RNA–Protein interactions for RNA: ENSMUST00000039174.10

Prdm1-201, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Prdm1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-201ENSMUST00000039174 Rhox8Q6VSS7 320 aa20.39■□□□□ 0.85
Prdm1-201ENSMUST00000039174 Ehmt2Q9Z148 1263 aaKnown RBP18.4■□□□□ 0.54
Prdm1-201ENSMUST00000039174 Rpgrip1Q9EPQ2 1331 aa18.31■□□□□ 0.52
Prdm1-201ENSMUST00000039174 Cngb1E1AZ71 1325 aa18.16■□□□□ 0.5
Prdm1-201ENSMUST00000039174 Ube2uB1AUC4 352 aa18.07■□□□□ 0.48
Prdm1-201ENSMUST00000039174 Wdr66E9Q743 1299 aa18.06■□□□□ 0.48
Prdm1-201ENSMUST00000039174 Las1lA2BE28 776 aaKnown RBP17.97■□□□□ 0.47
Prdm1-201ENSMUST00000039174 Esf1Q3V1V3 845 aaKnown RBP17.95■□□□□ 0.46
Prdm1-201ENSMUST00000039174 Pelp1Q9DBD5 1123 aaKnown RBP17.91■□□□□ 0.46
Prdm1-201ENSMUST00000039174 Ccdc136Q3TVA9 1136 aa17.89■□□□□ 0.46
Prdm1-201ENSMUST00000039174 Zeb1Q64318 1117 aa17.81■□□□□ 0.44
Prdm1-201ENSMUST00000039174 Gab3Q8BSM5 595 aa17.74■□□□□ 0.43
Prdm1-201ENSMUST00000039174 Npm2Q80W85 207 aa17.63■□□□□ 0.41
Prdm1-201ENSMUST00000039174 Myt1lP97500 1187 aa17.52■□□□□ 0.4
Prdm1-201ENSMUST00000039174 Amer1Q7TS75 1132 aa17.42■□□□□ 0.38
Prdm1-201ENSMUST00000039174 Trim41Q5NCC3 630 aa17.38■□□□□ 0.37
Prdm1-201ENSMUST00000039174 Slc24a1Q91WD8 1130 aa17.19■□□□□ 0.34
Prdm1-201ENSMUST00000039174 CenpbP27790 599 aa17.14■□□□□ 0.33
Prdm1-201ENSMUST00000039174 UbtfP25976 765 aaKnown RBP17.09■□□□□ 0.33
Prdm1-201ENSMUST00000039174 Stra8P70278 393 aa17■□□□□ 0.31
Prdm1-201ENSMUST00000039174 NefmP08553 848 aa16.92■□□□□ 0.3
Prdm1-201ENSMUST00000039174 4930567H17RikQ3V0K5 233 aa16.84■□□□□ 0.29
Prdm1-201ENSMUST00000039174 Il27Q8K3I6 234 aa16.82■□□□□ 0.28
Prdm1-201ENSMUST00000039174 Ttbk1Q6PCN3 1308 aa16.79■□□□□ 0.28
Prdm1-201ENSMUST00000039174 Acin1Q9JIX8 1338 aaKnown RBP16.77■□□□□ 0.27
Prdm1-201ENSMUST00000039174 Neurod1Q60867 357 aa16.7■□□□□ 0.26
Prdm1-201ENSMUST00000039174 NrdcQ8BHG1 1161 aa16.67■□□□□ 0.26
Prdm1-201ENSMUST00000039174 Anp32bQ9EST5 272 aaKnown RBP16.67■□□□□ 0.26
Prdm1-201ENSMUST00000039174 4933416C03RikQ3V063 378 aa16.67■□□□□ 0.26
Prdm1-201ENSMUST00000039174 Cdk11bP24788 784 aaKnown RBP16.64■□□□□ 0.25
Prdm1-201ENSMUST00000039174 Os9Q8K2C7 672 aa16.64■□□□□ 0.25
Prdm1-201ENSMUST00000039174 Fam50aQ9WV03 339 aaKnown RBP16.62■□□□□ 0.25
Prdm1-201ENSMUST00000039174 NeflP08551 543 aa16.56■□□□□ 0.24
Prdm1-201ENSMUST00000039174 Eif5bQ05D44 1216 aaKnown RBP16.55■□□□□ 0.24
Prdm1-201ENSMUST00000039174 Ap3b1Q9Z1T1 1105 aa16.55■□□□□ 0.24
Prdm1-201ENSMUST00000039174 NclP09405 707 aaKnown RBP16.54■□□□□ 0.24
Prdm1-201ENSMUST00000039174 Ppargc1bQ8VHJ7 1014 aa16.48■□□□□ 0.23
Prdm1-201ENSMUST00000039174 Nop58Q6DFW4 536 aaKnown RBP16.41■□□□□ 0.22
Prdm1-201ENSMUST00000039174 Tnnt3Q9QZ47 272 aa16.39■□□□□ 0.21
Prdm1-201ENSMUST00000039174 HrcG5E8J6 738 aa16.37■□□□□ 0.21
Prdm1-201ENSMUST00000039174 Pcgf6Q99NA9 353 aa16.35■□□□□ 0.21
Prdm1-201ENSMUST00000039174 Myt1Q8CFC2 1127 aa16.32■□□□□ 0.2
Prdm1-201ENSMUST00000039174 Zbtb7cQ8VCZ7 619 aa16.26■□□□□ 0.19
Prdm1-201ENSMUST00000039174 NischQ80TM9 1593 aa16.25■□□□□ 0.19
Prdm1-201ENSMUST00000039174 Gm13697A2AK42 830 aa16.15■□□□□ 0.18
Prdm1-201ENSMUST00000039174 Chic1Q8CBW7 227 aa16.15■□□□□ 0.18
Prdm1-201ENSMUST00000039174 TonslQ6NZL6 1363 aa16.15■□□□□ 0.18
Prdm1-201ENSMUST00000039174 Hnrnpul2Q00PI9 745 aaKnown RBP16.14■□□□□ 0.17
Prdm1-201ENSMUST00000039174 Zbtb4Q5F293 982 aa16.05■□□□□ 0.16
Prdm1-201ENSMUST00000039174 Lmod2Q3UHZ5 550 aa16.04■□□□□ 0.16
Prdm1-201ENSMUST00000039174 Ifnlr1Q8CGK5 535 aa16.04■□□□□ 0.16
Prdm1-201ENSMUST00000039174 Supt5hO55201 1082 aaKnown RBP16.03■□□□□ 0.16
Prdm1-201ENSMUST00000039174 Prdm10Q3UTQ7 1184 aa15.98■□□□□ 0.15
Prdm1-201ENSMUST00000039174 Atp1b4Q99ME6 356 aa15.98■□□□□ 0.15
Prdm1-201ENSMUST00000039174 Zcchc6Q5BLK4 1491 aaKnown RBP15.96■□□□□ 0.15
Prdm1-201ENSMUST00000039174 DaxxO35613 739 aa15.96■□□□□ 0.15
Prdm1-201ENSMUST00000039174 Erich6D3Z6S9 713 aa15.94■□□□□ 0.14
Prdm1-201ENSMUST00000039174 Rtl5Q5DTT4 599 aa15.94■□□□□ 0.14
Prdm1-201ENSMUST00000039174 DiexfQ8BTT6 772 aaKnown RBP15.92■□□□□ 0.14
Prdm1-201ENSMUST00000039174 Polr3glQ8R0C0 218 aa15.91■□□□□ 0.14
Prdm1-201ENSMUST00000039174 Mier1Q5UAK0 511 aa15.91■□□□□ 0.14
Prdm1-201ENSMUST00000039174 Npm1Q61937 292 aaKnown RBP15.91■□□□□ 0.14
Prdm1-201ENSMUST00000039174 Nlrp6Q91WS2 869 aa15.9■□□□□ 0.14
Prdm1-201ENSMUST00000039174 Plekhg3Q4VAC9 1341 aa15.86■□□□□ 0.13
Prdm1-201ENSMUST00000039174 Gm13695A2AK44 830 aa15.86■□□□□ 0.13
Prdm1-201ENSMUST00000039174 ArxO35085 564 aa15.83■□□□□ 0.13
Prdm1-201ENSMUST00000039174 Mapk8ip2Q9ERE9 830 aa15.82■□□□□ 0.12
Prdm1-201ENSMUST00000039174 Ccdc180J3QNE4 1664 aa15.81■□□□□ 0.12
Prdm1-201ENSMUST00000039174 Plppr3Q7TPB0 716 aa15.79■□□□□ 0.12
Prdm1-201ENSMUST00000039174 Anp32aO35381 247 aa15.77■□□□□ 0.11
Prdm1-201ENSMUST00000039174 Fkbp15Q6P9Q6 1216 aaKnown RBP15.75■□□□□ 0.11
Prdm1-201ENSMUST00000039174 Abcc9P70170 1546 aa15.71■□□□□ 0.11
Prdm1-201ENSMUST00000039174 ClspnQ80YR7 1315 aa15.7■□□□□ 0.1
Prdm1-201ENSMUST00000039174 Eid3Q3V124 375 aa15.69■□□□□ 0.1
Prdm1-201ENSMUST00000039174 Rangap1P46061 589 aaKnown RBP15.69■□□□□ 0.1
Prdm1-201ENSMUST00000039174 Csrnp3P59055 597 aa15.68■□□□□ 0.1
Prdm1-201ENSMUST00000039174 Gm35339A0A140LHH9 1649 aa15.67■□□□□ 0.1
Prdm1-201ENSMUST00000039174 Gm38655A0A286YDK6 273 aa15.6■□□□□ 0.09
Prdm1-201ENSMUST00000039174 CatipB9EKE5 520 aa15.59■□□□□ 0.09
Prdm1-201ENSMUST00000039174 Hdac5Q9Z2V6 1113 aa15.57■□□□□ 0.08
Prdm1-201ENSMUST00000039174 Upf2A2AT37 1269 aaKnown RBP15.51■□□□□ 0.07
Prdm1-201ENSMUST00000039174 Ythdc1E9Q5K9 736 aaKnown RBP15.49■□□□□ 0.07
Prdm1-201ENSMUST00000039174 Rad21Q61550 635 aaKnown RBP15.49■□□□□ 0.07
Prdm1-201ENSMUST00000039174 Hsp90aa1P07901 733 aaKnown RBP15.45■□□□□ 0.06
Prdm1-201ENSMUST00000039174 Ppp4r2Q0VGB7 417 aa15.42■□□□□ 0.06
Prdm1-201ENSMUST00000039174 Lmod3E9QA62 571 aa15.41■□□□□ 0.06
Prdm1-201ENSMUST00000039174 Vsig10D3YX43 558 aa15.39■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Clip1Q922J3 1391 aa15.38■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Sall2Q9QX96 1004 aa15.37■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Calr4Q3TQS0 420 aa15.37■□□□□ 0.05
Prdm1-201ENSMUST00000039174 DekQ7TNV0 380 aaKnown RBP15.37■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Safb2Q80YR5 991 aaKnown RBP15.37■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Fgd1P52734 960 aa15.36■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Chic2Q9D9G3 165 aa15.36■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Mrs2Q5NCE8 434 aa15.33■□□□□ 0.05
Prdm1-201ENSMUST00000039174 Ccer2J3QPU5 274 aa15.33■□□□□ 0.04
Prdm1-201ENSMUST00000039174 Anks4bQ8K3X6 423 aa15.31■□□□□ 0.04
Prdm1-201ENSMUST00000039174 Trim26Q99PN3 545 aa15.31■□□□□ 0.04
Prdm1-201ENSMUST00000039174 P3h3Q8CG70 732 aa15.3■□□□□ 0.04
Prdm1-201ENSMUST00000039174 Irx6Q9ER75 438 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 226.8 ms