RNA–Protein interactions for RNA: ENSMUST00000053932.6

Gm28230-201, Transcript of Predicted gene 28230, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gm28230, Length 3,527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28230-201ENSMUST00000053932 NischQ80TM9 1593 aa26.48■■□□□ 1.83
Gm28230-201ENSMUST00000053932 Gm35339A0A140LHH9 1649 aa25.39■■□□□ 1.65
Gm28230-201ENSMUST00000053932 Rhox8Q6VSS7 320 aa25.35■■□□□ 1.65
Gm28230-201ENSMUST00000053932 Abcc9P70170 1546 aa25.33■■□□□ 1.64
Gm28230-201ENSMUST00000053932 Abcc8B2RUS7 1588 aa25.15■■□□□ 1.62
Gm28230-201ENSMUST00000053932 ScribQ80U72 1612 aa23.81■■□□□ 1.4
Gm28230-201ENSMUST00000053932 Ccdc136Q3TVA9 1136 aa23.62■■□□□ 1.37
Gm28230-201ENSMUST00000053932 Kdm5dQ62240 1548 aa23.4■■□□□ 1.34
Gm28230-201ENSMUST00000053932 NacadQ5SWP3 1504 aa23.19■■□□□ 1.3
Gm28230-201ENSMUST00000053932 Zcchc6Q5BLK4 1491 aaKnown RBP23.16■■□□□ 1.3
Gm28230-201ENSMUST00000053932 Rb1cc1Q9ESK9 1588 aa23.16■■□□□ 1.3
Gm28230-201ENSMUST00000053932 Rpgrip1Q9EPQ2 1331 aa23.05■■□□□ 1.28
Gm28230-201ENSMUST00000053932 Ehmt2Q9Z148 1263 aaKnown RBP23.04■■□□□ 1.28
Gm28230-201ENSMUST00000053932 Dcaf1Q80TR8 1506 aa22.71■■□□□ 1.23
Gm28230-201ENSMUST00000053932 Sycp2Q9CUU3 1500 aa22.7■■□□□ 1.22
Gm28230-201ENSMUST00000053932 Baz1aO88379 1555 aa22.65■■□□□ 1.22
Gm28230-201ENSMUST00000053932 Esf1Q3V1V3 845 aaKnown RBP22.62■■□□□ 1.21
Gm28230-201ENSMUST00000053932 Cngb1E1AZ71 1325 aa22.6■■□□□ 1.21
Gm28230-201ENSMUST00000053932 Trim41Q5NCC3 630 aa22.41■■□□□ 1.18
Gm28230-201ENSMUST00000053932 BicraF8VPZ9 1578 aa22.31■■□□□ 1.16
Gm28230-201ENSMUST00000053932 Cecr2E9Q2Z1 1453 aa22.31■■□□□ 1.16
Gm28230-201ENSMUST00000053932 Gab3Q8BSM5 595 aa22.17■■□□□ 1.14
Gm28230-201ENSMUST00000053932 Pcgf6Q99NA9 353 aa22.15■■□□□ 1.14
Gm28230-201ENSMUST00000053932 Acin1Q9JIX8 1338 aaKnown RBP22.12■■□□□ 1.13
Gm28230-201ENSMUST00000053932 Rtl1Q7M732 1744 aa22.01■■□□□ 1.11
Gm28230-201ENSMUST00000053932 Il27Q8K3I6 234 aa22■■□□□ 1.11
Gm28230-201ENSMUST00000053932 Ccdc180J3QNE4 1664 aa22■■□□□ 1.11
Gm28230-201ENSMUST00000053932 Smarca2Q6DIC0 1577 aa21.97■■□□□ 1.11
Gm28230-201ENSMUST00000053932 Dnajc5bQ9CQ94 199 aa21.92■■□□□ 1.1
Gm28230-201ENSMUST00000053932 Crybg2B7ZCC2 1516 aa21.9■■□□□ 1.1
Gm28230-201ENSMUST00000053932 Chic1Q8CBW7 227 aa21.85■■□□□ 1.09
Gm28230-201ENSMUST00000053932 Brd4Q9ESU6 1400 aaKnown RBP21.81■■□□□ 1.08
Gm28230-201ENSMUST00000053932 Synj1Q8CHC4 1574 aa21.7■■□□□ 1.06
Gm28230-201ENSMUST00000053932 Pds5bQ4VA53 1446 aaKnown RBP21.63■■□□□ 1.05
Gm28230-201ENSMUST00000053932 CftrP26361 1476 aa21.62■■□□□ 1.05
Gm28230-201ENSMUST00000053932 Ubl4bQ9CQ84 188 aa21.62■■□□□ 1.05
Gm28230-201ENSMUST00000053932 Smarca4Q3TKT4 1613 aaKnown RBP21.57■■□□□ 1.04
Gm28230-201ENSMUST00000053932 Myt1lP97500 1187 aa21.56■■□□□ 1.04
Gm28230-201ENSMUST00000053932 Atad2bE9Q166 1460 aaKnown RBP21.54■■□□□ 1.04
Gm28230-201ENSMUST00000053932 Las1lA2BE28 776 aaKnown RBP21.53■■□□□ 1.04
Gm28230-201ENSMUST00000053932 Neurod1Q60867 357 aa21.48■■□□□ 1.03
Gm28230-201ENSMUST00000053932 Npm2Q80W85 207 aa21.48■■□□□ 1.03
Gm28230-201ENSMUST00000053932 Iqgap2Q3UQ44 1575 aa21.48■■□□□ 1.03
Gm28230-201ENSMUST00000053932 HrcG5E8J6 738 aa21.47■■□□□ 1.03
Gm28230-201ENSMUST00000053932 Zeb1Q64318 1117 aa21.43■■□□□ 1.02
Gm28230-201ENSMUST00000053932 Rsf1E9PWW9 1441 aaKnown RBP21.4■■□□□ 1.02
Gm28230-201ENSMUST00000053932 Ercc6F8VPZ5 1481 aa21.4■■□□□ 1.02
Gm28230-201ENSMUST00000053932 Supt5hO55201 1082 aaKnown RBP21.4■■□□□ 1.02
Gm28230-201ENSMUST00000053932 Ccdc88bQ4QRL3 1481 aa21.39■■□□□ 1.02
Gm28230-201ENSMUST00000053932 Golga3P55937 1487 aa21.36■■□□□ 1.01
Gm28230-201ENSMUST00000053932 Kif15Q6P9L6 1387 aa21.32■■□□□ 1
Gm28230-201ENSMUST00000053932 Npm1Q61937 292 aaKnown RBP21.28■■□□□ 1
Gm28230-201ENSMUST00000053932 Frmpd1A2AKB4 1549 aa21.26■□□□□ 0.99
Gm28230-201ENSMUST00000053932 CenpbP27790 599 aa21.24■□□□□ 0.99
Gm28230-201ENSMUST00000053932 Cttnbp2B9EJA2 1648 aa21.21■□□□□ 0.99
Gm28230-201ENSMUST00000053932 DiexfQ8BTT6 772 aaKnown RBP21.15■□□□□ 0.98
Gm28230-201ENSMUST00000053932 Myt1Q8CFC2 1127 aa21.13■□□□□ 0.97
Gm28230-201ENSMUST00000053932 1700123L14RikQ3V2K7 440 aa21.11■□□□□ 0.97
Gm28230-201ENSMUST00000053932 Ap3b1Q9Z1T1 1105 aa21.1■□□□□ 0.97
Gm28230-201ENSMUST00000053932 Phldb1Q6PDH0 1371 aaKnown RBP21.05■□□□□ 0.96
Gm28230-201ENSMUST00000053932 Cc2d2aQ8CFW7 1633 aa21.05■□□□□ 0.96
Gm28230-201ENSMUST00000053932 Wdr62Q3U3T8 1523 aa21.03■□□□□ 0.96
Gm28230-201ENSMUST00000053932 Cux2P70298 1426 aa20.98■□□□□ 0.95
Gm28230-201ENSMUST00000053932 Cep164Q5DU05 1446 aa20.97■□□□□ 0.95
Gm28230-201ENSMUST00000053932 Ppargc1bQ8VHJ7 1014 aa20.92■□□□□ 0.94
Gm28230-201ENSMUST00000053932 Csrnp3P59055 597 aa20.86■□□□□ 0.93
Gm28230-201ENSMUST00000053932 Wdr66E9Q743 1299 aa20.86■□□□□ 0.93
Gm28230-201ENSMUST00000053932 UbtfP25976 765 aaKnown RBP20.86■□□□□ 0.93
Gm28230-201ENSMUST00000053932 Thoc2B1AZI6 1594 aaKnown RBP20.8■□□□□ 0.92
Gm28230-201ENSMUST00000053932 Fmn1Q05860 1466 aa20.79■□□□□ 0.92
Gm28230-201ENSMUST00000053932 Mier1Q5UAK0 511 aa20.75■□□□□ 0.91
Gm28230-201ENSMUST00000053932 Plekhg3Q4VAC9 1341 aa20.72■□□□□ 0.91
Gm28230-201ENSMUST00000053932 Top2bQ64511 1612 aa20.71■□□□□ 0.91
Gm28230-201ENSMUST00000053932 Bcl11aQ9QYE3 773 aa20.71■□□□□ 0.91
Gm28230-201ENSMUST00000053932 Ccdc18Q640L5 1455 aa20.68■□□□□ 0.9
Gm28230-201ENSMUST00000053932 Lmod2Q3UHZ5 550 aa20.65■□□□□ 0.9
Gm28230-201ENSMUST00000053932 Anks4bQ8K3X6 423 aa20.63■□□□□ 0.89
Gm28230-201ENSMUST00000053932 PtprkP35822 1457 aa20.61■□□□□ 0.89
Gm28230-201ENSMUST00000053932 Rapgef2Q8CHG7 1496 aa20.61■□□□□ 0.89
Gm28230-201ENSMUST00000053932 Fkbp15Q6P9Q6 1216 aaKnown RBP20.57■□□□□ 0.88
Gm28230-201ENSMUST00000053932 Dhx29Q6PGC1 1365 aaKnown RBP20.57■□□□□ 0.88
Gm28230-201ENSMUST00000053932 Unc13aQ4KUS2 1712 aa20.57■□□□□ 0.88
Gm28230-201ENSMUST00000053932 LrpprcQ6PB66 1392 aaKnown RBP20.54■□□□□ 0.88
Gm28230-201ENSMUST00000053932 Ifnlr1Q8CGK5 535 aa20.54■□□□□ 0.88
Gm28230-201ENSMUST00000053932 Sall2Q9QX96 1004 aa20.53■□□□□ 0.88
Gm28230-201ENSMUST00000053932 NefmP08553 848 aa20.5■□□□□ 0.87
Gm28230-201ENSMUST00000053932 Mrc2Q64449 1479 aa20.5■□□□□ 0.87
Gm28230-201ENSMUST00000053932 Fam135aQ6NS59 1506 aa20.49■□□□□ 0.87
Gm28230-201ENSMUST00000053932 Aplp2Q06335 707 aa20.48■□□□□ 0.87
Gm28230-201ENSMUST00000053932 Lamc3Q9R0B6 1581 aa20.46■□□□□ 0.87
Gm28230-201ENSMUST00000053932 Cep162Q6ZQ06 1403 aa20.43■□□□□ 0.86
Gm28230-201ENSMUST00000053932 Rad54l2Q99NG0 1466 aa20.43■□□□□ 0.86
Gm28230-201ENSMUST00000053932 Top2aQ01320 1528 aaKnown RBP20.43■□□□□ 0.86
Gm28230-201ENSMUST00000053932 Baz1bQ9Z277 1479 aa20.4■□□□□ 0.86
Gm28230-201ENSMUST00000053932 Camsap1A2AHC3 1581 aa20.39■□□□□ 0.86
Gm28230-201ENSMUST00000053932 Gm38655A0A286YDK6 273 aa20.39■□□□□ 0.85
Gm28230-201ENSMUST00000053932 Clip1Q922J3 1391 aa20.39■□□□□ 0.85
Gm28230-201ENSMUST00000053932 Pelp1Q9DBD5 1123 aaKnown RBP20.39■□□□□ 0.85
Gm28230-201ENSMUST00000053932 Duox2A2AQ99 1517 aa20.34■□□□□ 0.85
Gm28230-201ENSMUST00000053932 Plb1Q3TTY0 1478 aa20.33■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms