RNA–Protein interactions for RNA: ENSMUST00000174391.7

Syncrip-210, Transcript of Heterogeneous nuclear ribonucleoprotein Q, mousemouse

TSL 1 (best) BASIC

Gene Syncrip, Length 6,257 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syncrip-210ENSMUST00000174391 Rhox8Q6VSS7 320 aa22.78■■□□□ 1.24
Syncrip-210ENSMUST00000174391 NischQ80TM9 1593 aa21.14■□□□□ 0.97
Syncrip-210ENSMUST00000174391 Esf1Q3V1V3 845 aaKnown RBP20.64■□□□□ 0.89
Syncrip-210ENSMUST00000174391 Abcc9P70170 1546 aa20.45■□□□□ 0.86
Syncrip-210ENSMUST00000174391 Ccdc136Q3TVA9 1136 aa20.35■□□□□ 0.85
Syncrip-210ENSMUST00000174391 Cngb1E1AZ71 1325 aa20.22■□□□□ 0.83
Syncrip-210ENSMUST00000174391 Trim41Q5NCC3 630 aa20.11■□□□□ 0.81
Syncrip-210ENSMUST00000174391 Zeb1Q64318 1117 aa20.07■□□□□ 0.8
Syncrip-210ENSMUST00000174391 Gm35339A0A140LHH9 1649 aa19.98■□□□□ 0.79
Syncrip-210ENSMUST00000174391 Npm2Q80W85 207 aa19.81■□□□□ 0.76
Syncrip-210ENSMUST00000174391 Rpgrip1Q9EPQ2 1331 aa19.58■□□□□ 0.72
Syncrip-210ENSMUST00000174391 Zcchc6Q5BLK4 1491 aaKnown RBP19.54■□□□□ 0.72
Syncrip-210ENSMUST00000174391 Il27Q8K3I6 234 aa19.54■□□□□ 0.72
Syncrip-210ENSMUST00000174391 Abcc8B2RUS7 1588 aa19.52■□□□□ 0.72
Syncrip-210ENSMUST00000174391 Gab3Q8BSM5 595 aa19.51■□□□□ 0.71
Syncrip-210ENSMUST00000174391 Myt1lP97500 1187 aa19.41■□□□□ 0.7
Syncrip-210ENSMUST00000174391 Ube2uB1AUC4 352 aa19.38■□□□□ 0.69
Syncrip-210ENSMUST00000174391 Npm1Q61937 292 aaKnown RBP19.15■□□□□ 0.66
Syncrip-210ENSMUST00000174391 Las1lA2BE28 776 aaKnown RBP19■□□□□ 0.63
Syncrip-210ENSMUST00000174391 Ubl4bQ9CQ84 188 aa18.89■□□□□ 0.61
Syncrip-210ENSMUST00000174391 Ehmt2Q9Z148 1263 aaKnown RBP18.85■□□□□ 0.61
Syncrip-210ENSMUST00000174391 NacadQ5SWP3 1504 aa18.85■□□□□ 0.61
Syncrip-210ENSMUST00000174391 Ttbk1Q6PCN3 1308 aa18.68■□□□□ 0.58
Syncrip-210ENSMUST00000174391 Pelp1Q9DBD5 1123 aaKnown RBP18.64■□□□□ 0.57
Syncrip-210ENSMUST00000174391 Ifnlr1Q8CGK5 535 aa18.59■□□□□ 0.57
Syncrip-210ENSMUST00000174391 Brd4Q9ESU6 1400 aaKnown RBP18.56■□□□□ 0.56
Syncrip-210ENSMUST00000174391 Rb1cc1Q9ESK9 1588 aa18.55■□□□□ 0.56
Syncrip-210ENSMUST00000174391 Ercc6F8VPZ5 1481 aa18.54■□□□□ 0.56
Syncrip-210ENSMUST00000174391 Ap3b1Q9Z1T1 1105 aa18.52■□□□□ 0.56
Syncrip-210ENSMUST00000174391 UbtfP25976 765 aaKnown RBP18.42■□□□□ 0.54
Syncrip-210ENSMUST00000174391 HrcG5E8J6 738 aa18.41■□□□□ 0.54
Syncrip-210ENSMUST00000174391 Gm13697A2AK42 830 aa18.35■□□□□ 0.53
Syncrip-210ENSMUST00000174391 Ccdc180J3QNE4 1664 aa18.32■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Plppr3Q7TPB0 716 aa18.32■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Pds5bQ4VA53 1446 aaKnown RBP18.3■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Rtl1Q7M732 1744 aa18.29■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Fkbp15Q6P9Q6 1216 aaKnown RBP18.29■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Wdr66E9Q743 1299 aa18.28■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Kdm5dQ62240 1548 aa18.28■□□□□ 0.52
Syncrip-210ENSMUST00000174391 Fam50aQ9WV03 339 aaKnown RBP18.25■□□□□ 0.51
Syncrip-210ENSMUST00000174391 Os9Q8K2C7 672 aa18.19■□□□□ 0.5
Syncrip-210ENSMUST00000174391 Rsf1E9PWW9 1441 aaKnown RBP18.18■□□□□ 0.5
Syncrip-210ENSMUST00000174391 NclP09405 707 aaKnown RBP18.17■□□□□ 0.5
Syncrip-210ENSMUST00000174391 Kif15Q6P9L6 1387 aa18.15■□□□□ 0.5
Syncrip-210ENSMUST00000174391 Baz1aO88379 1555 aa18.11■□□□□ 0.49
Syncrip-210ENSMUST00000174391 Lmod2Q3UHZ5 550 aa18.1■□□□□ 0.49
Syncrip-210ENSMUST00000174391 Hnrnpul2Q00PI9 745 aaKnown RBP18.07■□□□□ 0.48
Syncrip-210ENSMUST00000174391 Zbtb7cQ8VCZ7 619 aa18.07■□□□□ 0.48
Syncrip-210ENSMUST00000174391 CenpbP27790 599 aa18.03■□□□□ 0.48
Syncrip-210ENSMUST00000174391 Cep164Q5DU05 1446 aa18■□□□□ 0.47
Syncrip-210ENSMUST00000174391 Safb2Q80YR5 991 aaKnown RBP17.99■□□□□ 0.47
Syncrip-210ENSMUST00000174391 Dcaf1Q80TR8 1506 aa17.97■□□□□ 0.47
Syncrip-210ENSMUST00000174391 Ccdc18Q640L5 1455 aa17.97■□□□□ 0.47
Syncrip-210ENSMUST00000174391 Sycp2Q9CUU3 1500 aa17.96■□□□□ 0.47
Syncrip-210ENSMUST00000174391 Gm13695A2AK44 830 aa17.93■□□□□ 0.46
Syncrip-210ENSMUST00000174391 Neurod1Q60867 357 aa17.89■□□□□ 0.45
Syncrip-210ENSMUST00000174391 Acin1Q9JIX8 1338 aaKnown RBP17.86■□□□□ 0.45
Syncrip-210ENSMUST00000174391 Slc24a1Q91WD8 1130 aa17.84■□□□□ 0.45
Syncrip-210ENSMUST00000174391 Amer1Q7TS75 1132 aa17.84■□□□□ 0.45
Syncrip-210ENSMUST00000174391 Atp1b4Q99ME6 356 aa17.84■□□□□ 0.45
Syncrip-210ENSMUST00000174391 Erich6D3Z6S9 713 aa17.8■□□□□ 0.44
Syncrip-210ENSMUST00000174391 NefmP08553 848 aa17.8■□□□□ 0.44
Syncrip-210ENSMUST00000174391 Phldb1Q6PDH0 1371 aaKnown RBP17.77■□□□□ 0.44
Syncrip-210ENSMUST00000174391 Hdac5Q9Z2V6 1113 aa17.77■□□□□ 0.44
Syncrip-210ENSMUST00000174391 Arhgap27A2AB59 869 aa17.75■□□□□ 0.43
Syncrip-210ENSMUST00000174391 Plekhg3Q4VAC9 1341 aa17.74■□□□□ 0.43
Syncrip-210ENSMUST00000174391 Cdk11bP24788 784 aaKnown RBP17.73■□□□□ 0.43
Syncrip-210ENSMUST00000174391 Atad2bE9Q166 1460 aaKnown RBP17.71■□□□□ 0.43
Syncrip-210ENSMUST00000174391 Anp32bQ9EST5 272 aaKnown RBP17.71■□□□□ 0.42
Syncrip-210ENSMUST00000174391 Ppp1r18Q8BQ30 594 aa17.7■□□□□ 0.42
Syncrip-210ENSMUST00000174391 Chic1Q8CBW7 227 aa17.7■□□□□ 0.42
Syncrip-210ENSMUST00000174391 Myt1Q8CFC2 1127 aa17.7■□□□□ 0.42
Syncrip-210ENSMUST00000174391 Clip1Q922J3 1391 aa17.64■□□□□ 0.41
Syncrip-210ENSMUST00000174391 Golga3P55937 1487 aa17.63■□□□□ 0.41
Syncrip-210ENSMUST00000174391 ScribQ80U72 1612 aa17.61■□□□□ 0.41
Syncrip-210ENSMUST00000174391 MyclP10166 368 aa17.56■□□□□ 0.4
Syncrip-210ENSMUST00000174391 Cux2P70298 1426 aa17.56■□□□□ 0.4
Syncrip-210ENSMUST00000174391 Pabpn1Q8CCS6 302 aaKnown RBP17.51■□□□□ 0.39
Syncrip-210ENSMUST00000174391 Crybg2B7ZCC2 1516 aa17.5■□□□□ 0.39
Syncrip-210ENSMUST00000174391 Clstn2Q9ER65 966 aa17.5■□□□□ 0.39
Syncrip-210ENSMUST00000174391 AknaQ80VW7 1404 aa17.5■□□□□ 0.39
Syncrip-210ENSMUST00000174391 Stra8P70278 393 aa17.49■□□□□ 0.39
Syncrip-210ENSMUST00000174391 Setd5Q5XJV7 1441 aa17.41■□□□□ 0.38
Syncrip-210ENSMUST00000174391 Pcgf6Q99NA9 353 aa17.4■□□□□ 0.38
Syncrip-210ENSMUST00000174391 P3h3Q8CG70 732 aa17.38■□□□□ 0.37
Syncrip-210ENSMUST00000174391 BlmO88700 1416 aa17.38■□□□□ 0.37
Syncrip-210ENSMUST00000174391 Arid3cA6PWV5 409 aa17.37■□□□□ 0.37
Syncrip-210ENSMUST00000174391 Smarca4Q3TKT4 1613 aaKnown RBP17.37■□□□□ 0.37
Syncrip-210ENSMUST00000174391 MlecQ6ZQI3 291 aaKnown RBP17.35■□□□□ 0.37
Syncrip-210ENSMUST00000174391 NrdcQ8BHG1 1161 aa17.35■□□□□ 0.37
Syncrip-210ENSMUST00000174391 Chic2Q9D9G3 165 aa17.33■□□□□ 0.36
Syncrip-210ENSMUST00000174391 Zbtb4Q5F293 982 aa17.3■□□□□ 0.36
Syncrip-210ENSMUST00000174391 CftrP26361 1476 aa17.28■□□□□ 0.36
Syncrip-210ENSMUST00000174391 Ccer2J3QPU5 274 aa17.25■□□□□ 0.35
Syncrip-210ENSMUST00000174391 Cecr2E9Q2Z1 1453 aa17.25■□□□□ 0.35
Syncrip-210ENSMUST00000174391 TonslQ6NZL6 1363 aa17.24■□□□□ 0.35
Syncrip-210ENSMUST00000174391 Fmn1Q05860 1466 aa17.23■□□□□ 0.35
Syncrip-210ENSMUST00000174391 Iqgap2Q3UQ44 1575 aa17.2■□□□□ 0.34
Syncrip-210ENSMUST00000174391 4930567H17RikQ3V0K5 233 aa17.2■□□□□ 0.34
Syncrip-210ENSMUST00000174391 LrpprcQ6PB66 1392 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms