RNA–Protein interactions for RNA: ENSMUST00000100348.9

Cacna1b-203, Transcript of Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cacna1b, Length 7,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1b-203ENSMUST00000100348 Rhox8Q6VSS7 320 aa23.32■■□□□ 1.32
Cacna1b-203ENSMUST00000100348 NischQ80TM9 1593 aa21.72■■□□□ 1.07
Cacna1b-203ENSMUST00000100348 Ehmt2Q9Z148 1263 aaKnown RBP21.53■■□□□ 1.04
Cacna1b-203ENSMUST00000100348 Ccdc136Q3TVA9 1136 aa21.19■□□□□ 0.98
Cacna1b-203ENSMUST00000100348 Rpgrip1Q9EPQ2 1331 aa21.1■□□□□ 0.97
Cacna1b-203ENSMUST00000100348 Cngb1E1AZ71 1325 aa20.73■□□□□ 0.91
Cacna1b-203ENSMUST00000100348 Gab3Q8BSM5 595 aa20.55■□□□□ 0.88
Cacna1b-203ENSMUST00000100348 Esf1Q3V1V3 845 aaKnown RBP20.51■□□□□ 0.87
Cacna1b-203ENSMUST00000100348 Abcc9P70170 1546 aa20.36■□□□□ 0.85
Cacna1b-203ENSMUST00000100348 Trim41Q5NCC3 630 aa20.34■□□□□ 0.85
Cacna1b-203ENSMUST00000100348 Ccdc180J3QNE4 1664 aa20.25■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Rtl1Q7M732 1744 aa20.24■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Zeb1Q64318 1117 aa20.24■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Las1lA2BE28 776 aaKnown RBP20.23■□□□□ 0.83
Cacna1b-203ENSMUST00000100348 Wdr66E9Q743 1299 aa20.1■□□□□ 0.81
Cacna1b-203ENSMUST00000100348 Myt1lP97500 1187 aa20.04■□□□□ 0.8
Cacna1b-203ENSMUST00000100348 Gm35339A0A140LHH9 1649 aa20.01■□□□□ 0.79
Cacna1b-203ENSMUST00000100348 Npm2Q80W85 207 aa19.97■□□□□ 0.79
Cacna1b-203ENSMUST00000100348 Acin1Q9JIX8 1338 aaKnown RBP19.96■□□□□ 0.79
Cacna1b-203ENSMUST00000100348 Abcc8B2RUS7 1588 aa19.93■□□□□ 0.78
Cacna1b-203ENSMUST00000100348 Pcgf6Q99NA9 353 aa19.89■□□□□ 0.78
Cacna1b-203ENSMUST00000100348 Zcchc6Q5BLK4 1491 aaKnown RBP19.76■□□□□ 0.75
Cacna1b-203ENSMUST00000100348 UbtfP25976 765 aaKnown RBP19.75■□□□□ 0.75
Cacna1b-203ENSMUST00000100348 Ube2uB1AUC4 352 aa19.72■□□□□ 0.75
Cacna1b-203ENSMUST00000100348 HrcG5E8J6 738 aa19.56■□□□□ 0.72
Cacna1b-203ENSMUST00000100348 Il27Q8K3I6 234 aa19.47■□□□□ 0.71
Cacna1b-203ENSMUST00000100348 CenpbP27790 599 aa19.4■□□□□ 0.7
Cacna1b-203ENSMUST00000100348 Ap3b1Q9Z1T1 1105 aa19.38■□□□□ 0.69
Cacna1b-203ENSMUST00000100348 Supt5hO55201 1082 aaKnown RBP19.38■□□□□ 0.69
Cacna1b-203ENSMUST00000100348 Ppargc1bQ8VHJ7 1014 aa19.37■□□□□ 0.69
Cacna1b-203ENSMUST00000100348 NefmP08553 848 aa19.24■□□□□ 0.67
Cacna1b-203ENSMUST00000100348 Rb1cc1Q9ESK9 1588 aa19.21■□□□□ 0.67
Cacna1b-203ENSMUST00000100348 Myt1Q8CFC2 1127 aa19.14■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 DiexfQ8BTT6 772 aaKnown RBP19.14■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 Neurod1Q60867 357 aa19.13■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 Slc24a1Q91WD8 1130 aa19.12■□□□□ 0.65
Cacna1b-203ENSMUST00000100348 Mier1Q5UAK0 511 aa19.07■□□□□ 0.64
Cacna1b-203ENSMUST00000100348 Fam50aQ9WV03 339 aaKnown RBP18.97■□□□□ 0.63
Cacna1b-203ENSMUST00000100348 Chic1Q8CBW7 227 aa18.95■□□□□ 0.62
Cacna1b-203ENSMUST00000100348 Dcaf1Q80TR8 1506 aa18.94■□□□□ 0.62
Cacna1b-203ENSMUST00000100348 Pelp1Q9DBD5 1123 aaKnown RBP18.91■□□□□ 0.62
Cacna1b-203ENSMUST00000100348 Plekhg3Q4VAC9 1341 aa18.87■□□□□ 0.61
Cacna1b-203ENSMUST00000100348 Csrnp3P59055 597 aa18.83■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Cdk11bP24788 784 aaKnown RBP18.82■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Amer1Q7TS75 1132 aa18.82■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Gm38655A0A286YDK6 273 aa18.79■□□□□ 0.6
Cacna1b-203ENSMUST00000100348 Ttbk1Q6PCN3 1308 aa18.76■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 TonslQ6NZL6 1363 aa18.74■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 NclP09405 707 aaKnown RBP18.73■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 Lmod2Q3UHZ5 550 aa18.72■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 Nop58Q6DFW4 536 aaKnown RBP18.71■□□□□ 0.59
Cacna1b-203ENSMUST00000100348 Brd4Q9ESU6 1400 aaKnown RBP18.63■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Mapk8ip2Q9ERE9 830 aa18.61■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Cep164Q5DU05 1446 aa18.61■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 1700123L14RikQ3V2K7 440 aa18.61■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Baz1aO88379 1555 aa18.6■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 Eif5bQ05D44 1216 aaKnown RBP18.58■□□□□ 0.57
Cacna1b-203ENSMUST00000100348 NacadQ5SWP3 1504 aa18.57■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Kdm5dQ62240 1548 aa18.55■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Eid3Q3V124 375 aa18.52■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Zbtb7cQ8VCZ7 619 aa18.52■□□□□ 0.56
Cacna1b-203ENSMUST00000100348 Npm1Q61937 292 aaKnown RBP18.48■□□□□ 0.55
Cacna1b-203ENSMUST00000100348 Stra8P70278 393 aa18.48■□□□□ 0.55
Cacna1b-203ENSMUST00000100348 Anks4bQ8K3X6 423 aa18.48■□□□□ 0.55
Cacna1b-203ENSMUST00000100348 Sall2Q9QX96 1004 aa18.45■□□□□ 0.54
Cacna1b-203ENSMUST00000100348 Clip1Q922J3 1391 aa18.39■□□□□ 0.53
Cacna1b-203ENSMUST00000100348 Aplp2Q06335 707 aa18.34■□□□□ 0.53
Cacna1b-203ENSMUST00000100348 ClspnQ80YR7 1315 aa18.32■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Zbtb4Q5F293 982 aa18.31■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 NrdcQ8BHG1 1161 aa18.31■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Bcl11aQ9QYE3 773 aa18.3■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Ifnlr1Q8CGK5 535 aa18.27■□□□□ 0.52
Cacna1b-203ENSMUST00000100348 Os9Q8K2C7 672 aa18.26■□□□□ 0.51
Cacna1b-203ENSMUST00000100348 Rsf1E9PWW9 1441 aaKnown RBP18.23■□□□□ 0.51
Cacna1b-203ENSMUST00000100348 Tnnt3Q9QZ47 272 aa18.2■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Ubl4bQ9CQ84 188 aa18.18■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Fkbp15Q6P9Q6 1216 aaKnown RBP18.18■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Golga3P55937 1487 aa18.17■□□□□ 0.5
Cacna1b-203ENSMUST00000100348 Hnrnpul2Q00PI9 745 aaKnown RBP18.12■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 ScribQ80U72 1612 aa18.12■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 Chic2Q9D9G3 165 aa18.11■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 4933416C03RikQ3V063 378 aa18.1■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 Aebp2Q9Z248 504 aaKnown RBP18.1■□□□□ 0.49
Cacna1b-203ENSMUST00000100348 Fam71e1A1L3C1 212 aa18.06■□□□□ 0.48
Cacna1b-203ENSMUST00000100348 Ccdc88bQ4QRL3 1481 aa18.04■□□□□ 0.48
Cacna1b-203ENSMUST00000100348 BlmO88700 1416 aa18.03■□□□□ 0.48
Cacna1b-203ENSMUST00000100348 Prdm10Q3UTQ7 1184 aa18.01■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Erich6D3Z6S9 713 aa18■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Rtl5Q5DTT4 599 aa18■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Anp32aO35381 247 aa17.99■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 Anp32bQ9EST5 272 aaKnown RBP17.97■□□□□ 0.47
Cacna1b-203ENSMUST00000100348 NeflP08551 543 aa17.94■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Kif15Q6P9L6 1387 aa17.93■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Setd5Q5XJV7 1441 aa17.93■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Cecr2E9Q2Z1 1453 aa17.9■□□□□ 0.46
Cacna1b-203ENSMUST00000100348 Sycp2Q9CUU3 1500 aa17.87■□□□□ 0.45
Cacna1b-203ENSMUST00000100348 Synj1Q8CHC4 1574 aa17.83■□□□□ 0.45
Cacna1b-203ENSMUST00000100348 Smarca2Q6DIC0 1577 aa17.79■□□□□ 0.44
Cacna1b-203ENSMUST00000100348 Atp1b4Q99ME6 356 aa17.74■□□□□ 0.43
Cacna1b-203ENSMUST00000100348 PrkcshO08795 521 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms