RNA–Protein interactions for RNA: ENSMUST00000189207.1

Gm28254-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28254, Length 2,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28254-201ENSMUST00000189207 Gm35339A0A140LHH9 1649 aa15.89■□□□□ 0.13
Gm28254-201ENSMUST00000189207 NischQ80TM9 1593 aa15.57■□□□□ 0.08
Gm28254-201ENSMUST00000189207 Abcc9P70170 1546 aa15.32■□□□□ 0.04
Gm28254-201ENSMUST00000189207 Abcc8B2RUS7 1588 aa15.16■□□□□ 0.02
Gm28254-201ENSMUST00000189207 ScribQ80U72 1612 aa14.85□□□□□ -0.03
Gm28254-201ENSMUST00000189207 NacadQ5SWP3 1504 aa14.33□□□□□ -0.12
Gm28254-201ENSMUST00000189207 Kdm5dQ62240 1548 aa14.27□□□□□ -0.12
Gm28254-201ENSMUST00000189207 Dnajc5bQ9CQ94 199 aa14.26□□□□□ -0.13
Gm28254-201ENSMUST00000189207 Sycp2Q9CUU3 1500 aa14.07□□□□□ -0.16
Gm28254-201ENSMUST00000189207 Myt1Q8CFC2 1127 aa14.04□□□□□ -0.16
Gm28254-201ENSMUST00000189207 Rpgrip1Q9EPQ2 1331 aa13.99□□□□□ -0.17
Gm28254-201ENSMUST00000189207 DiexfQ8BTT6 772 aaKnown RBP13.97□□□□□ -0.17
Gm28254-201ENSMUST00000189207 Chic1Q8CBW7 227 aa13.97□□□□□ -0.17
Gm28254-201ENSMUST00000189207 BicraF8VPZ9 1578 aa13.96□□□□□ -0.18
Gm28254-201ENSMUST00000189207 Dcaf1Q80TR8 1506 aa13.83□□□□□ -0.2
Gm28254-201ENSMUST00000189207 Thoc2B1AZI6 1594 aaKnown RBP13.66□□□□□ -0.22
Gm28254-201ENSMUST00000189207 Pds5bQ4VA53 1446 aaKnown RBP13.64□□□□□ -0.23
Gm28254-201ENSMUST00000189207 Amer1Q7TS75 1132 aa13.56□□□□□ -0.24
Gm28254-201ENSMUST00000189207 Pcgf6Q99NA9 353 aa13.54□□□□□ -0.24
Gm28254-201ENSMUST00000189207 CatipB9EKE5 520 aa13.54□□□□□ -0.24
Gm28254-201ENSMUST00000189207 Rb1cc1Q9ESK9 1588 aa13.52□□□□□ -0.24
Gm28254-201ENSMUST00000189207 CenpbP27790 599 aa13.51□□□□□ -0.25
Gm28254-201ENSMUST00000189207 Cc2d2aQ8CFW7 1633 aa13.45□□□□□ -0.26
Gm28254-201ENSMUST00000189207 Atad2bE9Q166 1460 aaKnown RBP13.43□□□□□ -0.26
Gm28254-201ENSMUST00000189207 Las1lA2BE28 776 aaKnown RBP13.39□□□□□ -0.27
Gm28254-201ENSMUST00000189207 Mapk8ip2Q9ERE9 830 aa13.38□□□□□ -0.27
Gm28254-201ENSMUST00000189207 Rhox8Q6VSS7 320 aa13.36□□□□□ -0.27
Gm28254-201ENSMUST00000189207 Ercc6F8VPZ5 1481 aa13.34□□□□□ -0.27
Gm28254-201ENSMUST00000189207 Baz1aO88379 1555 aa13.29□□□□□ -0.28
Gm28254-201ENSMUST00000189207 Crybg2B7ZCC2 1516 aa13.29□□□□□ -0.28
Gm28254-201ENSMUST00000189207 Bcl11aQ9QYE3 773 aa13.28□□□□□ -0.28
Gm28254-201ENSMUST00000189207 Dnajc5P60904 198 aa13.27□□□□□ -0.28
Gm28254-201ENSMUST00000189207 Fam135aQ6NS59 1506 aa13.26□□□□□ -0.29
Gm28254-201ENSMUST00000189207 Ube2uB1AUC4 352 aa13.23□□□□□ -0.29
Gm28254-201ENSMUST00000189207 Smarca2Q6DIC0 1577 aa13.23□□□□□ -0.29
Gm28254-201ENSMUST00000189207 Zcchc6Q5BLK4 1491 aaKnown RBP13.22□□□□□ -0.29
Gm28254-201ENSMUST00000189207 Ccdc180J3QNE4 1664 aa13.17□□□□□ -0.3
Gm28254-201ENSMUST00000189207 Smarca4Q3TKT4 1613 aaKnown RBP13.15□□□□□ -0.3
Gm28254-201ENSMUST00000189207 Iqgap2Q3UQ44 1575 aa13.15□□□□□ -0.31
Gm28254-201ENSMUST00000189207 Phldb1Q6PDH0 1371 aaKnown RBP13.12□□□□□ -0.31
Gm28254-201ENSMUST00000189207 Trim41Q5NCC3 630 aa13.1□□□□□ -0.31
Gm28254-201ENSMUST00000189207 Frmpd1A2AKB4 1549 aa13.1□□□□□ -0.31
Gm28254-201ENSMUST00000189207 Wdr62Q3U3T8 1523 aa13.09□□□□□ -0.31
Gm28254-201ENSMUST00000189207 Ubl4bQ9CQ84 188 aa13.08□□□□□ -0.32
Gm28254-201ENSMUST00000189207 Baz1bQ9Z277 1479 aa13.05□□□□□ -0.32
Gm28254-201ENSMUST00000189207 Ttbk1Q6PCN3 1308 aa13.05□□□□□ -0.32
Gm28254-201ENSMUST00000189207 Cecr2E9Q2Z1 1453 aa13.04□□□□□ -0.32
Gm28254-201ENSMUST00000189207 Mrc2Q64449 1479 aa12.98□□□□□ -0.33
Gm28254-201ENSMUST00000189207 Unc13aQ4KUS2 1712 aa12.88□□□□□ -0.35
Gm28254-201ENSMUST00000189207 Phf23Q8BSN5 401 aa12.85□□□□□ -0.35
Gm28254-201ENSMUST00000189207 Plppr3Q7TPB0 716 aa12.8□□□□□ -0.36
Gm28254-201ENSMUST00000189207 PrkcshO08795 521 aa12.8□□□□□ -0.36
Gm28254-201ENSMUST00000189207 Lrriq1Q0P5X1 1673 aa12.72□□□□□ -0.37
Gm28254-201ENSMUST00000189207 Acin1Q9JIX8 1338 aaKnown RBP12.68□□□□□ -0.38
Gm28254-201ENSMUST00000189207 Rsf1E9PWW9 1441 aaKnown RBP12.68□□□□□ -0.38
Gm28254-201ENSMUST00000189207 1700123L14RikQ3V2K7 440 aa12.67□□□□□ -0.38
Gm28254-201ENSMUST00000189207 CftrP26361 1476 aa12.64□□□□□ -0.39
Gm28254-201ENSMUST00000189207 Cttnbp2B9EJA2 1648 aa12.61□□□□□ -0.39
Gm28254-201ENSMUST00000189207 Shroom2A2ALU4 1481 aa12.6□□□□□ -0.39
Gm28254-201ENSMUST00000189207 Cux2P70298 1426 aa12.6□□□□□ -0.39
Gm28254-201ENSMUST00000189207 BccipQ9CWI3 316 aa12.59□□□□□ -0.39
Gm28254-201ENSMUST00000189207 Synj1Q8CHC4 1574 aa12.58□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Neurod1Q60867 357 aa12.56□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Kif21aQ9QXL2 1672 aa12.56□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Gtf3c5Q8R2T8 520 aa12.55□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Col17a1Q07563 1470 aa12.54□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Aplp2Q06335 707 aa12.53□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Pknox2Q8BG99 474 aa12.53□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Kif15Q6P9L6 1387 aa12.52□□□□□ -0.4
Gm28254-201ENSMUST00000189207 Eif4g3Q80XI3 1579 aaKnown RBP12.52□□□□□ -0.41
Gm28254-201ENSMUST00000189207 Brd4Q9ESU6 1400 aaKnown RBP12.49□□□□□ -0.41
Gm28254-201ENSMUST00000189207 Esf1Q3V1V3 845 aaKnown RBP12.47□□□□□ -0.41
Gm28254-201ENSMUST00000189207 Npm1Q61937 292 aaKnown RBP12.47□□□□□ -0.41
Gm28254-201ENSMUST00000189207 NrdcQ8BHG1 1161 aa12.47□□□□□ -0.41
Gm28254-201ENSMUST00000189207 Pabpn1Q8CCS6 302 aaKnown RBP12.47□□□□□ -0.41
Gm28254-201ENSMUST00000189207 ArxO35085 564 aa12.46□□□□□ -0.41
Gm28254-201ENSMUST00000189207 Cdk11bP24788 784 aaKnown RBP12.45□□□□□ -0.42
Gm28254-201ENSMUST00000189207 Cngb1E1AZ71 1325 aa12.44□□□□□ -0.42
Gm28254-201ENSMUST00000189207 Anks4bQ8K3X6 423 aa12.4□□□□□ -0.42
Gm28254-201ENSMUST00000189207 Top2bQ64511 1612 aa12.4□□□□□ -0.42
Gm28254-201ENSMUST00000189207 Fgd1P52734 960 aa12.39□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Ccdc136Q3TVA9 1136 aa12.39□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Urb2E9Q7L1 1524 aaKnown RBP12.38□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Pelp1Q9DBD5 1123 aaKnown RBP12.37□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Cep164Q5DU05 1446 aa12.35□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Lamc3Q9R0B6 1581 aa12.35□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Plb1Q3TTY0 1478 aa12.34□□□□□ -0.43
Gm28254-201ENSMUST00000189207 Dhx29Q6PGC1 1365 aaKnown RBP12.3□□□□□ -0.44
Gm28254-201ENSMUST00000189207 TimelessQ9R1X4 1197 aa12.28□□□□□ -0.44
Gm28254-201ENSMUST00000189207 Rtl1Q7M732 1744 aa12.28□□□□□ -0.44
Gm28254-201ENSMUST00000189207 Pcdh10E9PXQ7 1057 aa12.28□□□□□ -0.44
Gm28254-201ENSMUST00000189207 Il27Q8K3I6 234 aa12.27□□□□□ -0.45
Gm28254-201ENSMUST00000189207 Znf316Q6PGE4 1016 aa12.26□□□□□ -0.45
Gm28254-201ENSMUST00000189207 Zcchc11B2RX14 1644 aaKnown RBP12.26□□□□□ -0.45
Gm28254-201ENSMUST00000189207 LrpprcQ6PB66 1392 aaKnown RBP12.21□□□□□ -0.46
Gm28254-201ENSMUST00000189207 Rusc2Q80U22 1514 aa12.21□□□□□ -0.46
Gm28254-201ENSMUST00000189207 Crocc2F6XLV1 1638 aa12.2□□□□□ -0.46
Gm28254-201ENSMUST00000189207 Gab3Q8BSM5 595 aa12.2□□□□□ -0.46
Gm28254-201ENSMUST00000189207 Ccdc18Q640L5 1455 aa12.19□□□□□ -0.46
Gm28254-201ENSMUST00000189207 Ift140E9PY46 1464 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms