RNA–Protein interactions for RNA: ENSMUST00000177703.2

Trav12d-3-201, Transcript of T cell receptor alpha variable 12D-3 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav12d-3, Length 347 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3-201ENSMUST00000177703 Chic1Q8CBW7 227 aa21.49■■□□□ 1.03
Trav12d-3-201ENSMUST00000177703 Mapk8ip2Q9ERE9 830 aa21.17■□□□□ 0.98
Trav12d-3-201ENSMUST00000177703 Phf23Q8BSN5 401 aa19.15■□□□□ 0.66
Trav12d-3-201ENSMUST00000177703 Gab3Q8BSM5 595 aa18.4■□□□□ 0.54
Trav12d-3-201ENSMUST00000177703 Plppr3Q7TPB0 716 aa18.39■□□□□ 0.53
Trav12d-3-201ENSMUST00000177703 Gm35339A0A140LHH9 1649 aa18.23■□□□□ 0.51
Trav12d-3-201ENSMUST00000177703 NischQ80TM9 1593 aa17.67■□□□□ 0.42
Trav12d-3-201ENSMUST00000177703 Abcc9P70170 1546 aa17.64■□□□□ 0.41
Trav12d-3-201ENSMUST00000177703 Senp3Q9EP97 568 aaKnown RBP17.5■□□□□ 0.39
Trav12d-3-201ENSMUST00000177703 Abcc8B2RUS7 1588 aa17.27■□□□□ 0.35
Trav12d-3-201ENSMUST00000177703 ScribQ80U72 1612 aa17.19■□□□□ 0.34
Trav12d-3-201ENSMUST00000177703 Dnajc5bQ9CQ94 199 aa16.59■□□□□ 0.25
Trav12d-3-201ENSMUST00000177703 Kcna4Q61423 654 aa16.47■□□□□ 0.23
Trav12d-3-201ENSMUST00000177703 Kdm5dQ62240 1548 aa16.36■□□□□ 0.21
Trav12d-3-201ENSMUST00000177703 NacadQ5SWP3 1504 aa16.29■□□□□ 0.2
Trav12d-3-201ENSMUST00000177703 BicraF8VPZ9 1578 aa16.09■□□□□ 0.17
Trav12d-3-201ENSMUST00000177703 Sycp2Q9CUU3 1500 aa16.06■□□□□ 0.16
Trav12d-3-201ENSMUST00000177703 Fam163aQ8CAA5 168 aa15.89■□□□□ 0.13
Trav12d-3-201ENSMUST00000177703 Thoc2B1AZI6 1594 aaKnown RBP15.79■□□□□ 0.12
Trav12d-3-201ENSMUST00000177703 Dcaf1Q80TR8 1506 aa15.71■□□□□ 0.11
Trav12d-3-201ENSMUST00000177703 Trap1aP19473 224 aa15.6■□□□□ 0.09
Trav12d-3-201ENSMUST00000177703 Cc2d2aQ8CFW7 1633 aa15.54■□□□□ 0.08
Trav12d-3-201ENSMUST00000177703 Hoxd11P23813 323 aa15.53■□□□□ 0.08
Trav12d-3-201ENSMUST00000177703 Pds5bQ4VA53 1446 aaKnown RBP15.47■□□□□ 0.07
Trav12d-3-201ENSMUST00000177703 Rb1cc1Q9ESK9 1588 aa15.41■□□□□ 0.06
Trav12d-3-201ENSMUST00000177703 Dnajc5P60904 198 aa15.36■□□□□ 0.05
Trav12d-3-201ENSMUST00000177703 Atad2bE9Q166 1460 aaKnown RBP15.25■□□□□ 0.03
Trav12d-3-201ENSMUST00000177703 Fam135aQ6NS59 1506 aa15.23■□□□□ 0.03
Trav12d-3-201ENSMUST00000177703 Ercc6F8VPZ5 1481 aa15.19■□□□□ 0.02
Trav12d-3-201ENSMUST00000177703 Trim41Q5NCC3 630 aa15.16■□□□□ 0.02
Trav12d-3-201ENSMUST00000177703 Smarca2Q6DIC0 1577 aa15.12■□□□□ 0.01
Trav12d-3-201ENSMUST00000177703 Znf219Q6IQX8 726 aa15.07■□□□□ 0
