RNA–Protein interactions for RNA: ENSMUST00000033761.12

Hcfc1-201, Transcript of Host cell factor 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Hcfc1, Length 8,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1-201ENSMUST00000033761 Rhox8Q6VSS7 320 aa15.84■□□□□ 0.13
Hcfc1-201ENSMUST00000033761 Cngb1E1AZ71 1325 aa15.02■□□□□ -0
Hcfc1-201ENSMUST00000033761 Pelp1Q9DBD5 1123 aaKnown RBP14.98□□□□□ -0.01
Hcfc1-201ENSMUST00000033761 Rpgrip1Q9EPQ2 1331 aa14.88□□□□□ -0.03
Hcfc1-201ENSMUST00000033761 Las1lA2BE28 776 aaKnown RBP14.74□□□□□ -0.05
Hcfc1-201ENSMUST00000033761 Amer1Q7TS75 1132 aa14.47□□□□□ -0.09
Hcfc1-201ENSMUST00000033761 Ehmt2Q9Z148 1263 aaKnown RBP14.28□□□□□ -0.12
Hcfc1-201ENSMUST00000033761 4930567H17RikQ3V0K5 233 aa14.25□□□□□ -0.13
Hcfc1-201ENSMUST00000033761 Wdr66E9Q743 1299 aa14.24□□□□□ -0.13
Hcfc1-201ENSMUST00000033761 Ube2uB1AUC4 352 aa14.18□□□□□ -0.14
Hcfc1-201ENSMUST00000033761 Esf1Q3V1V3 845 aaKnown RBP14.12□□□□□ -0.15
Hcfc1-201ENSMUST00000033761 Ccdc136Q3TVA9 1136 aa13.99□□□□□ -0.17
Hcfc1-201ENSMUST00000033761 Zeb1Q64318 1117 aa13.96□□□□□ -0.18
Hcfc1-201ENSMUST00000033761 CenpbP27790 599 aa13.84□□□□□ -0.19
Hcfc1-201ENSMUST00000033761 Npm2Q80W85 207 aa13.83□□□□□ -0.2
Hcfc1-201ENSMUST00000033761 Gab3Q8BSM5 595 aa13.77□□□□□ -0.21
Hcfc1-201ENSMUST00000033761 Rtl1Q7M732 1744 aa13.73□□□□□ -0.21
Hcfc1-201ENSMUST00000033761 Stra8P70278 393 aa13.72□□□□□ -0.21
Hcfc1-201ENSMUST00000033761 Myt1lP97500 1187 aa13.69□□□□□ -0.22
Hcfc1-201ENSMUST00000033761 Trim41Q5NCC3 630 aa13.62□□□□□ -0.23
Hcfc1-201ENSMUST00000033761 Ttbk1Q6PCN3 1308 aa13.62□□□□□ -0.23
Hcfc1-201ENSMUST00000033761 4933416C03RikQ3V063 378 aa13.59□□□□□ -0.23
Hcfc1-201ENSMUST00000033761 Slc24a1Q91WD8 1130 aa13.48□□□□□ -0.25
Hcfc1-201ENSMUST00000033761 Myt1Q8CFC2 1127 aa13.37□□□□□ -0.27
Hcfc1-201ENSMUST00000033761 NischQ80TM9 1593 aa13.36□□□□□ -0.27
Hcfc1-201ENSMUST00000033761 NeflP08551 543 aa13.35□□□□□ -0.27
Hcfc1-201ENSMUST00000033761 UbtfP25976 765 aaKnown RBP13.33□□□□□ -0.27
Hcfc1-201ENSMUST00000033761 Ccdc180J3QNE4 1664 aa13.27□□□□□ -0.29
Hcfc1-201ENSMUST00000033761 Anp32bQ9EST5 272 aaKnown RBP13.25□□□□□ -0.29
Hcfc1-201ENSMUST00000033761 NefmP08553 848 aa13.19□□□□□ -0.3
Hcfc1-201ENSMUST00000033761 NrdcQ8BHG1 1161 aa13.17□□□□□ -0.3
Hcfc1-201ENSMUST00000033761 Il27Q8K3I6 234 aa13.15□□□□□ -0.3
Hcfc1-201ENSMUST00000033761 Tnnt3Q9QZ47 272 aa13.12□□□□□ -0.31
Hcfc1-201ENSMUST00000033761 Rtl5Q5DTT4 599 aa13.08□□□□□ -0.32
Hcfc1-201ENSMUST00000033761 Cdk11bP24788 784 aaKnown RBP13.05□□□□□ -0.32
Hcfc1-201ENSMUST00000033761 Os9Q8K2C7 672 aa13.04□□□□□ -0.32
Hcfc1-201ENSMUST00000033761 Acin1Q9JIX8 1338 aaKnown RBP13.02□□□□□ -0.32
Hcfc1-201ENSMUST00000033761 Eif5bQ05D44 1216 aaKnown RBP13.02□□□□□ -0.32
Hcfc1-201ENSMUST00000033761 Neurod1Q60867 357 aa13.02□□□□□ -0.33
Hcfc1-201ENSMUST00000033761 HrcG5E8J6 738 aa13□□□□□ -0.33
Hcfc1-201ENSMUST00000033761 Fam50aQ9WV03 339 aaKnown RBP12.98□□□□□ -0.33
Hcfc1-201ENSMUST00000033761 Ap3b1Q9Z1T1 1105 aa12.98□□□□□ -0.33
Hcfc1-201ENSMUST00000033761 CatipB9EKE5 520 aa12.95□□□□□ -0.34
Hcfc1-201ENSMUST00000033761 NclP09405 707 aaKnown RBP12.92□□□□□ -0.34
Hcfc1-201ENSMUST00000033761 DaxxO35613 739 aa12.8□□□□□ -0.36
Hcfc1-201ENSMUST00000033761 Ythdc1E9Q5K9 736 aaKnown RBP12.8□□□□□ -0.36
Hcfc1-201ENSMUST00000033761 Gm35339A0A140LHH9 1649 aa12.79□□□□□ -0.36
Hcfc1-201ENSMUST00000033761 Nop58Q6DFW4 536 aaKnown RBP12.78□□□□□ -0.36
Hcfc1-201ENSMUST00000033761 Zcchc6Q5BLK4 1491 aaKnown RBP12.74□□□□□ -0.37
Hcfc1-201ENSMUST00000033761 Zbtb7cQ8VCZ7 619 aa12.72□□□□□ -0.37
Hcfc1-201ENSMUST00000033761 DiexfQ8BTT6 772 aaKnown RBP12.72□□□□□ -0.37
Hcfc1-201ENSMUST00000033761 Ppargc1bQ8VHJ7 1014 aa12.71□□□□□ -0.37
Hcfc1-201ENSMUST00000033761 Abcc9P70170 1546 aa12.7□□□□□ -0.38
Hcfc1-201ENSMUST00000033761 Gm13697A2AK42 830 aa12.68□□□□□ -0.38
Hcfc1-201ENSMUST00000033761 Chic1Q8CBW7 227 aa12.66□□□□□ -0.38
Hcfc1-201ENSMUST00000033761 Upf2A2AT37 1269 aaKnown RBP12.64□□□□□ -0.39
Hcfc1-201ENSMUST00000033761 TonslQ6NZL6 1363 aa12.64□□□□□ -0.39
Hcfc1-201ENSMUST00000033761 Hsp90aa1P07901 733 aaKnown RBP12.64□□□□□ -0.39
Hcfc1-201ENSMUST00000033761 Hnrnpul2Q00PI9 745 aaKnown RBP12.63□□□□□ -0.39
Hcfc1-201ENSMUST00000033761 Ifnlr1Q8CGK5 535 aa12.59□□□□□ -0.39
Hcfc1-201ENSMUST00000033761 Pcgf6Q99NA9 353 aa12.57□□□□□ -0.4
Hcfc1-201ENSMUST00000033761 Lmod3E9QA62 571 aa12.56□□□□□ -0.4
Hcfc1-201ENSMUST00000033761 Atp1b4Q99ME6 356 aa12.56□□□□□ -0.4
Hcfc1-201ENSMUST00000033761 Anp32aO35381 247 aa12.55□□□□□ -0.4
Hcfc1-201ENSMUST00000033761 Nlrp6Q91WS2 869 aa12.55□□□□□ -0.4
Hcfc1-201ENSMUST00000033761 Npm1Q61937 292 aaKnown RBP12.53□□□□□ -0.4
Hcfc1-201ENSMUST00000033761 Erich6D3Z6S9 713 aa12.51□□□□□ -0.41
Hcfc1-201ENSMUST00000033761 Polr3glQ8R0C0 218 aa12.5□□□□□ -0.41
Hcfc1-201ENSMUST00000033761 Zbtb4Q5F293 982 aa12.49□□□□□ -0.41
Hcfc1-201ENSMUST00000033761 Lmod2Q3UHZ5 550 aa12.49□□□□□ -0.41
Hcfc1-201ENSMUST00000033761 ArxO35085 564 aa12.48□□□□□ -0.41
Hcfc1-201ENSMUST00000033761 Gm13695A2AK44 830 aa12.46□□□□□ -0.41
Hcfc1-201ENSMUST00000033761 Prdm10Q3UTQ7 1184 aa12.43□□□□□ -0.42
Hcfc1-201ENSMUST00000033761 Plppr3Q7TPB0 716 aa12.43□□□□□ -0.42
Hcfc1-201ENSMUST00000033761 Mier1Q5UAK0 511 aa12.4□□□□□ -0.42
Hcfc1-201ENSMUST00000033761 Plekhg3Q4VAC9 1341 aa12.4□□□□□ -0.43
Hcfc1-201ENSMUST00000033761 Supt5hO55201 1082 aaKnown RBP12.39□□□□□ -0.43
Hcfc1-201ENSMUST00000033761 Hdac5Q9Z2V6 1113 aa12.34□□□□□ -0.43
Hcfc1-201ENSMUST00000033761 DekQ7TNV0 380 aaKnown RBP12.31□□□□□ -0.44
Hcfc1-201ENSMUST00000033761 Znf326O88291 580 aa12.31□□□□□ -0.44
Hcfc1-201ENSMUST00000033761 Trim44Q9QXA7 346 aa12.3□□□□□ -0.44
Hcfc1-201ENSMUST00000033761 Fkbp15Q6P9Q6 1216 aaKnown RBP12.29□□□□□ -0.44
Hcfc1-201ENSMUST00000033761 Mapk8ip2Q9ERE9 830 aa12.24□□□□□ -0.45
Hcfc1-201ENSMUST00000033761 Rangap1P46061 589 aaKnown RBP12.23□□□□□ -0.45
Hcfc1-201ENSMUST00000033761 ClspnQ80YR7 1315 aa12.23□□□□□ -0.45
Hcfc1-201ENSMUST00000033761 Ccdc9Q8VC31 543 aaKnown RBP12.19□□□□□ -0.46
Hcfc1-201ENSMUST00000033761 Vsig10D3YX43 558 aa12.19□□□□□ -0.46
Hcfc1-201ENSMUST00000033761 Csrnp3P59055 597 aa12.15□□□□□ -0.46
Hcfc1-201ENSMUST00000033761 Eid3Q3V124 375 aa12.14□□□□□ -0.47
Hcfc1-201ENSMUST00000033761 PtmaP26350 111 aa12.13□□□□□ -0.47
Hcfc1-201ENSMUST00000033761 Adam1bQ8R534 806 aa12.13□□□□□ -0.47
Hcfc1-201ENSMUST00000033761 Fgd1P52734 960 aa12.13□□□□□ -0.47
Hcfc1-201ENSMUST00000033761 Safb2Q80YR5 991 aaKnown RBP12.13□□□□□ -0.47
Hcfc1-201ENSMUST00000033761 PnnO35691 725 aaKnown RBP12.09□□□□□ -0.47
Hcfc1-201ENSMUST00000033761 Clip1Q922J3 1391 aa12.08□□□□□ -0.48
Hcfc1-201ENSMUST00000033761 Ppp4r2Q0VGB7 417 aa12.06□□□□□ -0.48
Hcfc1-201ENSMUST00000033761 P3h3Q8CG70 732 aa12.05□□□□□ -0.48
Hcfc1-201ENSMUST00000033761 Ubl4bQ9CQ84 188 aa12.04□□□□□ -0.48
Hcfc1-201ENSMUST00000033761 Rad21Q61550 635 aaKnown RBP12.03□□□□□ -0.48
Hcfc1-201ENSMUST00000033761 Znf316Q6PGE4 1016 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 90.7 ms