RNA–Protein interactions for RNA: ENSMUST00000093114.4

Shroom1-202, Transcript of Protein Shroom1, mousemouse

TSL 2 BASIC

Gene Shroom1, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1-202ENSMUST00000093114 NischQ80TM9 1593 aa23.32■■□□□ 1.32
Shroom1-202ENSMUST00000093114 Gm35339A0A140LHH9 1649 aa22.78■■□□□ 1.24
Shroom1-202ENSMUST00000093114 Abcc9P70170 1546 aa22.52■■□□□ 1.2
Shroom1-202ENSMUST00000093114 Abcc8B2RUS7 1588 aa22.21■■□□□ 1.15
Shroom1-202ENSMUST00000093114 Rhox8Q6VSS7 320 aa21.81■■□□□ 1.08
Shroom1-202ENSMUST00000093114 Rpgrip1Q9EPQ2 1331 aa20.97■□□□□ 0.95
Shroom1-202ENSMUST00000093114 Rtl1Q7M732 1744 aa20.95■□□□□ 0.94
Shroom1-202ENSMUST00000093114 ScribQ80U72 1612 aa20.92■□□□□ 0.94
Shroom1-202ENSMUST00000093114 Ccdc180J3QNE4 1664 aa20.87■□□□□ 0.93
Shroom1-202ENSMUST00000093114 Ehmt2Q9Z148 1263 aaKnown RBP20.7■□□□□ 0.9
Shroom1-202ENSMUST00000093114 Acin1Q9JIX8 1338 aaKnown RBP20.61■□□□□ 0.89
Shroom1-202ENSMUST00000093114 Kdm5dQ62240 1548 aa20.47■□□□□ 0.87
Shroom1-202ENSMUST00000093114 Rb1cc1Q9ESK9 1588 aa20.4■□□□□ 0.86
Shroom1-202ENSMUST00000093114 Dcaf1Q80TR8 1506 aa20.39■□□□□ 0.86
Shroom1-202ENSMUST00000093114 Zcchc6Q5BLK4 1491 aaKnown RBP20.34■□□□□ 0.85
Shroom1-202ENSMUST00000093114 Pcgf6Q99NA9 353 aa20.27■□□□□ 0.83
Shroom1-202ENSMUST00000093114 NacadQ5SWP3 1504 aa20.27■□□□□ 0.83
Shroom1-202ENSMUST00000093114 Ccdc136Q3TVA9 1136 aa20.24■□□□□ 0.83
Shroom1-202ENSMUST00000093114 Baz1aO88379 1555 aa20.08■□□□□ 0.8
Shroom1-202ENSMUST00000093114 HrcG5E8J6 738 aa19.94■□□□□ 0.78
Shroom1-202ENSMUST00000093114 Sycp2Q9CUU3 1500 aa19.87■□□□□ 0.77
Shroom1-202ENSMUST00000093114 Supt5hO55201 1082 aaKnown RBP19.83■□□□□ 0.76
Shroom1-202ENSMUST00000093114 Trim41Q5NCC3 630 aa19.74■□□□□ 0.75
Shroom1-202ENSMUST00000093114 Crybg2B7ZCC2 1516 aa19.6■□□□□ 0.73
Shroom1-202ENSMUST00000093114 Smarca2Q6DIC0 1577 aa19.58■□□□□ 0.73
Shroom1-202ENSMUST00000093114 Neurod1Q60867 357 aa19.57■□□□□ 0.72
Shroom1-202ENSMUST00000093114 BicraF8VPZ9 1578 aa19.54■□□□□ 0.72
Shroom1-202ENSMUST00000093114 Cecr2E9Q2Z1 1453 aa19.49■□□□□ 0.71
Shroom1-202ENSMUST00000093114 Zeb1Q64318 1117 aa19.42■□□□□ 0.7
Shroom1-202ENSMUST00000093114 Gab3Q8BSM5 595 aa19.32■□□□□ 0.68
Shroom1-202ENSMUST00000093114 Cngb1E1AZ71 1325 aa19.31■□□□□ 0.68
Shroom1-202ENSMUST00000093114 Cep164Q5DU05 1446 aa19.19■□□□□ 0.66
Shroom1-202ENSMUST00000093114 Esf1Q3V1V3 845 aaKnown RBP19.18■□□□□ 0.66
Shroom1-202ENSMUST00000093114 Brd4Q9ESU6 1400 aaKnown RBP19.16■□□□□ 0.66
Shroom1-202ENSMUST00000093114 Synj1Q8CHC4 1574 aa19.13■□□□□ 0.65
Shroom1-202ENSMUST00000093114 Sall2Q9QX96 1004 aa19.12■□□□□ 0.65
Shroom1-202ENSMUST00000093114 Chic1Q8CBW7 227 aa19.11■□□□□ 0.65
Shroom1-202ENSMUST00000093114 Mier1Q5UAK0 511 aa19.06■□□□□ 0.64
Shroom1-202ENSMUST00000093114 Las1lA2BE28 776 aaKnown RBP19.03■□□□□ 0.64
Shroom1-202ENSMUST00000093114 CftrP26361 1476 aa19.02■□□□□ 0.64
Shroom1-202ENSMUST00000093114 1700123L14RikQ3V2K7 440 aa18.99■□□□□ 0.63
Shroom1-202ENSMUST00000093114 NefmP08553 848 aa18.98■□□□□ 0.63
Shroom1-202ENSMUST00000093114 Csrnp3P59055 597 aa18.97■□□□□ 0.63
Shroom1-202ENSMUST00000093114 Rsf1E9PWW9 1441 aaKnown RBP18.94■□□□□ 0.62
Shroom1-202ENSMUST00000093114 Smarca4Q3TKT4 1613 aaKnown RBP18.92■□□□□ 0.62
Shroom1-202ENSMUST00000093114 Ccdc88bQ4QRL3 1481 aa18.9■□□□□ 0.62
Shroom1-202ENSMUST00000093114 Golga3P55937 1487 aa18.9■□□□□ 0.62
Shroom1-202ENSMUST00000093114 Anks4bQ8K3X6 423 aa18.84■□□□□ 0.61
Shroom1-202ENSMUST00000093114 Wdr66E9Q743 1299 aa18.79■□□□□ 0.6
Shroom1-202ENSMUST00000093114 Ppargc1bQ8VHJ7 1014 aa18.79■□□□□ 0.6
Shroom1-202ENSMUST00000093114 Cttnbp2B9EJA2 1648 aa18.78■□□□□ 0.6
Shroom1-202ENSMUST00000093114 Aebp2Q9Z248 504 aaKnown RBP18.75■□□□□ 0.59
Shroom1-202ENSMUST00000093114 Iqgap2Q3UQ44 1575 aa18.75■□□□□ 0.59
Shroom1-202ENSMUST00000093114 Atad2bE9Q166 1460 aaKnown RBP18.71■□□□□ 0.59
Shroom1-202ENSMUST00000093114 UbtfP25976 765 aaKnown RBP18.69■□□□□ 0.58
Shroom1-202ENSMUST00000093114 Pds5bQ4VA53 1446 aaKnown RBP18.67■□□□□ 0.58
Shroom1-202ENSMUST00000093114 Gm38655A0A286YDK6 273 aa18.64■□□□□ 0.57
Shroom1-202ENSMUST00000093114 Top2bQ64511 1612 aa18.6■□□□□ 0.57
Shroom1-202ENSMUST00000093114 Cdk11bP24788 784 aaKnown RBP18.6■□□□□ 0.57
Shroom1-202ENSMUST00000093114 Cc2d2aQ8CFW7 1633 aa18.59■□□□□ 0.57
Shroom1-202ENSMUST00000093114 Nop58Q6DFW4 536 aaKnown RBP18.58■□□□□ 0.57
Shroom1-202ENSMUST00000093114 Myt1lP97500 1187 aa18.53■□□□□ 0.56
Shroom1-202ENSMUST00000093114 Frmpd1A2AKB4 1549 aa18.49■□□□□ 0.55
Shroom1-202ENSMUST00000093114 Il27Q8K3I6 234 aa18.48■□□□□ 0.55
Shroom1-202ENSMUST00000093114 CenpbP27790 599 aa18.47■□□□□ 0.55
Shroom1-202ENSMUST00000093114 Aplp2Q06335 707 aa18.47■□□□□ 0.55
Shroom1-202ENSMUST00000093114 ClspnQ80YR7 1315 aa18.46■□□□□ 0.55
Shroom1-202ENSMUST00000093114 Fmn1Q05860 1466 aa18.39■□□□□ 0.53
Shroom1-202ENSMUST00000093114 Wdr62Q3U3T8 1523 aa18.38■□□□□ 0.53
Shroom1-202ENSMUST00000093114 Ercc6F8VPZ5 1481 aa18.36■□□□□ 0.53
Shroom1-202ENSMUST00000093114 Npm2Q80W85 207 aa18.32■□□□□ 0.52
Shroom1-202ENSMUST00000093114 Kif15Q6P9L6 1387 aa18.31■□□□□ 0.52
Shroom1-202ENSMUST00000093114 TonslQ6NZL6 1363 aa18.27■□□□□ 0.51
Shroom1-202ENSMUST00000093114 Top2aQ01320 1528 aaKnown RBP18.25■□□□□ 0.51
Shroom1-202ENSMUST00000093114 Ubl4bQ9CQ84 188 aa18.24■□□□□ 0.51
Shroom1-202ENSMUST00000093114 Myt1Q8CFC2 1127 aa18.22■□□□□ 0.51
Shroom1-202ENSMUST00000093114 Plekhg3Q4VAC9 1341 aa18.22■□□□□ 0.51
Shroom1-202ENSMUST00000093114 Dnajc5bQ9CQ94 199 aa18.21■□□□□ 0.51
Shroom1-202ENSMUST00000093114 Rapgef2Q8CHG7 1496 aa18.2■□□□□ 0.5
Shroom1-202ENSMUST00000093114 Unc13aQ4KUS2 1712 aa18.17■□□□□ 0.5
Shroom1-202ENSMUST00000093114 SafbD3YXK2 937 aaKnown RBP18.14■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Mapk8ip2Q9ERE9 830 aa18.14■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Phldb1Q6PDH0 1371 aaKnown RBP18.12■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Cep162Q6ZQ06 1403 aa18.12■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Thoc2B1AZI6 1594 aaKnown RBP18.1■□□□□ 0.49
Shroom1-202ENSMUST00000093114 PtprkP35822 1457 aa18.1■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Hnrnpul2Q00PI9 745 aaKnown RBP18.1■□□□□ 0.49
Shroom1-202ENSMUST00000093114 TnnQ80Z71 1560 aa18.1■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Lamc3Q9R0B6 1581 aa18.08■□□□□ 0.49
Shroom1-202ENSMUST00000093114 Fam71e1A1L3C1 212 aa18.07■□□□□ 0.48
Shroom1-202ENSMUST00000093114 Ap3b1Q9Z1T1 1105 aa18.05■□□□□ 0.48
Shroom1-202ENSMUST00000093114 Clip1Q922J3 1391 aa18.04■□□□□ 0.48
Shroom1-202ENSMUST00000093114 Cux2P70298 1426 aa18.04■□□□□ 0.48
Shroom1-202ENSMUST00000093114 Npm1Q61937 292 aaKnown RBP18.03■□□□□ 0.48
Shroom1-202ENSMUST00000093114 Eid3Q3V124 375 aa18.02■□□□□ 0.48
Shroom1-202ENSMUST00000093114 Camsap1A2AHC3 1581 aa17.96■□□□□ 0.47
Shroom1-202ENSMUST00000093114 Ccdc18Q640L5 1455 aa17.93■□□□□ 0.46
Shroom1-202ENSMUST00000093114 DiexfQ8BTT6 772 aaKnown RBP17.91■□□□□ 0.46
Shroom1-202ENSMUST00000093114 Arhgap35Q91YM2 1499 aa17.89■□□□□ 0.45
Shroom1-202ENSMUST00000093114 Grin2bQ01097 1482 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 117.1 ms