RNA–Protein interactions for RNA: ENSMUST00000020649.13

Rad50-201, Transcript of DNA repair protein RAD50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rad50, Length 5,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50-201ENSMUST00000020649 Rhox8Q6VSS7 320 aa19.07■□□□□ 0.64
Rad50-201ENSMUST00000020649 NischQ80TM9 1593 aa18.28■□□□□ 0.52
Rad50-201ENSMUST00000020649 Abcc9P70170 1546 aa17.27■□□□□ 0.35
Rad50-201ENSMUST00000020649 Ccdc136Q3TVA9 1136 aa17.22■□□□□ 0.35
Rad50-201ENSMUST00000020649 Abcc8B2RUS7 1588 aa16.97■□□□□ 0.31
Rad50-201ENSMUST00000020649 Esf1Q3V1V3 845 aaKnown RBP16.94■□□□□ 0.3
Rad50-201ENSMUST00000020649 Cngb1E1AZ71 1325 aa16.9■□□□□ 0.3
Rad50-201ENSMUST00000020649 Trim41Q5NCC3 630 aa16.9■□□□□ 0.3
Rad50-201ENSMUST00000020649 Gm35339A0A140LHH9 1649 aa16.77■□□□□ 0.28
Rad50-201ENSMUST00000020649 Ehmt2Q9Z148 1263 aaKnown RBP16.66■□□□□ 0.26
Rad50-201ENSMUST00000020649 Rpgrip1Q9EPQ2 1331 aa16.56■□□□□ 0.24
Rad50-201ENSMUST00000020649 Gab3Q8BSM5 595 aa16.55■□□□□ 0.24
Rad50-201ENSMUST00000020649 Rtl1Q7M732 1744 aa16.52■□□□□ 0.23
Rad50-201ENSMUST00000020649 Zcchc6Q5BLK4 1491 aaKnown RBP16.49■□□□□ 0.23
Rad50-201ENSMUST00000020649 Ccdc180J3QNE4 1664 aa16.49■□□□□ 0.23
Rad50-201ENSMUST00000020649 Npm2Q80W85 207 aa16.39■□□□□ 0.21
Rad50-201ENSMUST00000020649 Zeb1Q64318 1117 aa16.35■□□□□ 0.21
Rad50-201ENSMUST00000020649 Myt1lP97500 1187 aa16.24■□□□□ 0.19
Rad50-201ENSMUST00000020649 HrcG5E8J6 738 aa16.22■□□□□ 0.19
Rad50-201ENSMUST00000020649 Rb1cc1Q9ESK9 1588 aa16.06■□□□□ 0.16
Rad50-201ENSMUST00000020649 Il27Q8K3I6 234 aa16.03■□□□□ 0.16
Rad50-201ENSMUST00000020649 NacadQ5SWP3 1504 aa15.96■□□□□ 0.15
Rad50-201ENSMUST00000020649 Ube2uB1AUC4 352 aa15.95■□□□□ 0.14
Rad50-201ENSMUST00000020649 Las1lA2BE28 776 aaKnown RBP15.94■□□□□ 0.14
Rad50-201ENSMUST00000020649 Wdr66E9Q743 1299 aa15.85■□□□□ 0.13
Rad50-201ENSMUST00000020649 Acin1Q9JIX8 1338 aaKnown RBP15.82■□□□□ 0.12
Rad50-201ENSMUST00000020649 UbtfP25976 765 aaKnown RBP15.82■□□□□ 0.12
Rad50-201ENSMUST00000020649 Brd4Q9ESU6 1400 aaKnown RBP15.79■□□□□ 0.12
Rad50-201ENSMUST00000020649 Baz1aO88379 1555 aa15.73■□□□□ 0.11
Rad50-201ENSMUST00000020649 Kdm5dQ62240 1548 aa15.72■□□□□ 0.11
Rad50-201ENSMUST00000020649 Dcaf1Q80TR8 1506 aa15.71■□□□□ 0.11
Rad50-201ENSMUST00000020649 NefmP08553 848 aa15.64■□□□□ 0.1
Rad50-201ENSMUST00000020649 Ap3b1Q9Z1T1 1105 aa15.6■□□□□ 0.09
Rad50-201ENSMUST00000020649 Npm1Q61937 292 aaKnown RBP15.59■□□□□ 0.09
Rad50-201ENSMUST00000020649 Chic1Q8CBW7 227 aa15.46■□□□□ 0.07
Rad50-201ENSMUST00000020649 Cep164Q5DU05 1446 aa15.44■□□□□ 0.06
Rad50-201ENSMUST00000020649 Fam50aQ9WV03 339 aaKnown RBP15.38■□□□□ 0.05
Rad50-201ENSMUST00000020649 Ubl4bQ9CQ84 188 aa15.36■□□□□ 0.05
Rad50-201ENSMUST00000020649 ScribQ80U72 1612 aa15.36■□□□□ 0.05
Rad50-201ENSMUST00000020649 Sycp2Q9CUU3 1500 aa15.33■□□□□ 0.04
Rad50-201ENSMUST00000020649 Golga3P55937 1487 aa15.27■□□□□ 0.04
Rad50-201ENSMUST00000020649 Plekhg3Q4VAC9 1341 aa15.24■□□□□ 0.03
Rad50-201ENSMUST00000020649 Mier1Q5UAK0 511 aa15.23■□□□□ 0.03
Rad50-201ENSMUST00000020649 Lmod2Q3UHZ5 550 aa15.22■□□□□ 0.03
Rad50-201ENSMUST00000020649 Ercc6F8VPZ5 1481 aa15.22■□□□□ 0.03
Rad50-201ENSMUST00000020649 Crybg2B7ZCC2 1516 aa15.19■□□□□ 0.02
Rad50-201ENSMUST00000020649 Clip1Q922J3 1391 aa15.15■□□□□ 0.02
Rad50-201ENSMUST00000020649 Rsf1E9PWW9 1441 aaKnown RBP15.15■□□□□ 0.02
Rad50-201ENSMUST00000020649 Kif15Q6P9L6 1387 aa15.13■□□□□ 0.01
Rad50-201ENSMUST00000020649 Pds5bQ4VA53 1446 aaKnown RBP15.12■□□□□ 0.01
Rad50-201ENSMUST00000020649 TonslQ6NZL6 1363 aa15.09■□□□□ 0.01
Rad50-201ENSMUST00000020649 NclP09405 707 aaKnown RBP15.08■□□□□ 0
Rad50-201ENSMUST00000020649 Neurod1Q60867 357 aa15.07■□□□□ 0
Rad50-201ENSMUST00000020649 Stra8P70278 393 aa15.02■□□□□ -0
Rad50-201ENSMUST00000020649 Smarca2Q6DIC0 1577 aa15.01□□□□□ -0.01
Rad50-201ENSMUST00000020649 Pcgf6Q99NA9 353 aa15.01□□□□□ -0.01
Rad50-201ENSMUST00000020649 Slc24a1Q91WD8 1130 aa15□□□□□ -0.01
Rad50-201ENSMUST00000020649 Ccdc18Q640L5 1455 aa14.99□□□□□ -0.01
Rad50-201ENSMUST00000020649 Cecr2E9Q2Z1 1453 aa14.98□□□□□ -0.01
Rad50-201ENSMUST00000020649 Pelp1Q9DBD5 1123 aaKnown RBP14.96□□□□□ -0.01
Rad50-201ENSMUST00000020649 Ifnlr1Q8CGK5 535 aa14.94□□□□□ -0.02
Rad50-201ENSMUST00000020649 CftrP26361 1476 aa14.92□□□□□ -0.02
Rad50-201ENSMUST00000020649 Ppargc1bQ8VHJ7 1014 aa14.92□□□□□ -0.02
Rad50-201ENSMUST00000020649 Fkbp15Q6P9Q6 1216 aaKnown RBP14.92□□□□□ -0.02
Rad50-201ENSMUST00000020649 Zbtb7cQ8VCZ7 619 aa14.9□□□□□ -0.02
Rad50-201ENSMUST00000020649 Cdk11bP24788 784 aaKnown RBP14.9□□□□□ -0.02
Rad50-201ENSMUST00000020649 Supt5hO55201 1082 aaKnown RBP14.89□□□□□ -0.03
Rad50-201ENSMUST00000020649 Os9Q8K2C7 672 aa14.89□□□□□ -0.03
Rad50-201ENSMUST00000020649 Setd5Q5XJV7 1441 aa14.88□□□□□ -0.03
Rad50-201ENSMUST00000020649 Ccdc88bQ4QRL3 1481 aa14.87□□□□□ -0.03
Rad50-201ENSMUST00000020649 Fmn1Q05860 1466 aa14.85□□□□□ -0.03
Rad50-201ENSMUST00000020649 Synj1Q8CHC4 1574 aa14.85□□□□□ -0.03
Rad50-201ENSMUST00000020649 Atad2bE9Q166 1460 aaKnown RBP14.84□□□□□ -0.03
Rad50-201ENSMUST00000020649 BlmO88700 1416 aa14.84□□□□□ -0.03
Rad50-201ENSMUST00000020649 Smarca4Q3TKT4 1613 aaKnown RBP14.83□□□□□ -0.03
Rad50-201ENSMUST00000020649 Hnrnpul2Q00PI9 745 aaKnown RBP14.82□□□□□ -0.04
Rad50-201ENSMUST00000020649 Nop58Q6DFW4 536 aaKnown RBP14.81□□□□□ -0.04
Rad50-201ENSMUST00000020649 Anp32bQ9EST5 272 aaKnown RBP14.79□□□□□ -0.04
Rad50-201ENSMUST00000020649 Eid3Q3V124 375 aa14.79□□□□□ -0.04
Rad50-201ENSMUST00000020649 NrdcQ8BHG1 1161 aa14.79□□□□□ -0.04
Rad50-201ENSMUST00000020649 Eea1Q8BL66 1411 aa14.75□□□□□ -0.05
Rad50-201ENSMUST00000020649 Ccer2J3QPU5 274 aa14.73□□□□□ -0.05
Rad50-201ENSMUST00000020649 Cttnbp2B9EJA2 1648 aa14.72□□□□□ -0.05
Rad50-201ENSMUST00000020649 Chic2Q9D9G3 165 aa14.71□□□□□ -0.06
Rad50-201ENSMUST00000020649 ClspnQ80YR7 1315 aa14.71□□□□□ -0.06
Rad50-201ENSMUST00000020649 Phldb1Q6PDH0 1371 aaKnown RBP14.69□□□□□ -0.06
Rad50-201ENSMUST00000020649 Cep162Q6ZQ06 1403 aa14.66□□□□□ -0.06
Rad50-201ENSMUST00000020649 Iqgap2Q3UQ44 1575 aa14.66□□□□□ -0.06
Rad50-201ENSMUST00000020649 Erich6D3Z6S9 713 aa14.65□□□□□ -0.06
Rad50-201ENSMUST00000020649 Cux2P70298 1426 aa14.65□□□□□ -0.06
Rad50-201ENSMUST00000020649 Arhgap27A2AB59 869 aa14.65□□□□□ -0.06
Rad50-201ENSMUST00000020649 CenpbP27790 599 aa14.63□□□□□ -0.07
Rad50-201ENSMUST00000020649 Gm13697A2AK42 830 aa14.62□□□□□ -0.07
Rad50-201ENSMUST00000020649 Tnnt3Q9QZ47 272 aa14.6□□□□□ -0.07
Rad50-201ENSMUST00000020649 Hdac5Q9Z2V6 1113 aa14.59□□□□□ -0.07
Rad50-201ENSMUST00000020649 Eif5bQ05D44 1216 aaKnown RBP14.56□□□□□ -0.08
Rad50-201ENSMUST00000020649 Zbtb4Q5F293 982 aa14.54□□□□□ -0.08
Rad50-201ENSMUST00000020649 Ttbk1Q6PCN3 1308 aa14.54□□□□□ -0.08
Rad50-201ENSMUST00000020649 Mapk8ip2Q9ERE9 830 aa14.52□□□□□ -0.08
Rad50-201ENSMUST00000020649 Baz1bQ9Z277 1479 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms