RNA–Protein interactions for RNA: ENSMUST00000023580.6

Usp25-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp25, Length 4,412 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25-201ENSMUST00000023580 Gm35339A0A140LHH9 1649 aa13.12□□□□□ -0.31
Usp25-201ENSMUST00000023580 NischQ80TM9 1593 aa12.62□□□□□ -0.39
Usp25-201ENSMUST00000023580 Abcc8B2RUS7 1588 aa12.35□□□□□ -0.43
Usp25-201ENSMUST00000023580 Abcc9P70170 1546 aa12.32□□□□□ -0.44
Usp25-201ENSMUST00000023580 ScribQ80U72 1612 aa12.14□□□□□ -0.47
Usp25-201ENSMUST00000023580 Kdm5dQ62240 1548 aa11.52□□□□□ -0.57
Usp25-201ENSMUST00000023580 NacadQ5SWP3 1504 aa11.38□□□□□ -0.59
Usp25-201ENSMUST00000023580 Dcaf1Q80TR8 1506 aa11.37□□□□□ -0.59
Usp25-201ENSMUST00000023580 BicraF8VPZ9 1578 aa11.33□□□□□ -0.6
Usp25-201ENSMUST00000023580 Sycp2Q9CUU3 1500 aa11.27□□□□□ -0.61
Usp25-201ENSMUST00000023580 Dnajc5bQ9CQ94 199 aa11□□□□□ -0.65
Usp25-201ENSMUST00000023580 Rb1cc1Q9ESK9 1588 aa10.99□□□□□ -0.65
Usp25-201ENSMUST00000023580 Ccdc180J3QNE4 1664 aa10.94□□□□□ -0.66
Usp25-201ENSMUST00000023580 Thoc2B1AZI6 1594 aaKnown RBP10.86□□□□□ -0.67
Usp25-201ENSMUST00000023580 Baz1aO88379 1555 aa10.83□□□□□ -0.68
Usp25-201ENSMUST00000023580 Crybg2B7ZCC2 1516 aa10.79□□□□□ -0.68
Usp25-201ENSMUST00000023580 Cecr2E9Q2Z1 1453 aa10.63□□□□□ -0.71
Usp25-201ENSMUST00000023580 Smarca2Q6DIC0 1577 aa10.62□□□□□ -0.71
Usp25-201ENSMUST00000023580 Unc13aQ4KUS2 1712 aa10.59□□□□□ -0.71
Usp25-201ENSMUST00000023580 Pds5bQ4VA53 1446 aaKnown RBP10.56□□□□□ -0.72
Usp25-201ENSMUST00000023580 Cc2d2aQ8CFW7 1633 aa10.56□□□□□ -0.72
Usp25-201ENSMUST00000023580 Atad2bE9Q166 1460 aaKnown RBP10.55□□□□□ -0.72
Usp25-201ENSMUST00000023580 Smarca4Q3TKT4 1613 aaKnown RBP10.53□□□□□ -0.72
Usp25-201ENSMUST00000023580 Iqgap2Q3UQ44 1575 aa10.5□□□□□ -0.73
Usp25-201ENSMUST00000023580 Fam135aQ6NS59 1506 aa10.5□□□□□ -0.73
Usp25-201ENSMUST00000023580 Wdr62Q3U3T8 1523 aa10.47□□□□□ -0.73
Usp25-201ENSMUST00000023580 Frmpd1A2AKB4 1549 aa10.46□□□□□ -0.74
Usp25-201ENSMUST00000023580 Zcchc6Q5BLK4 1491 aaKnown RBP10.45□□□□□ -0.74
Usp25-201ENSMUST00000023580 Synj1Q8CHC4 1574 aa10.31□□□□□ -0.76
Usp25-201ENSMUST00000023580 Rtl1Q7M732 1744 aa10.28□□□□□ -0.76
Usp25-201ENSMUST00000023580 Rhox8Q6VSS7 320 aa10.25□□□□□ -0.77
