RNA–Protein interactions for RNA: ENSMUST00000027554.7

Cln8-201, Transcript of Protein CLN8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln8, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8-201ENSMUST00000027554 Rhox8Q6VSS7 320 aa19.39■□□□□ 0.69
Cln8-201ENSMUST00000027554 Ehmt2Q9Z148 1263 aaKnown RBP17.62■□□□□ 0.41
Cln8-201ENSMUST00000027554 Ube2uB1AUC4 352 aa17.24■□□□□ 0.35
Cln8-201ENSMUST00000027554 Esf1Q3V1V3 845 aaKnown RBP17.21■□□□□ 0.35
Cln8-201ENSMUST00000027554 Ccdc136Q3TVA9 1136 aa17.16■□□□□ 0.34
Cln8-201ENSMUST00000027554 Cngb1E1AZ71 1325 aa17.15■□□□□ 0.34
Cln8-201ENSMUST00000027554 Wdr66E9Q743 1299 aa17.1■□□□□ 0.33
Cln8-201ENSMUST00000027554 Zeb1Q64318 1117 aa17.07■□□□□ 0.32
Cln8-201ENSMUST00000027554 Gab3Q8BSM5 595 aa16.94■□□□□ 0.3
Cln8-201ENSMUST00000027554 Las1lA2BE28 776 aaKnown RBP16.82■□□□□ 0.28
Cln8-201ENSMUST00000027554 Npm2Q80W85 207 aa16.82■□□□□ 0.28
Cln8-201ENSMUST00000027554 Myt1lP97500 1187 aa16.75■□□□□ 0.27
Cln8-201ENSMUST00000027554 Rpgrip1Q9EPQ2 1331 aa16.7■□□□□ 0.26
Cln8-201ENSMUST00000027554 Pelp1Q9DBD5 1123 aaKnown RBP16.67■□□□□ 0.26
Cln8-201ENSMUST00000027554 Amer1Q7TS75 1132 aa16.49■□□□□ 0.23
Cln8-201ENSMUST00000027554 Slc24a1Q91WD8 1130 aa16.41■□□□□ 0.22
Cln8-201ENSMUST00000027554 Trim41Q5NCC3 630 aa16.35■□□□□ 0.21
Cln8-201ENSMUST00000027554 Il27Q8K3I6 234 aa16.28■□□□□ 0.2
Cln8-201ENSMUST00000027554 UbtfP25976 765 aaKnown RBP16.19■□□□□ 0.18
Cln8-201ENSMUST00000027554 Ttbk1Q6PCN3 1308 aa16■□□□□ 0.15
Cln8-201ENSMUST00000027554 Ap3b1Q9Z1T1 1105 aa15.97■□□□□ 0.15
Cln8-201ENSMUST00000027554 Neurod1Q60867 357 aa15.94■□□□□ 0.14
Cln8-201ENSMUST00000027554 Os9Q8K2C7 672 aa15.87■□□□□ 0.13
Cln8-201ENSMUST00000027554 CenpbP27790 599 aa15.86■□□□□ 0.13
Cln8-201ENSMUST00000027554 Fam50aQ9WV03 339 aaKnown RBP15.79■□□□□ 0.12
Cln8-201ENSMUST00000027554 Ppargc1bQ8VHJ7 1014 aa15.76■□□□□ 0.11
Cln8-201ENSMUST00000027554 Zbtb7cQ8VCZ7 619 aa15.76■□□□□ 0.11
Cln8-201ENSMUST00000027554 Eif5bQ05D44 1216 aaKnown RBP15.75■□□□□ 0.11
Cln8-201ENSMUST00000027554 Ifnlr1Q8CGK5 535 aa15.73■□□□□ 0.11
Cln8-201ENSMUST00000027554 Stra8P70278 393 aa15.72■□□□□ 0.11
Cln8-201ENSMUST00000027554 4930567H17RikQ3V0K5 233 aa15.72■□□□□ 0.11
Cln8-201ENSMUST00000027554 NischQ80TM9 1593 aa15.71■□□□□ 0.1
Cln8-201ENSMUST00000027554 4933416C03RikQ3V063 378 aa15.7■□□□□ 0.1
Cln8-201ENSMUST00000027554 HrcG5E8J6 738 aa15.64■□□□□ 0.09
Cln8-201ENSMUST00000027554 Plppr3Q7TPB0 716 aa15.64■□□□□ 0.09
Cln8-201ENSMUST00000027554 Chic1Q8CBW7 227 aa15.63■□□□□ 0.09
Cln8-201ENSMUST00000027554 NrdcQ8BHG1 1161 aa15.62■□□□□ 0.09
Cln8-201ENSMUST00000027554 Gm35339A0A140LHH9 1649 aa15.58■□□□□ 0.09
Cln8-201ENSMUST00000027554 NefmP08553 848 aa15.58■□□□□ 0.08
Cln8-201ENSMUST00000027554 NclP09405 707 aaKnown RBP15.56■□□□□ 0.08
Cln8-201ENSMUST00000027554 Gm13697A2AK42 830 aa15.55■□□□□ 0.08
Cln8-201ENSMUST00000027554 Anp32bQ9EST5 272 aaKnown RBP15.54■□□□□ 0.08
Cln8-201ENSMUST00000027554 Abcc9P70170 1546 aa15.53■□□□□ 0.08
Cln8-201ENSMUST00000027554 NeflP08551 543 aa15.52■□□□□ 0.07
Cln8-201ENSMUST00000027554 Hnrnpul2Q00PI9 745 aaKnown RBP15.47■□□□□ 0.07
Cln8-201ENSMUST00000027554 Acin1Q9JIX8 1338 aaKnown RBP15.46■□□□□ 0.06
Cln8-201ENSMUST00000027554 Zbtb4Q5F293 982 aa15.46■□□□□ 0.06
Cln8-201ENSMUST00000027554 Cdk11bP24788 784 aaKnown RBP15.44■□□□□ 0.06
Cln8-201ENSMUST00000027554 Zcchc6Q5BLK4 1491 aaKnown RBP15.39■□□□□ 0.05
Cln8-201ENSMUST00000027554 Prdm10Q3UTQ7 1184 aa15.39■□□□□ 0.05
Cln8-201ENSMUST00000027554 Lmod2Q3UHZ5 550 aa15.38■□□□□ 0.05
Cln8-201ENSMUST00000027554 Atp1b4Q99ME6 356 aa15.37■□□□□ 0.05
Cln8-201ENSMUST00000027554 Erich6D3Z6S9 713 aa15.32■□□□□ 0.04
Cln8-201ENSMUST00000027554 Fkbp15Q6P9Q6 1216 aaKnown RBP15.31■□□□□ 0.04
Cln8-201ENSMUST00000027554 Npm1Q61937 292 aaKnown RBP15.27■□□□□ 0.04
Cln8-201ENSMUST00000027554 Nop58Q6DFW4 536 aaKnown RBP15.26■□□□□ 0.03
Cln8-201ENSMUST00000027554 Gm13695A2AK44 830 aa15.23■□□□□ 0.03
Cln8-201ENSMUST00000027554 Polr3glQ8R0C0 218 aa15.18■□□□□ 0.02
Cln8-201ENSMUST00000027554 ArxO35085 564 aa15.16■□□□□ 0.02
Cln8-201ENSMUST00000027554 Plekhg3Q4VAC9 1341 aa15.12■□□□□ 0.01
Cln8-201ENSMUST00000027554 Rangap1P46061 589 aaKnown RBP15.11■□□□□ 0.01
Cln8-201ENSMUST00000027554 Tnnt3Q9QZ47 272 aa15.1■□□□□ 0.01
Cln8-201ENSMUST00000027554 Mapk8ip2Q9ERE9 830 aa15.08■□□□□ 0
Cln8-201ENSMUST00000027554 TonslQ6NZL6 1363 aa15.08■□□□□ 0
Cln8-201ENSMUST00000027554 Pcgf6Q99NA9 353 aa15.06■□□□□ 0
Cln8-201ENSMUST00000027554 Nlrp6Q91WS2 869 aa15.05■□□□□ 0
Cln8-201ENSMUST00000027554 DiexfQ8BTT6 772 aaKnown RBP15.02■□□□□ -0
Cln8-201ENSMUST00000027554 Supt5hO55201 1082 aaKnown RBP14.97□□□□□ -0.01
Cln8-201ENSMUST00000027554 DaxxO35613 739 aa14.97□□□□□ -0.01
Cln8-201ENSMUST00000027554 Myt1Q8CFC2 1127 aa14.95□□□□□ -0.02
Cln8-201ENSMUST00000027554 Mier1Q5UAK0 511 aa14.92□□□□□ -0.02
Cln8-201ENSMUST00000027554 Csrnp3P59055 597 aa14.91□□□□□ -0.02
Cln8-201ENSMUST00000027554 Safb2Q80YR5 991 aaKnown RBP14.88□□□□□ -0.03
Cln8-201ENSMUST00000027554 Eid3Q3V124 375 aa14.87□□□□□ -0.03
Cln8-201ENSMUST00000027554 Gm38655A0A286YDK6 273 aa14.82□□□□□ -0.04
Cln8-201ENSMUST00000027554 Ccdc180J3QNE4 1664 aa14.82□□□□□ -0.04
Cln8-201ENSMUST00000027554 Ythdc1E9Q5K9 736 aaKnown RBP14.8□□□□□ -0.04
Cln8-201ENSMUST00000027554 P3h3Q8CG70 732 aa14.79□□□□□ -0.04
Cln8-201ENSMUST00000027554 Ubl4bQ9CQ84 188 aa14.76□□□□□ -0.05
Cln8-201ENSMUST00000027554 CatipB9EKE5 520 aa14.74□□□□□ -0.05
Cln8-201ENSMUST00000027554 Irx6Q9ER75 438 aa14.71□□□□□ -0.05
Cln8-201ENSMUST00000027554 Chic2Q9D9G3 165 aa14.69□□□□□ -0.06
Cln8-201ENSMUST00000027554 Vsig10D3YX43 558 aa14.68□□□□□ -0.06
Cln8-201ENSMUST00000027554 Rad21Q61550 635 aaKnown RBP14.68□□□□□ -0.06
Cln8-201ENSMUST00000027554 Lmod3E9QA62 571 aa14.64□□□□□ -0.07
Cln8-201ENSMUST00000027554 Trim26Q99PN3 545 aa14.61□□□□□ -0.07
Cln8-201ENSMUST00000027554 Anp32aO35381 247 aa14.58□□□□□ -0.08
Cln8-201ENSMUST00000027554 Rtl5Q5DTT4 599 aa14.58□□□□□ -0.08
Cln8-201ENSMUST00000027554 Hsp90aa1P07901 733 aaKnown RBP14.58□□□□□ -0.08
Cln8-201ENSMUST00000027554 MyclP10166 368 aa14.56□□□□□ -0.08
Cln8-201ENSMUST00000027554 Upf2A2AT37 1269 aaKnown RBP14.53□□□□□ -0.08
Cln8-201ENSMUST00000027554 Clip1Q922J3 1391 aa14.52□□□□□ -0.09
Cln8-201ENSMUST00000027554 ClspnQ80YR7 1315 aa14.51□□□□□ -0.09
Cln8-201ENSMUST00000027554 DekQ7TNV0 380 aaKnown RBP14.51□□□□□ -0.09
Cln8-201ENSMUST00000027554 Fgd1P52734 960 aa14.5□□□□□ -0.09
Cln8-201ENSMUST00000027554 Rtn4Q99P72 1162 aaKnown RBP14.5□□□□□ -0.09
Cln8-201ENSMUST00000027554 Arid4bA2CG63 1314 aaKnown RBP14.46□□□□□ -0.1
Cln8-201ENSMUST00000027554 NgefQ8CHT1 710 aa14.45□□□□□ -0.1
Cln8-201ENSMUST00000027554 Hdac5Q9Z2V6 1113 aa14.45□□□□□ -0.1
Cln8-201ENSMUST00000027554 Znf326O88291 580 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 442 ms