RNA–Protein interactions for RNA: ENSMUST00000178058.1

Gm3500-202, mousemouse

TSL 1 (best) BASIC

Gene Gm3500, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3500-202ENSMUST00000178058 Chic1Q8CBW7 227 aa21.9■■□□□ 1.1
Gm3500-202ENSMUST00000178058 Mapk8ip2Q9ERE9 830 aa21.23■□□□□ 0.99
Gm3500-202ENSMUST00000178058 Phf23Q8BSN5 401 aa19.66■□□□□ 0.74
Gm3500-202ENSMUST00000178058 Plppr3Q7TPB0 716 aa19.07■□□□□ 0.64
Gm3500-202ENSMUST00000178058 Gab3Q8BSM5 595 aa18.9■□□□□ 0.62
Gm3500-202ENSMUST00000178058 Senp3Q9EP97 568 aaKnown RBP18.07■□□□□ 0.48
Gm3500-202ENSMUST00000178058 Kcna4Q61423 654 aa17.43■□□□□ 0.38
Gm3500-202ENSMUST00000178058 Gm35339A0A140LHH9 1649 aa17.29■□□□□ 0.36
Gm3500-202ENSMUST00000178058 Abcc9P70170 1546 aa17■□□□□ 0.31
Gm3500-202ENSMUST00000178058 NischQ80TM9 1593 aa16.65■□□□□ 0.26
Gm3500-202ENSMUST00000178058 Abcc8B2RUS7 1588 aa16.34■□□□□ 0.21
Gm3500-202ENSMUST00000178058 ScribQ80U72 1612 aa16.33■□□□□ 0.2
Gm3500-202ENSMUST00000178058 Dnajc5bQ9CQ94 199 aa16.22■□□□□ 0.19
Gm3500-202ENSMUST00000178058 Trap1aP19473 224 aa16■□□□□ 0.15
Gm3500-202ENSMUST00000178058 Hoxd11P23813 323 aa15.91■□□□□ 0.14
Gm3500-202ENSMUST00000178058 Fam163aQ8CAA5 168 aa15.72■□□□□ 0.11
Gm3500-202ENSMUST00000178058 NacadQ5SWP3 1504 aa15.64■□□□□ 0.09
Gm3500-202ENSMUST00000178058 Dmrt2Q8BG36 561 aa15.59■□□□□ 0.09
Gm3500-202ENSMUST00000178058 Kdm5dQ62240 1548 aa15.55■□□□□ 0.08
Gm3500-202ENSMUST00000178058 Dnajc5P60904 198 aa15.53■□□□□ 0.08
Gm3500-202ENSMUST00000178058 Sycp2Q9CUU3 1500 aa15.38■□□□□ 0.05
Gm3500-202ENSMUST00000178058 Ppargc1bQ8VHJ7 1014 aa15.36■□□□□ 0.05
Gm3500-202ENSMUST00000178058 BicraF8VPZ9 1578 aa15.36■□□□□ 0.05
Gm3500-202ENSMUST00000178058 Thoc2B1AZI6 1594 aaKnown RBP15.31■□□□□ 0.04
Gm3500-202ENSMUST00000178058 Znf219Q6IQX8 726 aa15.29■□□□□ 0.04
Gm3500-202ENSMUST00000178058 Chrna2Q91X60 512 aa15.13■□□□□ 0.01
Gm3500-202ENSMUST00000178058 Pds5bQ4VA53 1446 aaKnown RBP15.05■□□□□ -0
Gm3500-202ENSMUST00000178058 Cc2d2aQ8CFW7 1633 aa15.03■□□□□ -0
Gm3500-202ENSMUST00000178058 Slc4a1apE9PX68 744 aa15.01□□□□□ -0.01
Gm3500-202ENSMUST00000178058 Rsph4aQ8BYM7 716 aa15.01□□□□□ -0.01
Gm3500-202ENSMUST00000178058 Trim41Q5NCC3 630 aa14.94□□□□□ -0.02
Gm3500-202ENSMUST00000178058 Dcaf1Q80TR8 1506 aa14.88□□□□□ -0.03
Gm3500-202ENSMUST00000178058 Rimbp2Q80U40 1072 aa14.78□□□□□ -0.04
Gm3500-202ENSMUST00000178058 Fam135aQ6NS59 1506 aa14.76□□□□□ -0.05
Gm3500-202ENSMUST00000178058 Atf5O70191 283 aa14.75□□□□□ -0.05
Gm3500-202ENSMUST00000178058 Atad2bE9Q166 1460 aaKnown RBP14.73□□□□□ -0.05
Gm3500-202ENSMUST00000178058 Ercc6F8VPZ5 1481 aa14.72□□□□□ -0.05
Gm3500-202ENSMUST00000178058 Ppp4r2Q0VGB7 417 aa14.67□□□□□ -0.06
Gm3500-202ENSMUST00000178058 Hs6st3Q9QYK4 470 aa14.64□□□□□ -0.07
Gm3500-202ENSMUST00000178058 ArsiQ32KI9 573 aa14.57□□□□□ -0.08
Gm3500-202ENSMUST00000178058 Baz1bQ9Z277 1479 aa14.52□□□□□ -0.08
Gm3500-202ENSMUST00000178058 Rb1cc1Q9ESK9 1588 aa14.51□□□□□ -0.09
Gm3500-202ENSMUST00000178058 Smarca2Q6DIC0 1577 aa14.48□□□□□ -0.09
Gm3500-202ENSMUST00000178058 Akt1s1Q9D1F4 257 aa14.45□□□□□ -0.1
Gm3500-202ENSMUST00000178058 Phldb1Q6PDH0 1371 aaKnown RBP14.43□□□□□ -0.1
Gm3500-202ENSMUST00000178058 Mrc2Q64449 1479 aa14.4□□□□□ -0.1
Gm3500-202ENSMUST00000178058 Wdr62Q3U3T8 1523 aa14.36□□□□□ -0.11
Gm3500-202ENSMUST00000178058 Ubl4bQ9CQ84 188 aa14.35□□□□□ -0.11
Gm3500-202ENSMUST00000178058 Iqgap2Q3UQ44 1575 aa14.34□□□□□ -0.11
Gm3500-202ENSMUST00000178058 Frmpd1A2AKB4 1549 aa14.34□□□□□ -0.11
Gm3500-202ENSMUST00000178058 1700123L14RikQ3V2K7 440 aa14.31□□□□□ -0.12
Gm3500-202ENSMUST00000178058 Smarca4Q3TKT4 1613 aaKnown RBP14.29□□□□□ -0.12
Gm3500-202ENSMUST00000178058 Shroom2A2ALU4 1481 aa14.27□□□□□ -0.12
Gm3500-202ENSMUST00000178058 Col17a1Q07563 1470 aa14.26□□□□□ -0.13
Gm3500-202ENSMUST00000178058 Crybg2B7ZCC2 1516 aa14.2□□□□□ -0.14
Gm3500-202ENSMUST00000178058 Lrriq1Q0P5X1 1673 aa14.2□□□□□ -0.14
Gm3500-202ENSMUST00000178058 Slc34a2Q9DBP0 697 aa14.2□□□□□ -0.14
Gm3500-202ENSMUST00000178058 Unc13aQ4KUS2 1712 aa14.2□□□□□ -0.14
Gm3500-202ENSMUST00000178058 Baz1aO88379 1555 aa14.17□□□□□ -0.14
Gm3500-202ENSMUST00000178058 Rsf1E9PWW9 1441 aaKnown RBP14.12□□□□□ -0.15
Gm3500-202ENSMUST00000178058 Zcchc6Q5BLK4 1491 aaKnown RBP14.12□□□□□ -0.15
Gm3500-202ENSMUST00000178058 Bach1P97302 739 aa14.07□□□□□ -0.16
Gm3500-202ENSMUST00000178058 Ccdc180J3QNE4 1664 aa14.07□□□□□ -0.16
Gm3500-202ENSMUST00000178058 Pcdh10E9PXQ7 1057 aa14□□□□□ -0.17
Gm3500-202ENSMUST00000178058 Cecr2E9Q2Z1 1453 aa13.99□□□□□ -0.17
Gm3500-202ENSMUST00000178058 Top2bQ64511 1612 aa13.99□□□□□ -0.17
Gm3500-202ENSMUST00000178058 Eif4g3Q80XI3 1579 aaKnown RBP13.96□□□□□ -0.17
Gm3500-202ENSMUST00000178058 Pabpn1Q8CCS6 302 aaKnown RBP13.95□□□□□ -0.18
Gm3500-202ENSMUST00000178058 Sox12Q04890 314 aa13.94□□□□□ -0.18
Gm3500-202ENSMUST00000178058 Zcchc11B2RX14 1644 aaKnown RBP13.89□□□□□ -0.19
Gm3500-202ENSMUST00000178058 Kif21aQ9QXL2 1672 aa13.87□□□□□ -0.19
Gm3500-202ENSMUST00000178058 Arhgef5E9Q7D5 1581 aa13.83□□□□□ -0.2
Gm3500-202ENSMUST00000178058 Fam71e1A1L3C1 212 aa13.81□□□□□ -0.2
Gm3500-202ENSMUST00000178058 Pelp1Q9DBD5 1123 aaKnown RBP13.77□□□□□ -0.21
Gm3500-202ENSMUST00000178058 WdpcpQ8C456 722 aa13.75□□□□□ -0.21
Gm3500-202ENSMUST00000178058 Ube2uB1AUC4 352 aa13.72□□□□□ -0.21
Gm3500-202ENSMUST00000178058 Cux2P70298 1426 aa13.71□□□□□ -0.22
Gm3500-202ENSMUST00000178058 Nlrp6Q91WS2 869 aa13.68□□□□□ -0.22
Gm3500-202ENSMUST00000178058 Cdca7Q9D0M2 382 aa13.67□□□□□ -0.22
Gm3500-202ENSMUST00000178058 Ttbk1Q6PCN3 1308 aa13.62□□□□□ -0.23
Gm3500-202ENSMUST00000178058 Plb1Q3TTY0 1478 aa13.6□□□□□ -0.23
Gm3500-202ENSMUST00000178058 C1qtnf12Q8R2Z0 308 aa13.57□□□□□ -0.24
Gm3500-202ENSMUST00000178058 Urb2E9Q7L1 1524 aaKnown RBP13.57□□□□□ -0.24
Gm3500-202ENSMUST00000178058 Adgrl3Q80TS3 1537 aa13.56□□□□□ -0.24
Gm3500-202ENSMUST00000178058 Cypt1Q8CH20 168 aa13.54□□□□□ -0.24
Gm3500-202ENSMUST00000178058 Cttnbp2B9EJA2 1648 aa13.53□□□□□ -0.24
Gm3500-202ENSMUST00000178058 Kif15Q6P9L6 1387 aa13.51□□□□□ -0.25
Gm3500-202ENSMUST00000178058 Plekhg3Q4VAC9 1341 aa13.51□□□□□ -0.25
Gm3500-202ENSMUST00000178058 Rhox8Q6VSS7 320 aa13.5□□□□□ -0.25
Gm3500-202ENSMUST00000178058 CftrP26361 1476 aa13.49□□□□□ -0.25
Gm3500-202ENSMUST00000178058 Npm1Q61937 292 aaKnown RBP13.48□□□□□ -0.25
Gm3500-202ENSMUST00000178058 Rusc2Q80U22 1514 aa13.48□□□□□ -0.25
Gm3500-202ENSMUST00000178058 PtprtQ99M80 1454 aa13.48□□□□□ -0.25
Gm3500-202ENSMUST00000178058 AcrbpQ3V140 540 aa13.45□□□□□ -0.26
Gm3500-202ENSMUST00000178058 PtprkP35822 1457 aa13.4□□□□□ -0.26
Gm3500-202ENSMUST00000178058 Synj1Q8CHC4 1574 aa13.4□□□□□ -0.26
Gm3500-202ENSMUST00000178058 Gm156Q58A37 223 aa13.39□□□□□ -0.27
Gm3500-202ENSMUST00000178058 Cep170Q6A065 1588 aa13.39□□□□□ -0.27
Gm3500-202ENSMUST00000178058 Cep164Q5DU05 1446 aa13.39□□□□□ -0.27
Gm3500-202ENSMUST00000178058 Pde4cQ3UEI1 686 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 77.4 ms