Usp25-201ENSMUST00000023580 CftrP26361 1476 aa10.25□□□□□ -0.77
Usp25-201ENSMUST00000023580 Ercc6F8VPZ5 1481 aa10.24□□□□□ -0.77
Usp25-201ENSMUST00000023580 Cttnbp2B9EJA2 1648 aa10.23□□□□□ -0.77
Usp25-201ENSMUST00000023580 Phldb1Q6PDH0 1371 aaKnown RBP10.16□□□□□ -0.78
Usp25-201ENSMUST00000023580 Baz1bQ9Z277 1479 aa10.12□□□□□ -0.79
Usp25-201ENSMUST00000023580 Mrc2Q64449 1479 aa10.06□□□□□ -0.8
Usp25-201ENSMUST00000023580 Lrriq1Q0P5X1 1673 aa10.06□□□□□ -0.8
Usp25-201ENSMUST00000023580 Kif21aQ9QXL2 1672 aa10.04□□□□□ -0.8
Usp25-201ENSMUST00000023580 Lamc3Q9R0B6 1581 aa10.01□□□□□ -0.81
Usp25-201ENSMUST00000023580 TnnQ80Z71 1560 aa9.99□□□□□ -0.81
Usp25-201ENSMUST00000023580 Top2bQ64511 1612 aa9.98□□□□□ -0.81
Usp25-201ENSMUST00000023580 Brd4Q9ESU6 1400 aaKnown RBP9.95□□□□□ -0.82
Usp25-201ENSMUST00000023580 Ubl4bQ9CQ84 188 aa9.92□□□□□ -0.82
Usp25-201ENSMUST00000023580 Setd1bQ8CFT2 1985 aa9.91□□□□□ -0.82
Usp25-201ENSMUST00000023580 Eif4g3Q80XI3 1579 aaKnown RBP9.85□□□□□ -0.83
Usp25-201ENSMUST00000023580 Cux2P70298 1426 aa9.85□□□□□ -0.83
Usp25-201ENSMUST00000023580 Ccdc136Q3TVA9 1136 aa9.81□□□□□ -0.84
Usp25-201ENSMUST00000023580 Urb2E9Q7L1 1524 aaKnown RBP9.8□□□□□ -0.84
Usp25-201ENSMUST00000023580 Camsap1A2AHC3 1581 aa9.8□□□□□ -0.84
Usp25-201ENSMUST00000023580 Kif15Q6P9L6 1387 aa9.77□□□□□ -0.85
Usp25-201ENSMUST00000023580 Rsf1E9PWW9 1441 aaKnown RBP9.75□□□□□ -0.85
Usp25-201ENSMUST00000023580 Plb1Q3TTY0 1478 aa9.72□□□□□ -0.85
Usp25-201ENSMUST00000023580 Dnajc5P60904 198 aa9.7□□□□□ -0.86
Usp25-201ENSMUST00000023580 Shroom2A2ALU4 1481 aa9.7□□□□□ -0.86
Usp25-201ENSMUST00000023580 Golga3P55937 1487 aa9.69□□□□□ -0.86
Usp25-201ENSMUST00000023580 Samd9lQ69Z37 1561 aa9.69□□□□□ -0.86
Usp25-201ENSMUST00000023580 Crocc2F6XLV1 1638 aa9.69□□□□□ -0.86
Usp25-201ENSMUST00000023580 Gpatch8A2A6A1 1505 aa9.67□□□□□ -0.86
Usp25-201ENSMUST00000023580 Rusc2Q80U22 1514 aa9.64□□□□□ -0.87
Usp25-201ENSMUST00000023580 Dhx29Q6PGC1 1365 aaKnown RBP9.64□□□□□ -0.87
Usp25-201ENSMUST00000023580 PogzQ8BZH4 1409 aaKnown RBP9.63□□□□□ -0.87
Usp25-201ENSMUST00000023580 Col17a1Q07563 1470 aa9.63□□□□□ -0.87
Usp25-201ENSMUST00000023580 Disp1Q3TDN0 1521 aa9.63□□□□□ -0.87
Usp25-201ENSMUST00000023580 Grin2bQ01097 1482 aa9.61□□□□□ -0.87
Usp25-201ENSMUST00000023580 LrpprcQ6PB66 1392 aaKnown RBP9.61□□□□□ -0.87
Usp25-201ENSMUST00000023580 Ccdc88bQ4QRL3 1481 aa9.59□□□□□ -0.87
Usp25-201ENSMUST00000023580 Fmn1Q05860 1466 aa9.59□□□□□ -0.87
Usp25-201ENSMUST00000023580 Duox2A2AQ99 1517 aa9.59□□□□□ -0.87
Usp25-201ENSMUST00000023580 Magi3Q9EQJ9 1476 aa9.58□□□□□ -0.88
Usp25-201ENSMUST00000023580 Nup160Q9Z0W3 1402 aaKnown RBP9.57□□□□□ -0.88
Usp25-201ENSMUST00000023580 PtprkP35822 1457 aa9.57□□□□□ -0.88
Usp25-201ENSMUST00000023580 Top2aQ01320 1528 aaKnown RBP9.56□□□□□ -0.88
Usp25-201ENSMUST00000023580 Cep164Q5DU05 1446 aa9.54□□□□□ -0.88
Usp25-201ENSMUST00000023580 Zcchc11B2RX14 1644 aaKnown RBP9.52□□□□□ -0.89
Usp25-201ENSMUST00000023580 Trim41Q5NCC3 630 aa9.52□□□□□ -0.89
Usp25-201ENSMUST00000023580 Pbrm1Q8BSQ9 1634 aaKnown RBP9.52□□□□□ -0.89
Usp25-201ENSMUST00000023580 Ift140E9PY46 1464 aa9.5□□□□□ -0.89
Usp25-201ENSMUST00000023580 Ccdc18Q640L5 1455 aa9.5□□□□□ -0.89
Usp25-201ENSMUST00000023580 Esf1Q3V1V3 845 aaKnown RBP9.49□□□□□ -0.89
Usp25-201ENSMUST00000023580 Pla2r1Q62028 1487 aa9.48□□□□□ -0.89
Usp25-201ENSMUST00000023580 Abcc2Q8VI47 1543 aa9.47□□□□□ -0.89
Usp25-201ENSMUST00000023580 Rad54l2Q99NG0 1466 aa9.47□□□□□ -0.89
Usp25-201ENSMUST00000023580 Chd1P40201 1711 aa9.46□□□□□ -0.89
Usp25-201ENSMUST00000023580 Abca16E9PWJ7 1678 aa9.46□□□□□ -0.9
Usp25-201ENSMUST00000023580 BC005561E9Q5E2 1589 aa9.46□□□□□ -0.9
Usp25-201ENSMUST00000023580 Grin2aP35436 1464 aa9.45□□□□□ -0.9
Usp25-201ENSMUST00000023580 Eif4g1Q6NZJ6 1600 aaKnown RBP9.44□□□□□ -0.9
Usp25-201ENSMUST00000023580 NrkQ9R0G8 1455 aa9.44□□□□□ -0.9
Usp25-201ENSMUST00000023580 Dnmt1P13864 1620 aaKnown RBP9.44□□□□□ -0.9
Usp25-201ENSMUST00000023580 Npm1Q61937 292 aaKnown RBP9.43□□□□□ -0.9
Usp25-201ENSMUST00000023580 Pprc1Q6NZN1 1644 aa9.43□□□□□ -0.9
Usp25-201ENSMUST00000023580 Efcab5A0JP43 1406 aa9.43□□□□□ -0.9
Usp25-201ENSMUST00000023580 Chic1Q8CBW7 227 aa9.4□□□□□ -0.9
Usp25-201ENSMUST00000023580 Shroom4Q1W617 1475 aa9.4□□□□□ -0.91
Usp25-201ENSMUST00000023580 SynmQ70IV5 1561 aa9.39□□□□□ -0.91
Usp25-201ENSMUST00000023580 AqrQ8CFQ3 1481 aaKnown RBP9.39□□□□□ -0.91
Usp25-201ENSMUST00000023580 Adamts12Q811B3 1600 aa9.38□□□□□ -0.91
Usp25-201ENSMUST00000023580 PxdnQ3UQ28 1475 aa9.36□□□□□ -0.91
Usp25-201ENSMUST00000023580 WizO88286 1684 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms