RNA–Protein interactions for RNA: ENSMUST00000110658.7

Tubgcp4-203, Transcript of Gamma-tubulin complex component 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Tubgcp4, Length 4,250 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-203ENSMUST00000110658 Rhox8Q6VSS7 320 aa30.09■■■□□ 2.41
Tubgcp4-203ENSMUST00000110658 NischQ80TM9 1593 aa28.18■■■□□ 2.1
Tubgcp4-203ENSMUST00000110658 Rpgrip1Q9EPQ2 1331 aa27.69■■■□□ 2.02
Tubgcp4-203ENSMUST00000110658 Ehmt2Q9Z148 1263 aaKnown RBP27.41■■□□□ 1.98
Tubgcp4-203ENSMUST00000110658 Ccdc136Q3TVA9 1136 aa27.19■■□□□ 1.94
Tubgcp4-203ENSMUST00000110658 Abcc9P70170 1546 aa26.65■■□□□ 1.86
Tubgcp4-203ENSMUST00000110658 Trim41Q5NCC3 630 aa26.54■■□□□ 1.84
Tubgcp4-203ENSMUST00000110658 Cngb1E1AZ71 1325 aa26.44■■□□□ 1.82
Tubgcp4-203ENSMUST00000110658 Ccdc180J3QNE4 1664 aa26.4■■□□□ 1.82
Tubgcp4-203ENSMUST00000110658 Acin1Q9JIX8 1338 aaKnown RBP26.38■■□□□ 1.81
Tubgcp4-203ENSMUST00000110658 Gab3Q8BSM5 595 aa26.33■■□□□ 1.81
Tubgcp4-203ENSMUST00000110658 Esf1Q3V1V3 845 aaKnown RBP26.22■■□□□ 1.79
Tubgcp4-203ENSMUST00000110658 Rtl1Q7M732 1744 aa26.21■■□□□ 1.79
Tubgcp4-203ENSMUST00000110658 HrcG5E8J6 738 aa26.11■■□□□ 1.77
Tubgcp4-203ENSMUST00000110658 Zeb1Q64318 1117 aa26.09■■□□□ 1.77
Tubgcp4-203ENSMUST00000110658 Abcc8B2RUS7 1588 aa26.04■■□□□ 1.76
Tubgcp4-203ENSMUST00000110658 Wdr66E9Q743 1299 aa25.89■■□□□ 1.73
Tubgcp4-203ENSMUST00000110658 Las1lA2BE28 776 aaKnown RBP25.83■■□□□ 1.73
Tubgcp4-203ENSMUST00000110658 Myt1lP97500 1187 aa25.61■■□□□ 1.69
Tubgcp4-203ENSMUST00000110658 Npm2Q80W85 207 aa25.58■■□□□ 1.69
Tubgcp4-203ENSMUST00000110658 Pcgf6Q99NA9 353 aa25.57■■□□□ 1.68
Tubgcp4-203ENSMUST00000110658 NefmP08553 848 aa25.54■■□□□ 1.68
Tubgcp4-203ENSMUST00000110658 Zcchc6Q5BLK4 1491 aaKnown RBP25.47■■□□□ 1.67
Tubgcp4-203ENSMUST00000110658 Gm35339A0A140LHH9 1649 aa25.42■■□□□ 1.66
Tubgcp4-203ENSMUST00000110658 UbtfP25976 765 aaKnown RBP25.42■■□□□ 1.66
Tubgcp4-203ENSMUST00000110658 Supt5hO55201 1082 aaKnown RBP25.13■■□□□ 1.61
Tubgcp4-203ENSMUST00000110658 Ube2uB1AUC4 352 aa25.11■■□□□ 1.61
Tubgcp4-203ENSMUST00000110658 Dcaf1Q80TR8 1506 aa24.85■■□□□ 1.57
Tubgcp4-203ENSMUST00000110658 Mier1Q5UAK0 511 aa24.85■■□□□ 1.57
Tubgcp4-203ENSMUST00000110658 Cdk11bP24788 784 aaKnown RBP24.78■■□□□ 1.56
Tubgcp4-203ENSMUST00000110658 Il27Q8K3I6 234 aa24.77■■□□□ 1.56
Tubgcp4-203ENSMUST00000110658 CenpbP27790 599 aa24.74■■□□□ 1.55
Tubgcp4-203ENSMUST00000110658 Rb1cc1Q9ESK9 1588 aa24.74■■□□□ 1.55
Tubgcp4-203ENSMUST00000110658 Ppargc1bQ8VHJ7 1014 aa24.69■■□□□ 1.54
Tubgcp4-203ENSMUST00000110658 Cep164Q5DU05 1446 aa24.65■■□□□ 1.54
Tubgcp4-203ENSMUST00000110658 Chic1Q8CBW7 227 aa24.64■■□□□ 1.53
Tubgcp4-203ENSMUST00000110658 Nop58Q6DFW4 536 aaKnown RBP24.63■■□□□ 1.53
Tubgcp4-203ENSMUST00000110658 Ap3b1Q9Z1T1 1105 aa24.54■■□□□ 1.52
Tubgcp4-203ENSMUST00000110658 Pelp1Q9DBD5 1123 aaKnown RBP24.48■■□□□ 1.51
Tubgcp4-203ENSMUST00000110658 TonslQ6NZL6 1363 aa24.47■■□□□ 1.51
Tubgcp4-203ENSMUST00000110658 Stra8P70278 393 aa24.44■■□□□ 1.5
Tubgcp4-203ENSMUST00000110658 Brd4Q9ESU6 1400 aaKnown RBP24.44■■□□□ 1.5
Tubgcp4-203ENSMUST00000110658 Fam50aQ9WV03 339 aaKnown RBP24.41■■□□□ 1.5
Tubgcp4-203ENSMUST00000110658 Slc24a1Q91WD8 1130 aa24.39■■□□□ 1.49
Tubgcp4-203ENSMUST00000110658 Neurod1Q60867 357 aa24.36■■□□□ 1.49
Tubgcp4-203ENSMUST00000110658 Plekhg3Q4VAC9 1341 aa24.32■■□□□ 1.48
Tubgcp4-203ENSMUST00000110658 Sall2Q9QX96 1004 aa24.32■■□□□ 1.48
Tubgcp4-203ENSMUST00000110658 NclP09405 707 aaKnown RBP24.27■■□□□ 1.48
Tubgcp4-203ENSMUST00000110658 Baz1aO88379 1555 aa24.27■■□□□ 1.48
Tubgcp4-203ENSMUST00000110658 ClspnQ80YR7 1315 aa24.22■■□□□ 1.47
Tubgcp4-203ENSMUST00000110658 NacadQ5SWP3 1504 aa24.17■■□□□ 1.46
Tubgcp4-203ENSMUST00000110658 Tnnt3Q9QZ47 272 aa24.13■■□□□ 1.45
Tubgcp4-203ENSMUST00000110658 Clip1Q922J3 1391 aa24.01■■□□□ 1.43
Tubgcp4-203ENSMUST00000110658 Eid3Q3V124 375 aa23.99■■□□□ 1.43
Tubgcp4-203ENSMUST00000110658 Lmod2Q3UHZ5 550 aa23.98■■□□□ 1.43
Tubgcp4-203ENSMUST00000110658 Kdm5dQ62240 1548 aa23.95■■□□□ 1.42
Tubgcp4-203ENSMUST00000110658 Anks4bQ8K3X6 423 aa23.95■■□□□ 1.42
Tubgcp4-203ENSMUST00000110658 Rsf1E9PWW9 1441 aaKnown RBP23.91■■□□□ 1.42
Tubgcp4-203ENSMUST00000110658 Golga3P55937 1487 aa23.89■■□□□ 1.42
Tubgcp4-203ENSMUST00000110658 Myt1Q8CFC2 1127 aa23.88■■□□□ 1.41
Tubgcp4-203ENSMUST00000110658 NrdcQ8BHG1 1161 aa23.86■■□□□ 1.41
Tubgcp4-203ENSMUST00000110658 Csrnp3P59055 597 aa23.85■■□□□ 1.41
Tubgcp4-203ENSMUST00000110658 Npm1Q61937 292 aaKnown RBP23.81■■□□□ 1.4
Tubgcp4-203ENSMUST00000110658 Mapk8ip2Q9ERE9 830 aa23.8■■□□□ 1.4
Tubgcp4-203ENSMUST00000110658 Eif5bQ05D44 1216 aaKnown RBP23.79■■□□□ 1.4
Tubgcp4-203ENSMUST00000110658 Aebp2Q9Z248 504 aaKnown RBP23.71■■□□□ 1.39
Tubgcp4-203ENSMUST00000110658 Gm38655A0A286YDK6 273 aa23.7■■□□□ 1.38
Tubgcp4-203ENSMUST00000110658 Ccdc88bQ4QRL3 1481 aa23.6■■□□□ 1.37
Tubgcp4-203ENSMUST00000110658 Anp32bQ9EST5 272 aaKnown RBP23.55■■□□□ 1.36
Tubgcp4-203ENSMUST00000110658 Aplp2Q06335 707 aa23.54■■□□□ 1.36
Tubgcp4-203ENSMUST00000110658 BlmO88700 1416 aa23.43■■□□□ 1.34
Tubgcp4-203ENSMUST00000110658 Setd5Q5XJV7 1441 aa23.43■■□□□ 1.34
Tubgcp4-203ENSMUST00000110658 Ttbk1Q6PCN3 1308 aa23.42■■□□□ 1.34
Tubgcp4-203ENSMUST00000110658 Anp32aO35381 247 aa23.41■■□□□ 1.34
Tubgcp4-203ENSMUST00000110658 1700123L14RikQ3V2K7 440 aa23.41■■□□□ 1.34
Tubgcp4-203ENSMUST00000110658 Ccer2J3QPU5 274 aa23.4■■□□□ 1.34
Tubgcp4-203ENSMUST00000110658 NeflP08551 543 aa23.37■■□□□ 1.33
Tubgcp4-203ENSMUST00000110658 ScribQ80U72 1612 aa23.37■■□□□ 1.33
Tubgcp4-203ENSMUST00000110658 Amer1Q7TS75 1132 aa23.35■■□□□ 1.33
Tubgcp4-203ENSMUST00000110658 Crybg2B7ZCC2 1516 aa23.32■■□□□ 1.32
Tubgcp4-203ENSMUST00000110658 Zbtb7cQ8VCZ7 619 aa23.31■■□□□ 1.32
Tubgcp4-203ENSMUST00000110658 Smarca2Q6DIC0 1577 aa23.27■■□□□ 1.32
Tubgcp4-203ENSMUST00000110658 Ubl4bQ9CQ84 188 aa23.26■■□□□ 1.31
Tubgcp4-203ENSMUST00000110658 Chic2Q9D9G3 165 aa23.26■■□□□ 1.31
Tubgcp4-203ENSMUST00000110658 Rtl5Q5DTT4 599 aa23.25■■□□□ 1.31
Tubgcp4-203ENSMUST00000110658 Eea1Q8BL66 1411 aa23.25■■□□□ 1.31
Tubgcp4-203ENSMUST00000110658 Os9Q8K2C7 672 aa23.24■■□□□ 1.31
Tubgcp4-203ENSMUST00000110658 Sycp2Q9CUU3 1500 aa23.24■■□□□ 1.31
Tubgcp4-203ENSMUST00000110658 Cecr2E9Q2Z1 1453 aa23.2■■□□□ 1.3
Tubgcp4-203ENSMUST00000110658 Kif15Q6P9L6 1387 aa23.19■■□□□ 1.3
Tubgcp4-203ENSMUST00000110658 Cep162Q6ZQ06 1403 aa23.18■■□□□ 1.3
Tubgcp4-203ENSMUST00000110658 Calr4Q3TQS0 420 aa23.15■■□□□ 1.3
Tubgcp4-203ENSMUST00000110658 Zbtb4Q5F293 982 aa23.14■■□□□ 1.3
Tubgcp4-203ENSMUST00000110658 4933416C03RikQ3V063 378 aa23.11■■□□□ 1.29
Tubgcp4-203ENSMUST00000110658 CftrP26361 1476 aa23.1■■□□□ 1.29
Tubgcp4-203ENSMUST00000110658 Hnrnpul2Q00PI9 745 aaKnown RBP23.1■■□□□ 1.29
Tubgcp4-203ENSMUST00000110658 Fmn1Q05860 1466 aa23.08■■□□□ 1.29
Tubgcp4-203ENSMUST00000110658 Mrs2Q5NCE8 434 aa23.06■■□□□ 1.28
Tubgcp4-203ENSMUST00000110658 Ppp4r2Q0VGB7 417 aa22.98■■□□□ 1.27
Tubgcp4-203ENSMUST00000110658 Fkbp15Q6P9Q6 1216 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 118.5 ms