Trav12d-3-201ENSMUST00000177703 Baz1aO88379 1555 aa15.07■□□□□ 0
Trav12d-3-201ENSMUST00000177703 Unc13aQ4KUS2 1712 aa15.03■□□□□ -0
Trav12d-3-201ENSMUST00000177703 Iqgap2Q3UQ44 1575 aa15.03■□□□□ -0
Trav12d-3-201ENSMUST00000177703 Smarca4Q3TKT4 1613 aaKnown RBP15□□□□□ -0.01
Trav12d-3-201ENSMUST00000177703 Wdr62Q3U3T8 1523 aa14.99□□□□□ -0.01
Trav12d-3-201ENSMUST00000177703 Zcchc6Q5BLK4 1491 aaKnown RBP14.98□□□□□ -0.01
Trav12d-3-201ENSMUST00000177703 Frmpd1A2AKB4 1549 aa14.97□□□□□ -0.01
Trav12d-3-201ENSMUST00000177703 Ccdc180J3QNE4 1664 aa14.93□□□□□ -0.02
Trav12d-3-201ENSMUST00000177703 Cecr2E9Q2Z1 1453 aa14.9□□□□□ -0.02
Trav12d-3-201ENSMUST00000177703 Crybg2B7ZCC2 1516 aa14.89□□□□□ -0.03
Trav12d-3-201ENSMUST00000177703 Phldb1Q6PDH0 1371 aaKnown RBP14.85□□□□□ -0.03
Trav12d-3-201ENSMUST00000177703 Mrc2Q64449 1479 aa14.82□□□□□ -0.04
Trav12d-3-201ENSMUST00000177703 Chrna2Q91X60 512 aa14.8□□□□□ -0.04
Trav12d-3-201ENSMUST00000177703 Ubl4bQ9CQ84 188 aa14.79□□□□□ -0.04
Trav12d-3-201ENSMUST00000177703 Lrriq1Q0P5X1 1673 aa14.74□□□□□ -0.05
Trav12d-3-201ENSMUST00000177703 ArsiQ32KI9 573 aa14.72□□□□□ -0.05
Trav12d-3-201ENSMUST00000177703 Rsph4aQ8BYM7 716 aa14.72□□□□□ -0.05
Trav12d-3-201ENSMUST00000177703 Dmrt2Q8BG36 561 aa14.7□□□□□ -0.06
Trav12d-3-201ENSMUST00000177703 Baz1bQ9Z277 1479 aa14.68□□□□□ -0.06
Trav12d-3-201ENSMUST00000177703 Rhox8Q6VSS7 320 aa14.64□□□□□ -0.07
Trav12d-3-201ENSMUST00000177703 Kif21aQ9QXL2 1672 aa14.54□□□□□ -0.08
Trav12d-3-201ENSMUST00000177703 Col17a1Q07563 1470 aa14.47□□□□□ -0.09
Trav12d-3-201ENSMUST00000177703 Rsf1E9PWW9 1441 aaKnown RBP14.45□□□□□ -0.1
Trav12d-3-201ENSMUST00000177703 Shroom2A2ALU4 1481 aa14.44□□□□□ -0.1
Trav12d-3-201ENSMUST00000177703 Rimbp2Q80U40 1072 aa14.43□□□□□ -0.1
Trav12d-3-201ENSMUST00000177703 Eif4g3Q80XI3 1579 aaKnown RBP14.43□□□□□ -0.1
Trav12d-3-201ENSMUST00000177703 Synj1Q8CHC4 1574 aa14.36□□□□□ -0.11
Trav12d-3-201ENSMUST00000177703 Cttnbp2B9EJA2 1648 aa14.36□□□□□ -0.11
Trav12d-3-201ENSMUST00000177703 CftrP26361 1476 aa14.31□□□□□ -0.12
Trav12d-3-201ENSMUST00000177703 Cux2P70298 1426 aa14.3□□□□□ -0.12
Trav12d-3-201ENSMUST00000177703 Top2bQ64511 1612 aa14.26□□□□□ -0.13
Trav12d-3-201ENSMUST00000177703 Akt1s1Q9D1F4 257 aa14.25□□□□□ -0.13
Trav12d-3-201ENSMUST00000177703 Pcdh10E9PXQ7 1057 aa14.24□□□□□ -0.13
Trav12d-3-201ENSMUST00000177703 Ppargc1bQ8VHJ7 1014 aa14.18□□□□□ -0.14
Trav12d-3-201ENSMUST00000177703 Urb2E9Q7L1 1524 aaKnown RBP14.17□□□□□ -0.14
Trav12d-3-201ENSMUST00000177703 Kif15Q6P9L6 1387 aa14.16□□□□□ -0.14
Trav12d-3-201ENSMUST00000177703 Pabpn1Q8CCS6 302 aaKnown RBP14.15□□□□□ -0.14
Trav12d-3-201ENSMUST00000177703 Pelp1Q9DBD5 1123 aaKnown RBP14.12□□□□□ -0.15
Trav12d-3-201ENSMUST00000177703 Plb1Q3TTY0 1478 aa14.08□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Slc4a1apE9PX68 744 aa14.08□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Zcchc11B2RX14 1644 aaKnown RBP14.06□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Ppp4r2Q0VGB7 417 aa14.05□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Slc34a2Q9DBP0 697 aa14.05□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Lamc3Q9R0B6 1581 aa14.05□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Arhgef5E9Q7D5 1581 aa14.02□□□□□ -0.16
Trav12d-3-201ENSMUST00000177703 Hs6st3Q9QYK4 470 aa14.02□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Setd1bQ8CFT2 1985 aa14□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Rusc2Q80U22 1514 aa14□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Atf5O70191 283 aa13.99□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Npm1Q61937 292 aaKnown RBP13.98□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Rtl1Q7M732 1744 aa13.98□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Crocc2F6XLV1 1638 aa13.97□□□□□ -0.17
Trav12d-3-201ENSMUST00000177703 Brd4Q9ESU6 1400 aaKnown RBP13.95□□□□□ -0.18
Trav12d-3-201ENSMUST00000177703 Dhx29Q6PGC1 1365 aaKnown RBP13.95□□□□□ -0.18
Trav12d-3-201ENSMUST00000177703 Esf1Q3V1V3 845 aaKnown RBP13.93□□□□□ -0.18
Trav12d-3-201ENSMUST00000177703 Cep164Q5DU05 1446 aa13.92□□□□□ -0.18
Trav12d-3-201ENSMUST00000177703 Adgrl3Q80TS3 1537 aa13.89□□□□□ -0.19
Trav12d-3-201ENSMUST00000177703 Ccdc136Q3TVA9 1136 aa13.87□□□□□ -0.19
Trav12d-3-201ENSMUST00000177703 Il27Q8K3I6 234 aa13.87□□□□□ -0.19
Trav12d-3-201ENSMUST00000177703 Ttbk1Q6PCN3 1308 aa13.85□□□□□ -0.19
Trav12d-3-201ENSMUST00000177703 Cep170Q6A065 1588 aa13.83□□□□□ -0.19
Trav12d-3-201ENSMUST00000177703 Ift140E9PY46 1464 aa13.79□□□□□ -0.2
Trav12d-3-201ENSMUST00000177703 PtprtQ99M80 1454 aa13.79□□□□□ -0.2
Trav12d-3-201ENSMUST00000177703 Camsap1A2AHC3 1581 aa13.78□□□□□ -0.2
Trav12d-3-201ENSMUST00000177703 LrpprcQ6PB66 1392 aaKnown RBP13.77□□□□□ -0.21
Trav12d-3-201ENSMUST00000177703 TnnQ80Z71 1560 aa13.77□□□□□ -0.21
Trav12d-3-201ENSMUST00000177703 Pprc1Q6NZN1 1644 aa13.76□□□□□ -0.21
Trav12d-3-201ENSMUST00000177703 PtprkP35822 1457 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 106.5 ms