RNA–Protein interactions for RNA: ENSMUST00000160502.1

Spdye4a-202, Transcript of Speedy protein E4A, mousemouse

TSL 1 (best) BASIC

Gene Spdye4a, Length 1,245 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spdye4a-202ENSMUST00000160502 Mapk8ip2Q9ERE9 830 aa29.03■■■□□ 2.24
Spdye4a-202ENSMUST00000160502 Chic1Q8CBW7 227 aa28.77■■■□□ 2.2
Spdye4a-202ENSMUST00000160502 Gm35339A0A140LHH9 1649 aa25.91■■□□□ 1.74
Spdye4a-202ENSMUST00000160502 Phf23Q8BSN5 401 aa25.78■■□□□ 1.72
Spdye4a-202ENSMUST00000160502 NischQ80TM9 1593 aa25.65■■□□□ 1.7
Spdye4a-202ENSMUST00000160502 Abcc8B2RUS7 1588 aa24.83■■□□□ 1.57
Spdye4a-202ENSMUST00000160502 Abcc9P70170 1546 aa24.72■■□□□ 1.55
Spdye4a-202ENSMUST00000160502 Gab3Q8BSM5 595 aa24.45■■□□□ 1.5
Spdye4a-202ENSMUST00000160502 Plppr3Q7TPB0 716 aa24.2■■□□□ 1.46
Spdye4a-202ENSMUST00000160502 ScribQ80U72 1612 aa23.99■■□□□ 1.43
Spdye4a-202ENSMUST00000160502 Senp3Q9EP97 568 aaKnown RBP23.31■■□□□ 1.32
Spdye4a-202ENSMUST00000160502 NacadQ5SWP3 1504 aa23.29■■□□□ 1.32
Spdye4a-202ENSMUST00000160502 Kdm5dQ62240 1548 aa23.2■■□□□ 1.3
Spdye4a-202ENSMUST00000160502 Sycp2Q9CUU3 1500 aa22.83■■□□□ 1.25
Spdye4a-202ENSMUST00000160502 Dcaf1Q80TR8 1506 aa22.73■■□□□ 1.23
Spdye4a-202ENSMUST00000160502 BicraF8VPZ9 1578 aa22.53■■□□□ 1.2
Spdye4a-202ENSMUST00000160502 Dnajc5bQ9CQ94 199 aa22.37■■□□□ 1.17
Spdye4a-202ENSMUST00000160502 Rb1cc1Q9ESK9 1588 aa22.3■■□□□ 1.16
Spdye4a-202ENSMUST00000160502 Rhox8Q6VSS7 320 aa22.21■■□□□ 1.15
Spdye4a-202ENSMUST00000160502 Pds5bQ4VA53 1446 aaKnown RBP22.01■■□□□ 1.11
Spdye4a-202ENSMUST00000160502 Baz1aO88379 1555 aa21.98■■□□□ 1.11
Spdye4a-202ENSMUST00000160502 Fam163aQ8CAA5 168 aa21.95■■□□□ 1.1
Spdye4a-202ENSMUST00000160502 Crybg2B7ZCC2 1516 aa21.95■■□□□ 1.1
Spdye4a-202ENSMUST00000160502 Ccdc180J3QNE4 1664 aa21.84■■□□□ 1.09
Spdye4a-202ENSMUST00000160502 Zcchc6Q5BLK4 1491 aaKnown RBP21.79■■□□□ 1.08
Spdye4a-202ENSMUST00000160502 Thoc2B1AZI6 1594 aaKnown RBP21.78■■□□□ 1.08
Spdye4a-202ENSMUST00000160502 Atad2bE9Q166 1460 aaKnown RBP21.75■■□□□ 1.07
Spdye4a-202ENSMUST00000160502 Ercc6F8VPZ5 1481 aa21.52■■□□□ 1.04
Spdye4a-202ENSMUST00000160502 Cc2d2aQ8CFW7 1633 aa21.5■■□□□ 1.03
Spdye4a-202ENSMUST00000160502 Smarca2Q6DIC0 1577 aa21.46■■□□□ 1.03
Spdye4a-202ENSMUST00000160502 Kcna4Q61423 654 aa21.45■■□□□ 1.02
Spdye4a-202ENSMUST00000160502 Smarca4Q3TKT4 1613 aaKnown RBP21.44■■□□□ 1.02
Spdye4a-202ENSMUST00000160502 Cecr2E9Q2Z1 1453 aa21.4■■□□□ 1.02
Spdye4a-202ENSMUST00000160502 Iqgap2Q3UQ44 1575 aa21.36■■□□□ 1.01
Spdye4a-202ENSMUST00000160502 Fam135aQ6NS59 1506 aa21.26■□□□□ 0.99
Spdye4a-202ENSMUST00000160502 Frmpd1A2AKB4 1549 aa21.22■□□□□ 0.99
Spdye4a-202ENSMUST00000160502 Phldb1Q6PDH0 1371 aaKnown RBP21.21■□□□□ 0.99
Spdye4a-202ENSMUST00000160502 Wdr62Q3U3T8 1523 aa21.19■□□□□ 0.98
Spdye4a-202ENSMUST00000160502 Ubl4bQ9CQ84 188 aa21.15■□□□□ 0.98
Spdye4a-202ENSMUST00000160502 Baz1bQ9Z277 1479 aa21■□□□□ 0.95
Spdye4a-202ENSMUST00000160502 CftrP26361 1476 aa20.85■□□□□ 0.93
Spdye4a-202ENSMUST00000160502 Mrc2Q64449 1479 aa20.84■□□□□ 0.93
Spdye4a-202ENSMUST00000160502 Ccdc136Q3TVA9 1136 aa20.84■□□□□ 0.93
Spdye4a-202ENSMUST00000160502 Unc13aQ4KUS2 1712 aa20.81■□□□□ 0.92
Spdye4a-202ENSMUST00000160502 Hoxd11P23813 323 aa20.79■□□□□ 0.92
Spdye4a-202ENSMUST00000160502 Brd4Q9ESU6 1400 aaKnown RBP20.78■□□□□ 0.92
Spdye4a-202ENSMUST00000160502 Synj1Q8CHC4 1574 aa20.77■□□□□ 0.92
Spdye4a-202ENSMUST00000160502 Cttnbp2B9EJA2 1648 aa20.76■□□□□ 0.91
Spdye4a-202ENSMUST00000160502 Rtl1Q7M732 1744 aa20.73■□□□□ 0.91
Spdye4a-202ENSMUST00000160502 Esf1Q3V1V3 845 aaKnown RBP20.7■□□□□ 0.9
Spdye4a-202ENSMUST00000160502 Trap1aP19473 224 aa20.64■□□□□ 0.89
Spdye4a-202ENSMUST00000160502 Trim41Q5NCC3 630 aa20.54■□□□□ 0.88
Spdye4a-202ENSMUST00000160502 Cux2P70298 1426 aa20.49■□□□□ 0.87
Spdye4a-202ENSMUST00000160502 Kif15Q6P9L6 1387 aa20.48■□□□□ 0.87
Spdye4a-202ENSMUST00000160502 Rsf1E9PWW9 1441 aaKnown RBP20.48■□□□□ 0.87
Spdye4a-202ENSMUST00000160502 Dnajc5P60904 198 aa20.42■□□□□ 0.86
Spdye4a-202ENSMUST00000160502 Npm1Q61937 292 aaKnown RBP20.39■□□□□ 0.85
Spdye4a-202ENSMUST00000160502 Lrriq1Q0P5X1 1673 aa20.35■□□□□ 0.85
Spdye4a-202ENSMUST00000160502 Kif21aQ9QXL2 1672 aa20.26■□□□□ 0.83
Spdye4a-202ENSMUST00000160502 Lamc3Q9R0B6 1581 aa20.25■□□□□ 0.83
Spdye4a-202ENSMUST00000160502 Znf219Q6IQX8 726 aa20.19■□□□□ 0.82
Spdye4a-202ENSMUST00000160502 Cep164Q5DU05 1446 aa20.19■□□□□ 0.82
Spdye4a-202ENSMUST00000160502 Il27Q8K3I6 234 aa20.17■□□□□ 0.82
Spdye4a-202ENSMUST00000160502 ArsiQ32KI9 573 aa20.1■□□□□ 0.81
Spdye4a-202ENSMUST00000160502 Cngb1E1AZ71 1325 aa20.06■□□□□ 0.8
Spdye4a-202ENSMUST00000160502 Dhx29Q6PGC1 1365 aaKnown RBP20.04■□□□□ 0.8
Spdye4a-202ENSMUST00000160502 Ccdc18Q640L5 1455 aa20.04■□□□□ 0.8
Spdye4a-202ENSMUST00000160502 Eif4g3Q80XI3 1579 aaKnown RBP20.04■□□□□ 0.8
Spdye4a-202ENSMUST00000160502 Urb2E9Q7L1 1524 aaKnown RBP20.02■□□□□ 0.79
Spdye4a-202ENSMUST00000160502 Plb1Q3TTY0 1478 aa20■□□□□ 0.79
Spdye4a-202ENSMUST00000160502 LrpprcQ6PB66 1392 aaKnown RBP19.98■□□□□ 0.79
Spdye4a-202ENSMUST00000160502 Golga3P55937 1487 aa19.97■□□□□ 0.79
Spdye4a-202ENSMUST00000160502 Shroom2A2ALU4 1481 aa19.93■□□□□ 0.78
Spdye4a-202ENSMUST00000160502 TnnQ80Z71 1560 aa19.91■□□□□ 0.78
Spdye4a-202ENSMUST00000160502 Pabpn1Q8CCS6 302 aaKnown RBP19.89■□□□□ 0.77
Spdye4a-202ENSMUST00000160502 Top2bQ64511 1612 aa19.87■□□□□ 0.77
Spdye4a-202ENSMUST00000160502 Crocc2F6XLV1 1638 aa19.86■□□□□ 0.77
Spdye4a-202ENSMUST00000160502 Camsap1A2AHC3 1581 aa19.86■□□□□ 0.77
Spdye4a-202ENSMUST00000160502 PogzQ8BZH4 1409 aaKnown RBP19.81■□□□□ 0.76
Spdye4a-202ENSMUST00000160502 Pelp1Q9DBD5 1123 aaKnown RBP19.78■□□□□ 0.76
Spdye4a-202ENSMUST00000160502 Ift140E9PY46 1464 aa19.78■□□□□ 0.76
Spdye4a-202ENSMUST00000160502 Fmn1Q05860 1466 aa19.76■□□□□ 0.75
Spdye4a-202ENSMUST00000160502 Col17a1Q07563 1470 aa19.73■□□□□ 0.75
Spdye4a-202ENSMUST00000160502 Duox2A2AQ99 1517 aa19.72■□□□□ 0.75
Spdye4a-202ENSMUST00000160502 Rusc2Q80U22 1514 aa19.68■□□□□ 0.74
Spdye4a-202ENSMUST00000160502 Chrna2Q91X60 512 aa19.66■□□□□ 0.74
Spdye4a-202ENSMUST00000160502 Disp1Q3TDN0 1521 aa19.63■□□□□ 0.73
Spdye4a-202ENSMUST00000160502 Grin2bQ01097 1482 aa19.62■□□□□ 0.73
Spdye4a-202ENSMUST00000160502 Rsph4aQ8BYM7 716 aa19.57■□□□□ 0.72
Spdye4a-202ENSMUST00000160502 Efcab5A0JP43 1406 aa19.55■□□□□ 0.72
Spdye4a-202ENSMUST00000160502 Cc2d2bA0A286YDU8 1405 aa19.53■□□□□ 0.72
Spdye4a-202ENSMUST00000160502 Nup160Q9Z0W3 1402 aaKnown RBP19.51■□□□□ 0.71
Spdye4a-202ENSMUST00000160502 Samd9lQ69Z37 1561 aa19.48■□□□□ 0.71
Spdye4a-202ENSMUST00000160502 Rad54l2Q99NG0 1466 aa19.47■□□□□ 0.71
Spdye4a-202ENSMUST00000160502 Zcchc11B2RX14 1644 aaKnown RBP19.43■□□□□ 0.7
Spdye4a-202ENSMUST00000160502 Pbrm1Q8BSQ9 1634 aaKnown RBP19.43■□□□□ 0.7
Spdye4a-202ENSMUST00000160502 Setd1bQ8CFT2 1985 aa19.42■□□□□ 0.7
Spdye4a-202ENSMUST00000160502 Ccdc88bQ4QRL3 1481 aa19.41■□□□□ 0.7
Spdye4a-202ENSMUST00000160502 Fgd6Q69ZL1 1399 aa19.39■□□□□ 0.69
Spdye4a-202ENSMUST00000160502 Grin2aP35436 1464 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms