 Ccer2J3QPU5 274 aa7.44□□□□□ -1.22
Pcdh9-207ENSMUST00000195376 Chic1Q8CBW7 227 aa7.44□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms