RNA–Protein interactions for RNA: ENSMUST00000192931.1

Pcdhgb1-201, Transcript of Protocadherin gamma B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb1, Length 4,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1-201ENSMUST00000192931 Rhox8Q6VSS7 320 aa22.74■■□□□ 1.23
Pcdhgb1-201ENSMUST00000192931 Rpgrip1Q9EPQ2 1331 aa21.53■■□□□ 1.04
Pcdhgb1-201ENSMUST00000192931 Ehmt2Q9Z148 1263 aaKnown RBP21.27■■□□□ 1
Pcdhgb1-201ENSMUST00000192931 Acin1Q9JIX8 1338 aaKnown RBP21■□□□□ 0.95
Pcdhgb1-201ENSMUST00000192931 Pcgf6Q99NA9 353 aa20.96■□□□□ 0.95
Pcdhgb1-201ENSMUST00000192931 NischQ80TM9 1593 aa20.77■□□□□ 0.92
Pcdhgb1-201ENSMUST00000192931 Supt5hO55201 1082 aaKnown RBP20.42■□□□□ 0.86
Pcdhgb1-201ENSMUST00000192931 Ccdc180J3QNE4 1664 aa20.42■□□□□ 0.86
Pcdhgb1-201ENSMUST00000192931 Neurod1Q60867 357 aa20.31■□□□□ 0.84
Pcdhgb1-201ENSMUST00000192931 Ccdc136Q3TVA9 1136 aa20.28■□□□□ 0.84
Pcdhgb1-201ENSMUST00000192931 Rtl1Q7M732 1744 aa20.27■□□□□ 0.84
Pcdhgb1-201ENSMUST00000192931 Esf1Q3V1V3 845 aaKnown RBP20.19■□□□□ 0.82
Pcdhgb1-201ENSMUST00000192931 Trim41Q5NCC3 630 aa20.04■□□□□ 0.8
Pcdhgb1-201ENSMUST00000192931 Cngb1E1AZ71 1325 aa20.02■□□□□ 0.79
Pcdhgb1-201ENSMUST00000192931 Las1lA2BE28 776 aaKnown RBP20.01■□□□□ 0.79
Pcdhgb1-201ENSMUST00000192931 Zeb1Q64318 1117 aa20.01■□□□□ 0.79
Pcdhgb1-201ENSMUST00000192931 Abcc9P70170 1546 aa19.97■□□□□ 0.79
Pcdhgb1-201ENSMUST00000192931 1700123L14RikQ3V2K7 440 aa19.82■□□□□ 0.76
Pcdhgb1-201ENSMUST00000192931 Csrnp3P59055 597 aa19.76■□□□□ 0.75
Pcdhgb1-201ENSMUST00000192931 Dcaf1Q80TR8 1506 aa19.76■□□□□ 0.75
Pcdhgb1-201ENSMUST00000192931 Gab3Q8BSM5 595 aa19.63■□□□□ 0.73
Pcdhgb1-201ENSMUST00000192931 HrcG5E8J6 738 aa19.63■□□□□ 0.73
Pcdhgb1-201ENSMUST00000192931 CenpbP27790 599 aa19.6■□□□□ 0.73
Pcdhgb1-201ENSMUST00000192931 Zcchc6Q5BLK4 1491 aaKnown RBP19.6■□□□□ 0.73
Pcdhgb1-201ENSMUST00000192931 Npm2Q80W85 207 aa19.59■□□□□ 0.73
Pcdhgb1-201ENSMUST00000192931 Gm38655A0A286YDK6 273 aa19.54■□□□□ 0.72
Pcdhgb1-201ENSMUST00000192931 Sall2Q9QX96 1004 aa19.53■□□□□ 0.72
Pcdhgb1-201ENSMUST00000192931 Anks4bQ8K3X6 423 aa19.4■□□□□ 0.7
Pcdhgb1-201ENSMUST00000192931 DiexfQ8BTT6 772 aaKnown RBP19.37■□□□□ 0.69
Pcdhgb1-201ENSMUST00000192931 Myt1lP97500 1187 aa19.36■□□□□ 0.69
Pcdhgb1-201ENSMUST00000192931 Ppargc1bQ8VHJ7 1014 aa19.36■□□□□ 0.69
Pcdhgb1-201ENSMUST00000192931 Wdr66E9Q743 1299 aa19.35■□□□□ 0.69
Pcdhgb1-201ENSMUST00000192931 Ube2uB1AUC4 352 aa19.34■□□□□ 0.69
Pcdhgb1-201ENSMUST00000192931 Abcc8B2RUS7 1588 aa19.31■□□□□ 0.68
Pcdhgb1-201ENSMUST00000192931 Myt1Q8CFC2 1127 aa19.25■□□□□ 0.67
Pcdhgb1-201ENSMUST00000192931 Gm35339A0A140LHH9 1649 aa19.23■□□□□ 0.67
Pcdhgb1-201ENSMUST00000192931 NefmP08553 848 aa19.17■□□□□ 0.66
Pcdhgb1-201ENSMUST00000192931 Mier1Q5UAK0 511 aa19.17■□□□□ 0.66
Pcdhgb1-201ENSMUST00000192931 Cdk11bP24788 784 aaKnown RBP19.14■□□□□ 0.65
Pcdhgb1-201ENSMUST00000192931 Aplp2Q06335 707 aa19.13■□□□□ 0.65
Pcdhgb1-201ENSMUST00000192931 Nop58Q6DFW4 536 aaKnown RBP19.09■□□□□ 0.65
Pcdhgb1-201ENSMUST00000192931 Bcl11aQ9QYE3 773 aa19.08■□□□□ 0.65
Pcdhgb1-201ENSMUST00000192931 Aebp2Q9Z248 504 aaKnown RBP19.01■□□□□ 0.63
Pcdhgb1-201ENSMUST00000192931 Il27Q8K3I6 234 aa18.99■□□□□ 0.63
Pcdhgb1-201ENSMUST00000192931 Mapk8ip2Q9ERE9 830 aa18.89■□□□□ 0.61
Pcdhgb1-201ENSMUST00000192931 Fam71e1A1L3C1 212 aa18.85■□□□□ 0.61
Pcdhgb1-201ENSMUST00000192931 UbtfP25976 765 aaKnown RBP18.82■□□□□ 0.6
Pcdhgb1-201ENSMUST00000192931 PrkcshO08795 521 aa18.76■□□□□ 0.59
Pcdhgb1-201ENSMUST00000192931 SafbD3YXK2 937 aaKnown RBP18.75■□□□□ 0.59
Pcdhgb1-201ENSMUST00000192931 Ifnlr1Q8CGK5 535 aa18.73■□□□□ 0.59
Pcdhgb1-201ENSMUST00000192931 ClspnQ80YR7 1315 aa18.71■□□□□ 0.59
Pcdhgb1-201ENSMUST00000192931 Cep164Q5DU05 1446 aa18.7■□□□□ 0.58
Pcdhgb1-201ENSMUST00000192931 Chic1Q8CBW7 227 aa18.62■□□□□ 0.57
Pcdhgb1-201ENSMUST00000192931 Pelp1Q9DBD5 1123 aaKnown RBP18.59■□□□□ 0.57
Pcdhgb1-201ENSMUST00000192931 Hnrnpul2Q00PI9 745 aaKnown RBP18.58■□□□□ 0.57
Pcdhgb1-201ENSMUST00000192931 Ap3b1Q9Z1T1 1105 aa18.54■□□□□ 0.56
Pcdhgb1-201ENSMUST00000192931 Npm1Q61937 292 aaKnown RBP18.47■□□□□ 0.55
Pcdhgb1-201ENSMUST00000192931 Ttbk1Q6PCN3 1308 aa18.4■□□□□ 0.54
Pcdhgb1-201ENSMUST00000192931 TonslQ6NZL6 1363 aa18.4■□□□□ 0.54
Pcdhgb1-201ENSMUST00000192931 Fam50aQ9WV03 339 aaKnown RBP18.36■□□□□ 0.53
Pcdhgb1-201ENSMUST00000192931 Stra8P70278 393 aa18.32■□□□□ 0.52
Pcdhgb1-201ENSMUST00000192931 Rsf1E9PWW9 1441 aaKnown RBP18.31■□□□□ 0.52
Pcdhgb1-201ENSMUST00000192931 Amer1Q7TS75 1132 aa18.29■□□□□ 0.52
Pcdhgb1-201ENSMUST00000192931 Rb1cc1Q9ESK9 1588 aa18.29■□□□□ 0.52
Pcdhgb1-201ENSMUST00000192931 Brd4Q9ESU6 1400 aaKnown RBP18.28■□□□□ 0.52
Pcdhgb1-201ENSMUST00000192931 Tnnt3Q9QZ47 272 aa18.27■□□□□ 0.52
Pcdhgb1-201ENSMUST00000192931 Anp32aO35381 247 aa18.23■□□□□ 0.51
Pcdhgb1-201ENSMUST00000192931 Eid3Q3V124 375 aa18.12■□□□□ 0.49
Pcdhgb1-201ENSMUST00000192931 Nolc1E9Q5C9 702 aaKnown RBP18.1■□□□□ 0.49
Pcdhgb1-201ENSMUST00000192931 NclP09405 707 aaKnown RBP18.09■□□□□ 0.49
Pcdhgb1-201ENSMUST00000192931 Slc24a1Q91WD8 1130 aa18.09■□□□□ 0.49
Pcdhgb1-201ENSMUST00000192931 NacadQ5SWP3 1504 aa18.09■□□□□ 0.49
Pcdhgb1-201ENSMUST00000192931 Anp32bQ9EST5 272 aaKnown RBP18.07■□□□□ 0.48
Pcdhgb1-201ENSMUST00000192931 Ccdc88bQ4QRL3 1481 aa18.06■□□□□ 0.48
Pcdhgb1-201ENSMUST00000192931 Lmod2Q3UHZ5 550 aa18■□□□□ 0.47
Pcdhgb1-201ENSMUST00000192931 Os9Q8K2C7 672 aa18■□□□□ 0.47
Pcdhgb1-201ENSMUST00000192931 Ubl4bQ9CQ84 188 aa18■□□□□ 0.47
Pcdhgb1-201ENSMUST00000192931 Plekhg3Q4VAC9 1341 aa17.99■□□□□ 0.47
Pcdhgb1-201ENSMUST00000192931 Hdac5Q9Z2V6 1113 aa17.98■□□□□ 0.47
Pcdhgb1-201ENSMUST00000192931 Calr4Q3TQS0 420 aa17.96■□□□□ 0.47
Pcdhgb1-201ENSMUST00000192931 Baz1aO88379 1555 aa17.95■□□□□ 0.46
Pcdhgb1-201ENSMUST00000192931 NrdcQ8BHG1 1161 aa17.94■□□□□ 0.46
Pcdhgb1-201ENSMUST00000192931 Rtl5Q5DTT4 599 aa17.93■□□□□ 0.46
Pcdhgb1-201ENSMUST00000192931 Supt16hQ920B9 1047 aa17.9■□□□□ 0.46
Pcdhgb1-201ENSMUST00000192931 Ppp4r2Q0VGB7 417 aa17.89■□□□□ 0.45
Pcdhgb1-201ENSMUST00000192931 Eif5bQ05D44 1216 aaKnown RBP17.88■□□□□ 0.45
Pcdhgb1-201ENSMUST00000192931 Znf710Q3U288 666 aa17.84■□□□□ 0.45
Pcdhgb1-201ENSMUST00000192931 Clip1Q922J3 1391 aa17.79■□□□□ 0.44
Pcdhgb1-201ENSMUST00000192931 Zbtb7cQ8VCZ7 619 aa17.77■□□□□ 0.43
Pcdhgb1-201ENSMUST00000192931 Pak3Q61036 559 aa17.69■□□□□ 0.42
Pcdhgb1-201ENSMUST00000192931 Fkbp15Q6P9Q6 1216 aaKnown RBP17.69■□□□□ 0.42
Pcdhgb1-201ENSMUST00000192931 Wdr43Q6ZQL4 677 aaKnown RBP17.69■□□□□ 0.42
Pcdhgb1-201ENSMUST00000192931 Plcd4Q8K3R3 807 aa17.68■□□□□ 0.42
Pcdhgb1-201ENSMUST00000192931 Gm13697A2AK42 830 aa17.67■□□□□ 0.42
Pcdhgb1-201ENSMUST00000192931 P3h3Q8CG70 732 aa17.64■□□□□ 0.41
Pcdhgb1-201ENSMUST00000192931 Upf2A2AT37 1269 aaKnown RBP17.64■□□□□ 0.41
Pcdhgb1-201ENSMUST00000192931 Golga3P55937 1487 aa17.63■□□□□ 0.41
Pcdhgb1-201ENSMUST00000192931 Gtf3c3Q3TMP1 882 aa17.63■□□□□ 0.41
Pcdhgb1-201ENSMUST00000192931 NeflP08551 543 aa17.61■□□□□ 0.41
Pcdhgb1-201ENSMUST00000192931 Slc4a3P16283 1227 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms