RNA–Protein interactions for RNA: ENSMUST00000189823.1

Gm28515-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28515, Length 2,530 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28515-201ENSMUST00000189823 NischQ80TM9 1593 aa15.02■□□□□ -0
Gm28515-201ENSMUST00000189823 Gm35339A0A140LHH9 1649 aa14.92□□□□□ -0.02
Gm28515-201ENSMUST00000189823 Abcc9P70170 1546 aa14.51□□□□□ -0.09
Gm28515-201ENSMUST00000189823 Abcc8B2RUS7 1588 aa14.41□□□□□ -0.1
Gm28515-201ENSMUST00000189823 ScribQ80U72 1612 aa13.76□□□□□ -0.21
Gm28515-201ENSMUST00000189823 Rhox8Q6VSS7 320 aa13.52□□□□□ -0.24
Gm28515-201ENSMUST00000189823 Kdm5dQ62240 1548 aa13.38□□□□□ -0.27
Gm28515-201ENSMUST00000189823 NacadQ5SWP3 1504 aa13.29□□□□□ -0.28
Gm28515-201ENSMUST00000189823 Dcaf1Q80TR8 1506 aa13.19□□□□□ -0.3
Gm28515-201ENSMUST00000189823 Rb1cc1Q9ESK9 1588 aa13.12□□□□□ -0.31
Gm28515-201ENSMUST00000189823 Sycp2Q9CUU3 1500 aa13.04□□□□□ -0.32
Gm28515-201ENSMUST00000189823 Baz1aO88379 1555 aa12.9□□□□□ -0.34
Gm28515-201ENSMUST00000189823 BicraF8VPZ9 1578 aa12.87□□□□□ -0.35
Gm28515-201ENSMUST00000189823 Rpgrip1Q9EPQ2 1331 aa12.86□□□□□ -0.35
Gm28515-201ENSMUST00000189823 Zcchc6Q5BLK4 1491 aaKnown RBP12.82□□□□□ -0.36
Gm28515-201ENSMUST00000189823 Ccdc180J3QNE4 1664 aa12.73□□□□□ -0.37
Gm28515-201ENSMUST00000189823 Crybg2B7ZCC2 1516 aa12.69□□□□□ -0.38
Gm28515-201ENSMUST00000189823 Ccdc136Q3TVA9 1136 aa12.66□□□□□ -0.38
Gm28515-201ENSMUST00000189823 Smarca2Q6DIC0 1577 aa12.57□□□□□ -0.4
Gm28515-201ENSMUST00000189823 Cecr2E9Q2Z1 1453 aa12.56□□□□□ -0.4
Gm28515-201ENSMUST00000189823 Rtl1Q7M732 1744 aa12.56□□□□□ -0.4
Gm28515-201ENSMUST00000189823 Pds5bQ4VA53 1446 aaKnown RBP12.36□□□□□ -0.43
Gm28515-201ENSMUST00000189823 Smarca4Q3TKT4 1613 aaKnown RBP12.34□□□□□ -0.43
Gm28515-201ENSMUST00000189823 Dnajc5bQ9CQ94 199 aa12.33□□□□□ -0.44
Gm28515-201ENSMUST00000189823 Atad2bE9Q166 1460 aaKnown RBP12.32□□□□□ -0.44
Gm28515-201ENSMUST00000189823 Mapk8ip2Q9ERE9 830 aa12.3□□□□□ -0.44
Gm28515-201ENSMUST00000189823 Myt1Q8CFC2 1127 aa12.28□□□□□ -0.44
Gm28515-201ENSMUST00000189823 Synj1Q8CHC4 1574 aa12.28□□□□□ -0.44
Gm28515-201ENSMUST00000189823 Iqgap2Q3UQ44 1575 aa12.27□□□□□ -0.45
Gm28515-201ENSMUST00000189823 Pcgf6Q99NA9 353 aa12.26□□□□□ -0.45
Gm28515-201ENSMUST00000189823 Trim41Q5NCC3 630 aa12.25□□□□□ -0.45
Gm28515-201ENSMUST00000189823 Brd4Q9ESU6 1400 aaKnown RBP12.23□□□□□ -0.45
Gm28515-201ENSMUST00000189823 CftrP26361 1476 aa12.23□□□□□ -0.45
Gm28515-201ENSMUST00000189823 Esf1Q3V1V3 845 aaKnown RBP12.19□□□□□ -0.46
Gm28515-201ENSMUST00000189823 Thoc2B1AZI6 1594 aaKnown RBP12.14□□□□□ -0.47
Gm28515-201ENSMUST00000189823 Frmpd1A2AKB4 1549 aa12.13□□□□□ -0.47
Gm28515-201ENSMUST00000189823 Cttnbp2B9EJA2 1648 aa12.13□□□□□ -0.47
Gm28515-201ENSMUST00000189823 Ercc6F8VPZ5 1481 aa12.13□□□□□ -0.47
Gm28515-201ENSMUST00000189823 Cngb1E1AZ71 1325 aa12.12□□□□□ -0.47
Gm28515-201ENSMUST00000189823 Wdr62Q3U3T8 1523 aa12.09□□□□□ -0.47
Gm28515-201ENSMUST00000189823 Cc2d2aQ8CFW7 1633 aa12.06□□□□□ -0.48
Gm28515-201ENSMUST00000189823 Las1lA2BE28 776 aaKnown RBP12.03□□□□□ -0.48
Gm28515-201ENSMUST00000189823 DiexfQ8BTT6 772 aaKnown RBP12.03□□□□□ -0.48
Gm28515-201ENSMUST00000189823 Chic1Q8CBW7 227 aa12.01□□□□□ -0.49
Gm28515-201ENSMUST00000189823 Acin1Q9JIX8 1338 aaKnown RBP11.98□□□□□ -0.49
Gm28515-201ENSMUST00000189823 CenpbP27790 599 aa11.97□□□□□ -0.49
Gm28515-201ENSMUST00000189823 Ubl4bQ9CQ84 188 aa11.97□□□□□ -0.49
Gm28515-201ENSMUST00000189823 Unc13aQ4KUS2 1712 aa11.97□□□□□ -0.49
Gm28515-201ENSMUST00000189823 Golga3P55937 1487 aa11.96□□□□□ -0.5
Gm28515-201ENSMUST00000189823 Phldb1Q6PDH0 1371 aaKnown RBP11.95□□□□□ -0.5
Gm28515-201ENSMUST00000189823 Fam135aQ6NS59 1506 aa11.91□□□□□ -0.5
Gm28515-201ENSMUST00000189823 Rsf1E9PWW9 1441 aaKnown RBP11.86□□□□□ -0.51
Gm28515-201ENSMUST00000189823 Kif15Q6P9L6 1387 aa11.86□□□□□ -0.51
Gm28515-201ENSMUST00000189823 Top2bQ64511 1612 aa11.85□□□□□ -0.51
Gm28515-201ENSMUST00000189823 Ccdc88bQ4QRL3 1481 aa11.85□□□□□ -0.51
Gm28515-201ENSMUST00000189823 Il27Q8K3I6 234 aa11.84□□□□□ -0.51
Gm28515-201ENSMUST00000189823 Cux2P70298 1426 aa11.76□□□□□ -0.53
Gm28515-201ENSMUST00000189823 HrcG5E8J6 738 aa11.74□□□□□ -0.53
Gm28515-201ENSMUST00000189823 Lamc3Q9R0B6 1581 aa11.74□□□□□ -0.53
Gm28515-201ENSMUST00000189823 Gab3Q8BSM5 595 aa11.73□□□□□ -0.53
Gm28515-201ENSMUST00000189823 Fmn1Q05860 1466 aa11.71□□□□□ -0.53
Gm28515-201ENSMUST00000189823 Mrc2Q64449 1479 aa11.69□□□□□ -0.54
Gm28515-201ENSMUST00000189823 Npm1Q61937 292 aaKnown RBP11.69□□□□□ -0.54
Gm28515-201ENSMUST00000189823 Bcl11aQ9QYE3 773 aa11.68□□□□□ -0.54
Gm28515-201ENSMUST00000189823 TnnQ80Z71 1560 aa11.67□□□□□ -0.54
Gm28515-201ENSMUST00000189823 Neurod1Q60867 357 aa11.62□□□□□ -0.55
Gm28515-201ENSMUST00000189823 Camsap1A2AHC3 1581 aa11.6□□□□□ -0.55
Gm28515-201ENSMUST00000189823 Cep164Q5DU05 1446 aa11.6□□□□□ -0.55
Gm28515-201ENSMUST00000189823 Ccdc18Q640L5 1455 aa11.59□□□□□ -0.55
Gm28515-201ENSMUST00000189823 Kif21aQ9QXL2 1672 aa11.58□□□□□ -0.56
Gm28515-201ENSMUST00000189823 Amer1Q7TS75 1132 aa11.57□□□□□ -0.56
Gm28515-201ENSMUST00000189823 1700123L14RikQ3V2K7 440 aa11.57□□□□□ -0.56
Gm28515-201ENSMUST00000189823 Top2aQ01320 1528 aaKnown RBP11.57□□□□□ -0.56
Gm28515-201ENSMUST00000189823 LrpprcQ6PB66 1392 aaKnown RBP11.54□□□□□ -0.56
Gm28515-201ENSMUST00000189823 Dhx29Q6PGC1 1365 aaKnown RBP11.53□□□□□ -0.56
Gm28515-201ENSMUST00000189823 Baz1bQ9Z277 1479 aa11.53□□□□□ -0.56
Gm28515-201ENSMUST00000189823 PtprkP35822 1457 aa11.51□□□□□ -0.57
Gm28515-201ENSMUST00000189823 Npm2Q80W85 207 aa11.5□□□□□ -0.57
Gm28515-201ENSMUST00000189823 Grin2bQ01097 1482 aa11.49□□□□□ -0.57
Gm28515-201ENSMUST00000189823 PogzQ8BZH4 1409 aaKnown RBP11.47□□□□□ -0.57
Gm28515-201ENSMUST00000189823 Duox2A2AQ99 1517 aa11.46□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Plb1Q3TTY0 1478 aa11.45□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Lrriq1Q0P5X1 1673 aa11.44□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Myt1lP97500 1187 aa11.44□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Zeb1Q64318 1117 aa11.44□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Rapgef2Q8CHG7 1496 aa11.43□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Urb2E9Q7L1 1524 aaKnown RBP11.42□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Crocc2F6XLV1 1638 aa11.41□□□□□ -0.58
Gm28515-201ENSMUST00000189823 Aplp2Q06335 707 aa11.4□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Supt5hO55201 1082 aaKnown RBP11.39□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Shroom4Q1W617 1475 aa11.38□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Rad54l2Q99NG0 1466 aa11.38□□□□□ -0.59
Gm28515-201ENSMUST00000189823 NrkQ9R0G8 1455 aa11.38□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Samd9lQ69Z37 1561 aa11.38□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Efcab5A0JP43 1406 aa11.36□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Anks4bQ8K3X6 423 aa11.36□□□□□ -0.59
Gm28515-201ENSMUST00000189823 Cep162Q6ZQ06 1403 aa11.33□□□□□ -0.6
Gm28515-201ENSMUST00000189823 Disp1Q3TDN0 1521 aa11.3□□□□□ -0.6
Gm28515-201ENSMUST00000189823 Ehmt2Q9Z148 1263 aaKnown RBP11.3□□□□□ -0.6
Gm28515-201ENSMUST00000189823 Arhgap35Q91YM2 1499 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms