RNA–Protein interactions for RNA: ENSMUST00000109502.8

Ccdc85a-204, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-204ENSMUST00000109502 Rhox8Q6VSS7 320 aa22.39■■□□□ 1.18
Ccdc85a-204ENSMUST00000109502 Rpgrip1Q9EPQ2 1331 aa21.28■■□□□ 1
Ccdc85a-204ENSMUST00000109502 Cngb1E1AZ71 1325 aa20.81■□□□□ 0.92
Ccdc85a-204ENSMUST00000109502 Las1lA2BE28 776 aaKnown RBP20.72■□□□□ 0.91
Ccdc85a-204ENSMUST00000109502 Pelp1Q9DBD5 1123 aaKnown RBP20.41■□□□□ 0.86
Ccdc85a-204ENSMUST00000109502 Ehmt2Q9Z148 1263 aaKnown RBP20.29■□□□□ 0.84
Ccdc85a-204ENSMUST00000109502 Wdr66E9Q743 1299 aa20.13■□□□□ 0.81
Ccdc85a-204ENSMUST00000109502 Zeb1Q64318 1117 aa19.81■□□□□ 0.76
Ccdc85a-204ENSMUST00000109502 Ube2uB1AUC4 352 aa19.76■□□□□ 0.75
Ccdc85a-204ENSMUST00000109502 Esf1Q3V1V3 845 aaKnown RBP19.68■□□□□ 0.74
Ccdc85a-204ENSMUST00000109502 CenpbP27790 599 aa19.65■□□□□ 0.74
Ccdc85a-204ENSMUST00000109502 Ccdc136Q3TVA9 1136 aa19.62■□□□□ 0.73
Ccdc85a-204ENSMUST00000109502 Amer1Q7TS75 1132 aa19.6■□□□□ 0.73
Ccdc85a-204ENSMUST00000109502 NischQ80TM9 1593 aa19.51■□□□□ 0.71
Ccdc85a-204ENSMUST00000109502 Trim41Q5NCC3 630 aa19.49■□□□□ 0.71
Ccdc85a-204ENSMUST00000109502 Gab3Q8BSM5 595 aa19.46■□□□□ 0.71
Ccdc85a-204ENSMUST00000109502 Npm2Q80W85 207 aa19.38■□□□□ 0.69
Ccdc85a-204ENSMUST00000109502 Stra8P70278 393 aa19.34■□□□□ 0.69
Ccdc85a-204ENSMUST00000109502 Acin1Q9JIX8 1338 aaKnown RBP19.27■□□□□ 0.68
Ccdc85a-204ENSMUST00000109502 NefmP08553 848 aa19.27■□□□□ 0.68
Ccdc85a-204ENSMUST00000109502 Myt1lP97500 1187 aa19.18■□□□□ 0.66
Ccdc85a-204ENSMUST00000109502 4930567H17RikQ3V0K5 233 aa19.11■□□□□ 0.65
Ccdc85a-204ENSMUST00000109502 Myt1Q8CFC2 1127 aa19.1■□□□□ 0.65
Ccdc85a-204ENSMUST00000109502 Slc24a1Q91WD8 1130 aa18.94■□□□□ 0.62
Ccdc85a-204ENSMUST00000109502 UbtfP25976 765 aaKnown RBP18.91■□□□□ 0.62
Ccdc85a-204ENSMUST00000109502 Cdk11bP24788 784 aaKnown RBP18.89■□□□□ 0.61
Ccdc85a-204ENSMUST00000109502 4933416C03RikQ3V063 378 aa18.8■□□□□ 0.6
Ccdc85a-204ENSMUST00000109502 Tnnt3Q9QZ47 272 aa18.79■□□□□ 0.6
Ccdc85a-204ENSMUST00000109502 Ttbk1Q6PCN3 1308 aa18.78■□□□□ 0.6
Ccdc85a-204ENSMUST00000109502 Anp32bQ9EST5 272 aaKnown RBP18.66■□□□□ 0.58
Ccdc85a-204ENSMUST00000109502 Pcgf6Q99NA9 353 aa18.65■□□□□ 0.58
Ccdc85a-204ENSMUST00000109502 NrdcQ8BHG1 1161 aa18.65■□□□□ 0.58
Ccdc85a-204ENSMUST00000109502 NeflP08551 543 aa18.61■□□□□ 0.57
Ccdc85a-204ENSMUST00000109502 Nop58Q6DFW4 536 aaKnown RBP18.59■□□□□ 0.57
Ccdc85a-204ENSMUST00000109502 HrcG5E8J6 738 aa18.55■□□□□ 0.56
Ccdc85a-204ENSMUST00000109502 Rtl5Q5DTT4 599 aa18.53■□□□□ 0.56
Ccdc85a-204ENSMUST00000109502 Ccdc180J3QNE4 1664 aa18.48■□□□□ 0.55
Ccdc85a-204ENSMUST00000109502 NclP09405 707 aaKnown RBP18.41■□□□□ 0.54
Ccdc85a-204ENSMUST00000109502 Eif5bQ05D44 1216 aaKnown RBP18.39■□□□□ 0.53
Ccdc85a-204ENSMUST00000109502 Il27Q8K3I6 234 aa18.36■□□□□ 0.53
Ccdc85a-204ENSMUST00000109502 Fam50aQ9WV03 339 aaKnown RBP18.31■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Rtl1Q7M732 1744 aa18.3■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Neurod1Q60867 357 aa18.29■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Zcchc6Q5BLK4 1491 aaKnown RBP18.27■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Abcc9P70170 1546 aa18.23■□□□□ 0.51
Ccdc85a-204ENSMUST00000109502 TonslQ6NZL6 1363 aa18.22■□□□□ 0.51
Ccdc85a-204ENSMUST00000109502 Supt5hO55201 1082 aaKnown RBP18.2■□□□□ 0.5
Ccdc85a-204ENSMUST00000109502 Os9Q8K2C7 672 aa18.2■□□□□ 0.5
Ccdc85a-204ENSMUST00000109502 DiexfQ8BTT6 772 aaKnown RBP18.12■□□□□ 0.49
Ccdc85a-204ENSMUST00000109502 Ppargc1bQ8VHJ7 1014 aa18.12■□□□□ 0.49
Ccdc85a-204ENSMUST00000109502 Ap3b1Q9Z1T1 1105 aa18.09■□□□□ 0.49
Ccdc85a-204ENSMUST00000109502 Anp32aO35381 247 aa18.06■□□□□ 0.48
Ccdc85a-204ENSMUST00000109502 DaxxO35613 739 aa18■□□□□ 0.47
Ccdc85a-204ENSMUST00000109502 Gm35339A0A140LHH9 1649 aa17.92■□□□□ 0.46
Ccdc85a-204ENSMUST00000109502 ClspnQ80YR7 1315 aa17.92■□□□□ 0.46
Ccdc85a-204ENSMUST00000109502 Mier1Q5UAK0 511 aa17.91■□□□□ 0.46
Ccdc85a-204ENSMUST00000109502 Npm1Q61937 292 aaKnown RBP17.85■□□□□ 0.45
Ccdc85a-204ENSMUST00000109502 Abcc8B2RUS7 1588 aa17.74■□□□□ 0.43
Ccdc85a-204ENSMUST00000109502 Nlrp6Q91WS2 869 aa17.64■□□□□ 0.41
Ccdc85a-204ENSMUST00000109502 Anks4bQ8K3X6 423 aa17.62■□□□□ 0.41
Ccdc85a-204ENSMUST00000109502 Aplp2Q06335 707 aa17.6■□□□□ 0.41
Ccdc85a-204ENSMUST00000109502 Hnrnpul2Q00PI9 745 aaKnown RBP17.56■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Lmod2Q3UHZ5 550 aa17.56■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Zbtb7cQ8VCZ7 619 aa17.56■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Brd4Q9ESU6 1400 aaKnown RBP17.55■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Plekhg3Q4VAC9 1341 aa17.53■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Polr3glQ8R0C0 218 aa17.52■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Hdac5Q9Z2V6 1113 aa17.52■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Upf2A2AT37 1269 aaKnown RBP17.5■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 CatipB9EKE5 520 aa17.5■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Ccdc9Q8VC31 543 aaKnown RBP17.49■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 ArxO35085 564 aa17.48■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Csrnp3P59055 597 aa17.48■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Gm13697A2AK42 830 aa17.48■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Gm38655A0A286YDK6 273 aa17.46■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Calr4Q3TQS0 420 aa17.44■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Ythdc1E9Q5K9 736 aaKnown RBP17.44■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Chic1Q8CBW7 227 aa17.44■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Zbtb4Q5F293 982 aa17.43■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Sall2Q9QX96 1004 aa17.42■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Mapk8ip2Q9ERE9 830 aa17.42■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Ppp4r2Q0VGB7 417 aa17.4■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Ccer2J3QPU5 274 aa17.38■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Erich6D3Z6S9 713 aa17.37■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Atp1b4Q99ME6 356 aa17.36■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Hsp90aa1P07901 733 aaKnown RBP17.34■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Eid3Q3V124 375 aa17.34■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Wdr43Q6ZQL4 677 aaKnown RBP17.33■□□□□ 0.36
Ccdc85a-204ENSMUST00000109502 Prdm10Q3UTQ7 1184 aa17.32■□□□□ 0.36
Ccdc85a-204ENSMUST00000109502 Lmod3E9QA62 571 aa17.24■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Clip1Q922J3 1391 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Ubl4bQ9CQ84 188 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Trim44Q9QXA7 346 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Ifnlr1Q8CGK5 535 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Cep164Q5DU05 1446 aa17.21■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Gm13695A2AK44 830 aa17.21■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 Dcaf1Q80TR8 1506 aa17.2■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 DekQ7TNV0 380 aaKnown RBP17.2■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 Rb1cc1Q9ESK9 1588 aa17.17■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 Mrs2Q5NCE8 434 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms