RNA–Protein interactions for RNA: ENSMUST00000058470.15

Polr2a-201, Transcript of DNA-directed RNA polymerase II subunit RPB1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr2a, Length 6,740 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2a-201ENSMUST00000058470 Rhox8Q6VSS7 320 aa17.15■□□□□ 0.34
Polr2a-201ENSMUST00000058470 Amer1Q7TS75 1132 aa15.86■□□□□ 0.13
Polr2a-201ENSMUST00000058470 Ehmt2Q9Z148 1263 aaKnown RBP15.74■□□□□ 0.11
Polr2a-201ENSMUST00000058470 Cngb1E1AZ71 1325 aa15.69■□□□□ 0.1
Polr2a-201ENSMUST00000058470 Las1lA2BE28 776 aaKnown RBP15.66■□□□□ 0.1
Polr2a-201ENSMUST00000058470 Pelp1Q9DBD5 1123 aaKnown RBP15.52■□□□□ 0.08
Polr2a-201ENSMUST00000058470 Wdr66E9Q743 1299 aa15.37■□□□□ 0.05
Polr2a-201ENSMUST00000058470 Rpgrip1Q9EPQ2 1331 aa15.35■□□□□ 0.05
Polr2a-201ENSMUST00000058470 Esf1Q3V1V3 845 aaKnown RBP15.35■□□□□ 0.05
Polr2a-201ENSMUST00000058470 Ube2uB1AUC4 352 aa15.24■□□□□ 0.03
Polr2a-201ENSMUST00000058470 Ttbk1Q6PCN3 1308 aa15.2■□□□□ 0.02
Polr2a-201ENSMUST00000058470 Zeb1Q64318 1117 aa15.2■□□□□ 0.02
Polr2a-201ENSMUST00000058470 Ccdc136Q3TVA9 1136 aa15.16■□□□□ 0.02
Polr2a-201ENSMUST00000058470 4930567H17RikQ3V0K5 233 aa15.02■□□□□ -0
Polr2a-201ENSMUST00000058470 Npm2Q80W85 207 aa14.97□□□□□ -0.01
Polr2a-201ENSMUST00000058470 CenpbP27790 599 aa14.93□□□□□ -0.02
Polr2a-201ENSMUST00000058470 Gab3Q8BSM5 595 aa14.92□□□□□ -0.02
Polr2a-201ENSMUST00000058470 Myt1lP97500 1187 aa14.82□□□□□ -0.04
Polr2a-201ENSMUST00000058470 4933416C03RikQ3V063 378 aa14.72□□□□□ -0.05
Polr2a-201ENSMUST00000058470 Slc24a1Q91WD8 1130 aa14.68□□□□□ -0.06
Polr2a-201ENSMUST00000058470 Myt1Q8CFC2 1127 aa14.62□□□□□ -0.07
Polr2a-201ENSMUST00000058470 Trim41Q5NCC3 630 aa14.61□□□□□ -0.07
Polr2a-201ENSMUST00000058470 Il27Q8K3I6 234 aa14.44□□□□□ -0.1
Polr2a-201ENSMUST00000058470 DiexfQ8BTT6 772 aaKnown RBP14.37□□□□□ -0.11
Polr2a-201ENSMUST00000058470 UbtfP25976 765 aaKnown RBP14.27□□□□□ -0.12
Polr2a-201ENSMUST00000058470 NischQ80TM9 1593 aa14.24□□□□□ -0.13
Polr2a-201ENSMUST00000058470 Eif5bQ05D44 1216 aaKnown RBP14.14□□□□□ -0.15
Polr2a-201ENSMUST00000058470 Ppargc1bQ8VHJ7 1014 aa14.13□□□□□ -0.15
Polr2a-201ENSMUST00000058470 Ap3b1Q9Z1T1 1105 aa14.13□□□□□ -0.15
Polr2a-201ENSMUST00000058470 Os9Q8K2C7 672 aa14.11□□□□□ -0.15
Polr2a-201ENSMUST00000058470 Stra8P70278 393 aa14.04□□□□□ -0.16
Polr2a-201ENSMUST00000058470 Neurod1Q60867 357 aa14.04□□□□□ -0.16
Polr2a-201ENSMUST00000058470 Cdk11bP24788 784 aaKnown RBP14.04□□□□□ -0.16
Polr2a-201ENSMUST00000058470 Gm35339A0A140LHH9 1649 aa14.02□□□□□ -0.17
Polr2a-201ENSMUST00000058470 Abcc9P70170 1546 aa13.99□□□□□ -0.17
Polr2a-201ENSMUST00000058470 Ifnlr1Q8CGK5 535 aa13.97□□□□□ -0.17
Polr2a-201ENSMUST00000058470 Fam50aQ9WV03 339 aaKnown RBP13.96□□□□□ -0.17
Polr2a-201ENSMUST00000058470 Ythdc1E9Q5K9 736 aaKnown RBP13.95□□□□□ -0.18
Polr2a-201ENSMUST00000058470 DaxxO35613 739 aa13.93□□□□□ -0.18
Polr2a-201ENSMUST00000058470 Pcgf6Q99NA9 353 aa13.93□□□□□ -0.18
Polr2a-201ENSMUST00000058470 Zbtb7cQ8VCZ7 619 aa13.92□□□□□ -0.18
Polr2a-201ENSMUST00000058470 HrcG5E8J6 738 aa13.9□□□□□ -0.18
Polr2a-201ENSMUST00000058470 Gm13697A2AK42 830 aa13.9□□□□□ -0.18
Polr2a-201ENSMUST00000058470 Acin1Q9JIX8 1338 aaKnown RBP13.9□□□□□ -0.18
Polr2a-201ENSMUST00000058470 Plppr3Q7TPB0 716 aa13.89□□□□□ -0.19
Polr2a-201ENSMUST00000058470 Rtl5Q5DTT4 599 aa13.87□□□□□ -0.19
Polr2a-201ENSMUST00000058470 Lmod3E9QA62 571 aa13.86□□□□□ -0.19
Polr2a-201ENSMUST00000058470 NeflP08551 543 aa13.85□□□□□ -0.19
Polr2a-201ENSMUST00000058470 CatipB9EKE5 520 aa13.84□□□□□ -0.19
Polr2a-201ENSMUST00000058470 Gm38655A0A286YDK6 273 aa13.83□□□□□ -0.19
Polr2a-201ENSMUST00000058470 Nop58Q6DFW4 536 aaKnown RBP13.81□□□□□ -0.2
Polr2a-201ENSMUST00000058470 Chic1Q8CBW7 227 aa13.8□□□□□ -0.2
Polr2a-201ENSMUST00000058470 Zcchc6Q5BLK4 1491 aaKnown RBP13.8□□□□□ -0.2
Polr2a-201ENSMUST00000058470 NrdcQ8BHG1 1161 aa13.77□□□□□ -0.2
Polr2a-201ENSMUST00000058470 Anp32bQ9EST5 272 aaKnown RBP13.77□□□□□ -0.21
Polr2a-201ENSMUST00000058470 ArxO35085 564 aa13.75□□□□□ -0.21
Polr2a-201ENSMUST00000058470 NefmP08553 848 aa13.73□□□□□ -0.21
Polr2a-201ENSMUST00000058470 Hnrnpul2Q00PI9 745 aaKnown RBP13.73□□□□□ -0.21
Polr2a-201ENSMUST00000058470 NclP09405 707 aaKnown RBP13.72□□□□□ -0.21
Polr2a-201ENSMUST00000058470 Tnnt3Q9QZ47 272 aa13.7□□□□□ -0.22
Polr2a-201ENSMUST00000058470 Npm1Q61937 292 aaKnown RBP13.69□□□□□ -0.22
Polr2a-201ENSMUST00000058470 Atp1b4Q99ME6 356 aa13.69□□□□□ -0.22
Polr2a-201ENSMUST00000058470 Supt5hO55201 1082 aaKnown RBP13.66□□□□□ -0.22
Polr2a-201ENSMUST00000058470 Erich6D3Z6S9 713 aa13.61□□□□□ -0.23
Polr2a-201ENSMUST00000058470 Gm13695A2AK44 830 aa13.6□□□□□ -0.23
Polr2a-201ENSMUST00000058470 Lmod2Q3UHZ5 550 aa13.59□□□□□ -0.23
Polr2a-201ENSMUST00000058470 Zbtb4Q5F293 982 aa13.58□□□□□ -0.23
Polr2a-201ENSMUST00000058470 Fkbp15Q6P9Q6 1216 aaKnown RBP13.58□□□□□ -0.24
Polr2a-201ENSMUST00000058470 Prdm10Q3UTQ7 1184 aa13.53□□□□□ -0.24
Polr2a-201ENSMUST00000058470 Ccdc180J3QNE4 1664 aa13.45□□□□□ -0.26
Polr2a-201ENSMUST00000058470 Anp32aO35381 247 aa13.42□□□□□ -0.26
Polr2a-201ENSMUST00000058470 Csrnp3P59055 597 aa13.41□□□□□ -0.26
Polr2a-201ENSMUST00000058470 Vsig10D3YX43 558 aa13.4□□□□□ -0.26
Polr2a-201ENSMUST00000058470 Safb2Q80YR5 991 aaKnown RBP13.35□□□□□ -0.27
Polr2a-201ENSMUST00000058470 Nlrp6Q91WS2 869 aa13.35□□□□□ -0.27
Polr2a-201ENSMUST00000058470 Plekhg3Q4VAC9 1341 aa13.34□□□□□ -0.27
Polr2a-201ENSMUST00000058470 Upf2A2AT37 1269 aaKnown RBP13.33□□□□□ -0.28
Polr2a-201ENSMUST00000058470 Mapk8ip2Q9ERE9 830 aa13.33□□□□□ -0.28
Polr2a-201ENSMUST00000058470 Polr3glQ8R0C0 218 aa13.33□□□□□ -0.28
Polr2a-201ENSMUST00000058470 TonslQ6NZL6 1363 aa13.32□□□□□ -0.28
Polr2a-201ENSMUST00000058470 Rtl1Q7M732 1744 aa13.3□□□□□ -0.28
Polr2a-201ENSMUST00000058470 Ubl4bQ9CQ84 188 aa13.26□□□□□ -0.29
Polr2a-201ENSMUST00000058470 Rangap1P46061 589 aaKnown RBP13.25□□□□□ -0.29
Polr2a-201ENSMUST00000058470 Podxl2Q8CAE9 603 aa13.23□□□□□ -0.29
Polr2a-201ENSMUST00000058470 Znf316Q6PGE4 1016 aa13.2□□□□□ -0.3
Polr2a-201ENSMUST00000058470 DekQ7TNV0 380 aaKnown RBP13.2□□□□□ -0.3
Polr2a-201ENSMUST00000058470 P3h3Q8CG70 732 aa13.16□□□□□ -0.3
Polr2a-201ENSMUST00000058470 Ppp4r2Q0VGB7 417 aa13.14□□□□□ -0.31
Polr2a-201ENSMUST00000058470 Mier1Q5UAK0 511 aa13.13□□□□□ -0.31
Polr2a-201ENSMUST00000058470 Hsp90aa1P07901 733 aaKnown RBP13.12□□□□□ -0.31
Polr2a-201ENSMUST00000058470 Hdac5Q9Z2V6 1113 aa13.08□□□□□ -0.32
Polr2a-201ENSMUST00000058470 Trim44Q9QXA7 346 aa13.06□□□□□ -0.32
Polr2a-201ENSMUST00000058470 Bcl11aQ9QYE3 773 aa13.05□□□□□ -0.32
Polr2a-201ENSMUST00000058470 Arid4bA2CG63 1314 aaKnown RBP13.04□□□□□ -0.32
Polr2a-201ENSMUST00000058470 Taok2Q6ZQ29 1240 aa13.03□□□□□ -0.32
Polr2a-201ENSMUST00000058470 MyclP10166 368 aa13.02□□□□□ -0.32
Polr2a-201ENSMUST00000058470 Eid3Q3V124 375 aa13.01□□□□□ -0.33
Polr2a-201ENSMUST00000058470 Irx6Q9ER75 438 aa12.98□□□□□ -0.33
Polr2a-201ENSMUST00000058470 Chic2Q9D9G3 165 aa12.98□□□□□ -0.33
Polr2a-201ENSMUST00000058470 Fam71e1A1L3C1 212 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms