RNA–Protein interactions for RNA: ENSMUST00000129241.2

Sptan1-208, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 5 BASIC

Gene Sptan1, Length 7,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-208ENSMUST00000129241 Rhox8Q6VSS7 320 aa16.35■□□□□ 0.21
Sptan1-208ENSMUST00000129241 NischQ80TM9 1593 aa15.49■□□□□ 0.07
Sptan1-208ENSMUST00000129241 Rpgrip1Q9EPQ2 1331 aa14.97□□□□□ -0.01
Sptan1-208ENSMUST00000129241 Ehmt2Q9Z148 1263 aaKnown RBP14.8□□□□□ -0.04
Sptan1-208ENSMUST00000129241 Abcc9P70170 1546 aa14.67□□□□□ -0.06
Sptan1-208ENSMUST00000129241 Gm35339A0A140LHH9 1649 aa14.59□□□□□ -0.07
Sptan1-208ENSMUST00000129241 Ccdc136Q3TVA9 1136 aa14.56□□□□□ -0.08
Sptan1-208ENSMUST00000129241 Cngb1E1AZ71 1325 aa14.51□□□□□ -0.09
Sptan1-208ENSMUST00000129241 Esf1Q3V1V3 845 aaKnown RBP14.48□□□□□ -0.09
Sptan1-208ENSMUST00000129241 Las1lA2BE28 776 aaKnown RBP14.4□□□□□ -0.1
Sptan1-208ENSMUST00000129241 Wdr66E9Q743 1299 aa14.39□□□□□ -0.11
Sptan1-208ENSMUST00000129241 Abcc8B2RUS7 1588 aa14.36□□□□□ -0.11
Sptan1-208ENSMUST00000129241 Gab3Q8BSM5 595 aa14.26□□□□□ -0.13
Sptan1-208ENSMUST00000129241 Zeb1Q64318 1117 aa14.25□□□□□ -0.13
Sptan1-208ENSMUST00000129241 Ube2uB1AUC4 352 aa14.25□□□□□ -0.13
Sptan1-208ENSMUST00000129241 Trim41Q5NCC3 630 aa14.22□□□□□ -0.13
Sptan1-208ENSMUST00000129241 Npm2Q80W85 207 aa14.18□□□□□ -0.14
Sptan1-208ENSMUST00000129241 Rtl1Q7M732 1744 aa14.13□□□□□ -0.15
Sptan1-208ENSMUST00000129241 Pelp1Q9DBD5 1123 aaKnown RBP14.09□□□□□ -0.15
Sptan1-208ENSMUST00000129241 Ccdc180J3QNE4 1664 aa14.06□□□□□ -0.16
Sptan1-208ENSMUST00000129241 Myt1lP97500 1187 aa14.06□□□□□ -0.16
Sptan1-208ENSMUST00000129241 Zcchc6Q5BLK4 1491 aaKnown RBP13.91□□□□□ -0.18
Sptan1-208ENSMUST00000129241 Acin1Q9JIX8 1338 aaKnown RBP13.87□□□□□ -0.19
Sptan1-208ENSMUST00000129241 UbtfP25976 765 aaKnown RBP13.8□□□□□ -0.2
Sptan1-208ENSMUST00000129241 NefmP08553 848 aa13.75□□□□□ -0.21
Sptan1-208ENSMUST00000129241 Rb1cc1Q9ESK9 1588 aa13.69□□□□□ -0.22
Sptan1-208ENSMUST00000129241 NacadQ5SWP3 1504 aa13.67□□□□□ -0.22
Sptan1-208ENSMUST00000129241 CenpbP27790 599 aa13.66□□□□□ -0.22
Sptan1-208ENSMUST00000129241 Stra8P70278 393 aa13.64□□□□□ -0.23
Sptan1-208ENSMUST00000129241 Slc24a1Q91WD8 1130 aa13.61□□□□□ -0.23
Sptan1-208ENSMUST00000129241 HrcG5E8J6 738 aa13.55□□□□□ -0.24
Sptan1-208ENSMUST00000129241 Il27Q8K3I6 234 aa13.53□□□□□ -0.24
Sptan1-208ENSMUST00000129241 Amer1Q7TS75 1132 aa13.53□□□□□ -0.24
Sptan1-208ENSMUST00000129241 Kdm5dQ62240 1548 aa13.48□□□□□ -0.25
Sptan1-208ENSMUST00000129241 Ap3b1Q9Z1T1 1105 aa13.42□□□□□ -0.26
Sptan1-208ENSMUST00000129241 Cdk11bP24788 784 aaKnown RBP13.41□□□□□ -0.26
Sptan1-208ENSMUST00000129241 Fam50aQ9WV03 339 aaKnown RBP13.36□□□□□ -0.27
Sptan1-208ENSMUST00000129241 Pcgf6Q99NA9 353 aa13.36□□□□□ -0.27
Sptan1-208ENSMUST00000129241 NclP09405 707 aaKnown RBP13.31□□□□□ -0.28
Sptan1-208ENSMUST00000129241 Neurod1Q60867 357 aa13.3□□□□□ -0.28
Sptan1-208ENSMUST00000129241 ScribQ80U72 1612 aa13.3□□□□□ -0.28
Sptan1-208ENSMUST00000129241 Baz1aO88379 1555 aa13.29□□□□□ -0.28
Sptan1-208ENSMUST00000129241 NrdcQ8BHG1 1161 aa13.28□□□□□ -0.28
Sptan1-208ENSMUST00000129241 Npm1Q61937 292 aaKnown RBP13.26□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Nop58Q6DFW4 536 aaKnown RBP13.25□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Anp32bQ9EST5 272 aaKnown RBP13.24□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Tnnt3Q9QZ47 272 aa13.23□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Ttbk1Q6PCN3 1308 aa13.21□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Eif5bQ05D44 1216 aaKnown RBP13.21□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Ppargc1bQ8VHJ7 1014 aa13.21□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Ercc6F8VPZ5 1481 aa13.21□□□□□ -0.29
Sptan1-208ENSMUST00000129241 Brd4Q9ESU6 1400 aaKnown RBP13.2□□□□□ -0.3
Sptan1-208ENSMUST00000129241 TonslQ6NZL6 1363 aa13.2□□□□□ -0.3
Sptan1-208ENSMUST00000129241 Ubl4bQ9CQ84 188 aa13.2□□□□□ -0.3
Sptan1-208ENSMUST00000129241 NeflP08551 543 aa13.19□□□□□ -0.3
Sptan1-208ENSMUST00000129241 Dcaf1Q80TR8 1506 aa13.19□□□□□ -0.3
Sptan1-208ENSMUST00000129241 Os9Q8K2C7 672 aa13.19□□□□□ -0.3
Sptan1-208ENSMUST00000129241 Supt5hO55201 1082 aaKnown RBP13.15□□□□□ -0.3
Sptan1-208ENSMUST00000129241 Sycp2Q9CUU3 1500 aa13.13□□□□□ -0.31
Sptan1-208ENSMUST00000129241 4933416C03RikQ3V063 378 aa13.12□□□□□ -0.31
Sptan1-208ENSMUST00000129241 Mier1Q5UAK0 511 aa13.11□□□□□ -0.31
Sptan1-208ENSMUST00000129241 Myt1Q8CFC2 1127 aa13.05□□□□□ -0.32
Sptan1-208ENSMUST00000129241 Pds5bQ4VA53 1446 aaKnown RBP13.01□□□□□ -0.33
Sptan1-208ENSMUST00000129241 4930567H17RikQ3V0K5 233 aa12.97□□□□□ -0.33
Sptan1-208ENSMUST00000129241 Plekhg3Q4VAC9 1341 aa12.97□□□□□ -0.33
Sptan1-208ENSMUST00000129241 Lmod2Q3UHZ5 550 aa12.95□□□□□ -0.34
Sptan1-208ENSMUST00000129241 Zbtb7cQ8VCZ7 619 aa12.95□□□□□ -0.34
Sptan1-208ENSMUST00000129241 ClspnQ80YR7 1315 aa12.89□□□□□ -0.35
Sptan1-208ENSMUST00000129241 Rtl5Q5DTT4 599 aa12.87□□□□□ -0.35
Sptan1-208ENSMUST00000129241 Hnrnpul2Q00PI9 745 aaKnown RBP12.85□□□□□ -0.35
Sptan1-208ENSMUST00000129241 Ifnlr1Q8CGK5 535 aa12.84□□□□□ -0.35
Sptan1-208ENSMUST00000129241 Kif15Q6P9L6 1387 aa12.81□□□□□ -0.36
Sptan1-208ENSMUST00000129241 Rsf1E9PWW9 1441 aaKnown RBP12.81□□□□□ -0.36
Sptan1-208ENSMUST00000129241 Crybg2B7ZCC2 1516 aa12.79□□□□□ -0.36
Sptan1-208ENSMUST00000129241 Zbtb4Q5F293 982 aa12.77□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Chic1Q8CBW7 227 aa12.76□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Smarca4Q3TKT4 1613 aaKnown RBP12.76□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Gm13697A2AK42 830 aa12.75□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Erich6D3Z6S9 713 aa12.75□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Ccdc18Q640L5 1455 aa12.74□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Nlrp6Q91WS2 869 aa12.74□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Anp32aO35381 247 aa12.74□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Mapk8ip2Q9ERE9 830 aa12.73□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Clip1Q922J3 1391 aa12.73□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Cep164Q5DU05 1446 aa12.73□□□□□ -0.37
Sptan1-208ENSMUST00000129241 Atp1b4Q99ME6 356 aa12.7□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Eid3Q3V124 375 aa12.69□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Atad2bE9Q166 1460 aaKnown RBP12.66□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Smarca2Q6DIC0 1577 aa12.66□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Cttnbp2B9EJA2 1648 aa12.65□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Fkbp15Q6P9Q6 1216 aaKnown RBP12.65□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Iqgap2Q3UQ44 1575 aa12.65□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Polr3glQ8R0C0 218 aa12.65□□□□□ -0.38
Sptan1-208ENSMUST00000129241 Prdm10Q3UTQ7 1184 aa12.65□□□□□ -0.39
Sptan1-208ENSMUST00000129241 Hdac5Q9Z2V6 1113 aa12.64□□□□□ -0.39
Sptan1-208ENSMUST00000129241 DaxxO35613 739 aa12.63□□□□□ -0.39
Sptan1-208ENSMUST00000129241 Golga3P55937 1487 aa12.62□□□□□ -0.39
Sptan1-208ENSMUST00000129241 Cecr2E9Q2Z1 1453 aa12.59□□□□□ -0.39
Sptan1-208ENSMUST00000129241 Synj1Q8CHC4 1574 aa12.59□□□□□ -0.39
Sptan1-208ENSMUST00000129241 Sall2Q9QX96 1004 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms