RNA–Protein interactions for RNA: ENSMUST00000139582.8

Usp35-201, Transcript of Ubiquitin-specific peptidase 35, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp35, Length 4,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35-201ENSMUST00000139582 Rhox8Q6VSS7 320 aa26.88■■□□□ 1.89
Usp35-201ENSMUST00000139582 NischQ80TM9 1593 aa25.14■■□□□ 1.62
Usp35-201ENSMUST00000139582 Ehmt2Q9Z148 1263 aaKnown RBP24.95■■□□□ 1.59
Usp35-201ENSMUST00000139582 Ccdc136Q3TVA9 1136 aa24.5■■□□□ 1.51
Usp35-201ENSMUST00000139582 Rpgrip1Q9EPQ2 1331 aa24.46■■□□□ 1.51
Usp35-201ENSMUST00000139582 Abcc9P70170 1546 aa23.69■■□□□ 1.38
Usp35-201ENSMUST00000139582 Cngb1E1AZ71 1325 aa23.68■■□□□ 1.38
Usp35-201ENSMUST00000139582 Gab3Q8BSM5 595 aa23.62■■□□□ 1.37
Usp35-201ENSMUST00000139582 Zeb1Q64318 1117 aa23.57■■□□□ 1.36
Usp35-201ENSMUST00000139582 Trim41Q5NCC3 630 aa23.55■■□□□ 1.36
Usp35-201ENSMUST00000139582 Esf1Q3V1V3 845 aaKnown RBP23.51■■□□□ 1.35
Usp35-201ENSMUST00000139582 Acin1Q9JIX8 1338 aaKnown RBP23.5■■□□□ 1.35
Usp35-201ENSMUST00000139582 Abcc8B2RUS7 1588 aa23.31■■□□□ 1.32
Usp35-201ENSMUST00000139582 Wdr66E9Q743 1299 aa23.3■■□□□ 1.32
Usp35-201ENSMUST00000139582 Gm35339A0A140LHH9 1649 aa23.11■■□□□ 1.29
Usp35-201ENSMUST00000139582 Pcgf6Q99NA9 353 aa23.05■■□□□ 1.28
Usp35-201ENSMUST00000139582 Las1lA2BE28 776 aaKnown RBP23■■□□□ 1.27
Usp35-201ENSMUST00000139582 Myt1lP97500 1187 aa22.96■■□□□ 1.27
Usp35-201ENSMUST00000139582 Ccdc180J3QNE4 1664 aa22.93■■□□□ 1.26
Usp35-201ENSMUST00000139582 HrcG5E8J6 738 aa22.88■■□□□ 1.25
Usp35-201ENSMUST00000139582 Zcchc6Q5BLK4 1491 aaKnown RBP22.86■■□□□ 1.25
Usp35-201ENSMUST00000139582 Npm2Q80W85 207 aa22.79■■□□□ 1.24
Usp35-201ENSMUST00000139582 UbtfP25976 765 aaKnown RBP22.77■■□□□ 1.23
Usp35-201ENSMUST00000139582 Supt5hO55201 1082 aaKnown RBP22.69■■□□□ 1.22
Usp35-201ENSMUST00000139582 NefmP08553 848 aa22.58■■□□□ 1.21
Usp35-201ENSMUST00000139582 Ppargc1bQ8VHJ7 1014 aa22.56■■□□□ 1.2
Usp35-201ENSMUST00000139582 Rtl1Q7M732 1744 aa22.51■■□□□ 1.19
Usp35-201ENSMUST00000139582 Il27Q8K3I6 234 aa22.51■■□□□ 1.19
Usp35-201ENSMUST00000139582 Ube2uB1AUC4 352 aa22.45■■□□□ 1.19
Usp35-201ENSMUST00000139582 Mier1Q5UAK0 511 aa22.19■■□□□ 1.14
Usp35-201ENSMUST00000139582 CenpbP27790 599 aa22.18■■□□□ 1.14
Usp35-201ENSMUST00000139582 Cdk11bP24788 784 aaKnown RBP22.18■■□□□ 1.14
Usp35-201ENSMUST00000139582 Ap3b1Q9Z1T1 1105 aa22.13■■□□□ 1.13
Usp35-201ENSMUST00000139582 Chic1Q8CBW7 227 aa22.13■■□□□ 1.13
Usp35-201ENSMUST00000139582 Slc24a1Q91WD8 1130 aa22.08■■□□□ 1.12
Usp35-201ENSMUST00000139582 Nop58Q6DFW4 536 aaKnown RBP22.07■■□□□ 1.12
Usp35-201ENSMUST00000139582 Rb1cc1Q9ESK9 1588 aa22.05■■□□□ 1.12
Usp35-201ENSMUST00000139582 Neurod1Q60867 357 aa22.04■■□□□ 1.12
Usp35-201ENSMUST00000139582 Dcaf1Q80TR8 1506 aa21.94■■□□□ 1.1
Usp35-201ENSMUST00000139582 Sall2Q9QX96 1004 aa21.87■■□□□ 1.09
Usp35-201ENSMUST00000139582 Fam50aQ9WV03 339 aaKnown RBP21.78■■□□□ 1.08
Usp35-201ENSMUST00000139582 Plekhg3Q4VAC9 1341 aa21.76■■□□□ 1.07
Usp35-201ENSMUST00000139582 Pelp1Q9DBD5 1123 aaKnown RBP21.76■■□□□ 1.07
Usp35-201ENSMUST00000139582 TonslQ6NZL6 1363 aa21.74■■□□□ 1.07
Usp35-201ENSMUST00000139582 Gm38655A0A286YDK6 273 aa21.74■■□□□ 1.07
Usp35-201ENSMUST00000139582 NclP09405 707 aaKnown RBP21.66■■□□□ 1.06
Usp35-201ENSMUST00000139582 Csrnp3P59055 597 aa21.63■■□□□ 1.05
Usp35-201ENSMUST00000139582 Mapk8ip2Q9ERE9 830 aa21.62■■□□□ 1.05
Usp35-201ENSMUST00000139582 NacadQ5SWP3 1504 aa21.61■■□□□ 1.05
Usp35-201ENSMUST00000139582 Lmod2Q3UHZ5 550 aa21.59■■□□□ 1.05
Usp35-201ENSMUST00000139582 Kdm5dQ62240 1548 aa21.58■■□□□ 1.05
Usp35-201ENSMUST00000139582 Stra8P70278 393 aa21.58■■□□□ 1.05
Usp35-201ENSMUST00000139582 Eid3Q3V124 375 aa21.58■■□□□ 1.04
Usp35-201ENSMUST00000139582 Brd4Q9ESU6 1400 aaKnown RBP21.57■■□□□ 1.04
Usp35-201ENSMUST00000139582 Cep164Q5DU05 1446 aa21.55■■□□□ 1.04
Usp35-201ENSMUST00000139582 ClspnQ80YR7 1315 aa21.52■■□□□ 1.03
Usp35-201ENSMUST00000139582 Baz1aO88379 1555 aa21.51■■□□□ 1.03
Usp35-201ENSMUST00000139582 Eif5bQ05D44 1216 aaKnown RBP21.48■■□□□ 1.03
Usp35-201ENSMUST00000139582 Ttbk1Q6PCN3 1308 aa21.44■■□□□ 1.02
Usp35-201ENSMUST00000139582 Npm1Q61937 292 aaKnown RBP21.4■■□□□ 1.02
Usp35-201ENSMUST00000139582 Anks4bQ8K3X6 423 aa21.4■■□□□ 1.02
Usp35-201ENSMUST00000139582 Tnnt3Q9QZ47 272 aa21.38■■□□□ 1.01
Usp35-201ENSMUST00000139582 Aebp2Q9Z248 504 aaKnown RBP21.33■■□□□ 1.01
Usp35-201ENSMUST00000139582 Rsf1E9PWW9 1441 aaKnown RBP21.29■■□□□ 1
Usp35-201ENSMUST00000139582 Amer1Q7TS75 1132 aa21.26■□□□□ 0.99
Usp35-201ENSMUST00000139582 NrdcQ8BHG1 1161 aa21.24■□□□□ 0.99
Usp35-201ENSMUST00000139582 ScribQ80U72 1612 aa21.22■□□□□ 0.99
Usp35-201ENSMUST00000139582 Clip1Q922J3 1391 aa21.21■□□□□ 0.99
Usp35-201ENSMUST00000139582 1700123L14RikQ3V2K7 440 aa21.2■□□□□ 0.98
Usp35-201ENSMUST00000139582 Myt1Q8CFC2 1127 aa21.19■□□□□ 0.98
Usp35-201ENSMUST00000139582 Zbtb7cQ8VCZ7 619 aa21.19■□□□□ 0.98
Usp35-201ENSMUST00000139582 Ubl4bQ9CQ84 188 aa21.13■□□□□ 0.97
Usp35-201ENSMUST00000139582 Golga3P55937 1487 aa21.11■□□□□ 0.97
Usp35-201ENSMUST00000139582 Ccdc88bQ4QRL3 1481 aa21.1■□□□□ 0.97
Usp35-201ENSMUST00000139582 Aplp2Q06335 707 aa21.03■□□□□ 0.96
Usp35-201ENSMUST00000139582 Cecr2E9Q2Z1 1453 aa21.01■□□□□ 0.95
Usp35-201ENSMUST00000139582 Fkbp15Q6P9Q6 1216 aaKnown RBP21■□□□□ 0.95
Usp35-201ENSMUST00000139582 Ifnlr1Q8CGK5 535 aa20.98■□□□□ 0.95
Usp35-201ENSMUST00000139582 Zbtb4Q5F293 982 aa20.92■□□□□ 0.94
Usp35-201ENSMUST00000139582 Anp32aO35381 247 aa20.9■□□□□ 0.94
Usp35-201ENSMUST00000139582 Chic2Q9D9G3 165 aa20.88■□□□□ 0.93
Usp35-201ENSMUST00000139582 Sycp2Q9CUU3 1500 aa20.87■□□□□ 0.93
Usp35-201ENSMUST00000139582 Kif15Q6P9L6 1387 aa20.87■□□□□ 0.93
Usp35-201ENSMUST00000139582 4933416C03RikQ3V063 378 aa20.87■□□□□ 0.93
Usp35-201ENSMUST00000139582 NeflP08551 543 aa20.79■□□□□ 0.92
Usp35-201ENSMUST00000139582 BlmO88700 1416 aa20.79■□□□□ 0.92
Usp35-201ENSMUST00000139582 Anp32bQ9EST5 272 aaKnown RBP20.78■□□□□ 0.92
Usp35-201ENSMUST00000139582 DiexfQ8BTT6 772 aaKnown RBP20.78■□□□□ 0.92
Usp35-201ENSMUST00000139582 Setd5Q5XJV7 1441 aa20.77■□□□□ 0.91
Usp35-201ENSMUST00000139582 Hnrnpul2Q00PI9 745 aaKnown RBP20.76■□□□□ 0.91
Usp35-201ENSMUST00000139582 SafbD3YXK2 937 aaKnown RBP20.72■□□□□ 0.91
Usp35-201ENSMUST00000139582 Calr4Q3TQS0 420 aa20.72■□□□□ 0.91
Usp35-201ENSMUST00000139582 Os9Q8K2C7 672 aa20.7■□□□□ 0.9
Usp35-201ENSMUST00000139582 Fam71e1A1L3C1 212 aa20.69■□□□□ 0.9
Usp35-201ENSMUST00000139582 Ppp4r2Q0VGB7 417 aa20.67■□□□□ 0.9
Usp35-201ENSMUST00000139582 Smarca2Q6DIC0 1577 aa20.65■□□□□ 0.9
Usp35-201ENSMUST00000139582 CftrP26361 1476 aa20.64■□□□□ 0.89
Usp35-201ENSMUST00000139582 Mrs2Q5NCE8 434 aa20.61■□□□□ 0.89
Usp35-201ENSMUST00000139582 Synj1Q8CHC4 1574 aa20.58■□□□□ 0.88
Usp35-201ENSMUST00000139582 Rtl5Q5DTT4 599 aa20.57■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 147.7 ms