RNA–Protein interactions for RNA: ENSMUST00000098098.8

Rnf38-202, Transcript of E3 ubiquitin-protein ligase RNF38, mousemouse

TSL 1 (best) BASIC

Gene Rnf38, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38-202ENSMUST00000098098 Rhox8Q6VSS7 320 aa26.99■■□□□ 1.91
Rnf38-202ENSMUST00000098098 NischQ80TM9 1593 aa25.64■■□□□ 1.7
Rnf38-202ENSMUST00000098098 Ccdc136Q3TVA9 1136 aa24.43■■□□□ 1.5
Rnf38-202ENSMUST00000098098 Abcc9P70170 1546 aa24.23■■□□□ 1.47
Rnf38-202ENSMUST00000098098 Ehmt2Q9Z148 1263 aaKnown RBP24.19■■□□□ 1.46
Rnf38-202ENSMUST00000098098 Rpgrip1Q9EPQ2 1331 aa24.12■■□□□ 1.45
Rnf38-202ENSMUST00000098098 Cngb1E1AZ71 1325 aa23.84■■□□□ 1.41
Rnf38-202ENSMUST00000098098 Trim41Q5NCC3 630 aa23.79■■□□□ 1.4
Rnf38-202ENSMUST00000098098 Esf1Q3V1V3 845 aaKnown RBP23.79■■□□□ 1.4
Rnf38-202ENSMUST00000098098 Abcc8B2RUS7 1588 aa23.78■■□□□ 1.4
Rnf38-202ENSMUST00000098098 Gab3Q8BSM5 595 aa23.53■■□□□ 1.36
Rnf38-202ENSMUST00000098098 Ccdc180J3QNE4 1664 aa23.36■■□□□ 1.33
Rnf38-202ENSMUST00000098098 Gm35339A0A140LHH9 1649 aa23.35■■□□□ 1.33
Rnf38-202ENSMUST00000098098 Rtl1Q7M732 1744 aa23.28■■□□□ 1.32
Rnf38-202ENSMUST00000098098 Zcchc6Q5BLK4 1491 aaKnown RBP23.15■■□□□ 1.3
Rnf38-202ENSMUST00000098098 HrcG5E8J6 738 aa23.08■■□□□ 1.28
Rnf38-202ENSMUST00000098098 Npm2Q80W85 207 aa23.07■■□□□ 1.28
Rnf38-202ENSMUST00000098098 Acin1Q9JIX8 1338 aaKnown RBP23.06■■□□□ 1.28
Rnf38-202ENSMUST00000098098 Myt1lP97500 1187 aa22.99■■□□□ 1.27
Rnf38-202ENSMUST00000098098 Zeb1Q64318 1117 aa22.96■■□□□ 1.27
Rnf38-202ENSMUST00000098098 Wdr66E9Q743 1299 aa22.82■■□□□ 1.24
Rnf38-202ENSMUST00000098098 Las1lA2BE28 776 aaKnown RBP22.74■■□□□ 1.23
Rnf38-202ENSMUST00000098098 UbtfP25976 765 aaKnown RBP22.55■■□□□ 1.2
Rnf38-202ENSMUST00000098098 Il27Q8K3I6 234 aa22.54■■□□□ 1.2
Rnf38-202ENSMUST00000098098 Rb1cc1Q9ESK9 1588 aa22.51■■□□□ 1.19
Rnf38-202ENSMUST00000098098 Ube2uB1AUC4 352 aa22.51■■□□□ 1.19
Rnf38-202ENSMUST00000098098 NefmP08553 848 aa22.37■■□□□ 1.17
Rnf38-202ENSMUST00000098098 Pcgf6Q99NA9 353 aa22.28■■□□□ 1.16
Rnf38-202ENSMUST00000098098 Dcaf1Q80TR8 1506 aa22.24■■□□□ 1.15
Rnf38-202ENSMUST00000098098 NacadQ5SWP3 1504 aa22.22■■□□□ 1.15
Rnf38-202ENSMUST00000098098 Brd4Q9ESU6 1400 aaKnown RBP22.13■■□□□ 1.13
Rnf38-202ENSMUST00000098098 Ap3b1Q9Z1T1 1105 aa22.08■■□□□ 1.12
Rnf38-202ENSMUST00000098098 Baz1aO88379 1555 aa22.05■■□□□ 1.12
Rnf38-202ENSMUST00000098098 Chic1Q8CBW7 227 aa22.03■■□□□ 1.12
Rnf38-202ENSMUST00000098098 Kdm5dQ62240 1548 aa21.98■■□□□ 1.11
Rnf38-202ENSMUST00000098098 Supt5hO55201 1082 aaKnown RBP21.98■■□□□ 1.11
Rnf38-202ENSMUST00000098098 Cep164Q5DU05 1446 aa21.91■■□□□ 1.1
Rnf38-202ENSMUST00000098098 Mier1Q5UAK0 511 aa21.85■■□□□ 1.09
Rnf38-202ENSMUST00000098098 Fam50aQ9WV03 339 aaKnown RBP21.81■■□□□ 1.08
Rnf38-202ENSMUST00000098098 Npm1Q61937 292 aaKnown RBP21.78■■□□□ 1.08
Rnf38-202ENSMUST00000098098 Ppargc1bQ8VHJ7 1014 aa21.77■■□□□ 1.08
Rnf38-202ENSMUST00000098098 Plekhg3Q4VAC9 1341 aa21.7■■□□□ 1.06
Rnf38-202ENSMUST00000098098 Cdk11bP24788 784 aaKnown RBP21.68■■□□□ 1.06
Rnf38-202ENSMUST00000098098 CenpbP27790 599 aa21.58■■□□□ 1.04
Rnf38-202ENSMUST00000098098 Lmod2Q3UHZ5 550 aa21.56■■□□□ 1.04
Rnf38-202ENSMUST00000098098 Nop58Q6DFW4 536 aaKnown RBP21.55■■□□□ 1.04
Rnf38-202ENSMUST00000098098 Slc24a1Q91WD8 1130 aa21.54■■□□□ 1.04
Rnf38-202ENSMUST00000098098 TonslQ6NZL6 1363 aa21.53■■□□□ 1.04
Rnf38-202ENSMUST00000098098 Golga3P55937 1487 aa21.52■■□□□ 1.04
Rnf38-202ENSMUST00000098098 ScribQ80U72 1612 aa21.51■■□□□ 1.03
Rnf38-202ENSMUST00000098098 NclP09405 707 aaKnown RBP21.47■■□□□ 1.03
Rnf38-202ENSMUST00000098098 Clip1Q922J3 1391 aa21.46■■□□□ 1.03
Rnf38-202ENSMUST00000098098 Stra8P70278 393 aa21.42■■□□□ 1.02
Rnf38-202ENSMUST00000098098 Neurod1Q60867 357 aa21.42■■□□□ 1.02
Rnf38-202ENSMUST00000098098 Ubl4bQ9CQ84 188 aa21.42■■□□□ 1.02
Rnf38-202ENSMUST00000098098 Pelp1Q9DBD5 1123 aaKnown RBP21.41■■□□□ 1.02
Rnf38-202ENSMUST00000098098 Sycp2Q9CUU3 1500 aa21.37■■□□□ 1.01
Rnf38-202ENSMUST00000098098 Rsf1E9PWW9 1441 aaKnown RBP21.36■■□□□ 1.01
Rnf38-202ENSMUST00000098098 Sall2Q9QX96 1004 aa21.26■□□□□ 0.99
Rnf38-202ENSMUST00000098098 Crybg2B7ZCC2 1516 aa21.23■□□□□ 0.99
Rnf38-202ENSMUST00000098098 Eid3Q3V124 375 aa21.22■□□□□ 0.99
Rnf38-202ENSMUST00000098098 ClspnQ80YR7 1315 aa21.21■□□□□ 0.99
Rnf38-202ENSMUST00000098098 Kif15Q6P9L6 1387 aa21.19■□□□□ 0.98
Rnf38-202ENSMUST00000098098 Ccdc88bQ4QRL3 1481 aa21.14■□□□□ 0.98
Rnf38-202ENSMUST00000098098 Cecr2E9Q2Z1 1453 aa21.12■□□□□ 0.97
Rnf38-202ENSMUST00000098098 Smarca2Q6DIC0 1577 aa21.1■□□□□ 0.97
Rnf38-202ENSMUST00000098098 Tnnt3Q9QZ47 272 aa21.09■□□□□ 0.97
Rnf38-202ENSMUST00000098098 Zbtb7cQ8VCZ7 619 aa21.06■□□□□ 0.96
Rnf38-202ENSMUST00000098098 Ercc6F8VPZ5 1481 aa21.05■□□□□ 0.96
Rnf38-202ENSMUST00000098098 Setd5Q5XJV7 1441 aa21.03■□□□□ 0.96
Rnf38-202ENSMUST00000098098 NrdcQ8BHG1 1161 aa21.02■□□□□ 0.96
Rnf38-202ENSMUST00000098098 BlmO88700 1416 aa21■□□□□ 0.95
Rnf38-202ENSMUST00000098098 Mapk8ip2Q9ERE9 830 aa21■□□□□ 0.95
Rnf38-202ENSMUST00000098098 Eif5bQ05D44 1216 aaKnown RBP20.99■□□□□ 0.95
Rnf38-202ENSMUST00000098098 CftrP26361 1476 aa20.98■□□□□ 0.95
Rnf38-202ENSMUST00000098098 Fkbp15Q6P9Q6 1216 aaKnown RBP20.97■□□□□ 0.95
Rnf38-202ENSMUST00000098098 Pds5bQ4VA53 1446 aaKnown RBP20.96■□□□□ 0.95
Rnf38-202ENSMUST00000098098 Os9Q8K2C7 672 aa20.94■□□□□ 0.94
Rnf38-202ENSMUST00000098098 Ifnlr1Q8CGK5 535 aa20.92■□□□□ 0.94
Rnf38-202ENSMUST00000098098 Ccdc18Q640L5 1455 aa20.91■□□□□ 0.94
Rnf38-202ENSMUST00000098098 Anp32bQ9EST5 272 aaKnown RBP20.89■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Synj1Q8CHC4 1574 aa20.88■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Hnrnpul2Q00PI9 745 aaKnown RBP20.88■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Fmn1Q05860 1466 aa20.86■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Chic2Q9D9G3 165 aa20.86■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Eea1Q8BL66 1411 aa20.84■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Anks4bQ8K3X6 423 aa20.83■□□□□ 0.93
Rnf38-202ENSMUST00000098098 Csrnp3P59055 597 aa20.81■□□□□ 0.92
Rnf38-202ENSMUST00000098098 Ccer2J3QPU5 274 aa20.8■□□□□ 0.92
Rnf38-202ENSMUST00000098098 Aebp2Q9Z248 504 aaKnown RBP20.78■□□□□ 0.92
Rnf38-202ENSMUST00000098098 Gm38655A0A286YDK6 273 aa20.78■□□□□ 0.92
Rnf38-202ENSMUST00000098098 Cep162Q6ZQ06 1403 aa20.76■□□□□ 0.91
Rnf38-202ENSMUST00000098098 Zbtb4Q5F293 982 aa20.7■□□□□ 0.9
Rnf38-202ENSMUST00000098098 Smarca4Q3TKT4 1613 aaKnown RBP20.68■□□□□ 0.9
Rnf38-202ENSMUST00000098098 Atad2bE9Q166 1460 aaKnown RBP20.66■□□□□ 0.9
Rnf38-202ENSMUST00000098098 Erich6D3Z6S9 713 aa20.63■□□□□ 0.89
Rnf38-202ENSMUST00000098098 Myt1Q8CFC2 1127 aa20.62■□□□□ 0.89
Rnf38-202ENSMUST00000098098 Cttnbp2B9EJA2 1648 aa20.58■□□□□ 0.88
Rnf38-202ENSMUST00000098098 NeflP08551 543 aa20.56■□□□□ 0.88
Rnf38-202ENSMUST00000098098 Ttbk1Q6PCN3 1308 aa20.55■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 103.7 ms