RNA–Protein interactions for RNA: ENSMUST00000017552.12

Cacnb1-201, Transcript of Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cacnb1, Length 3,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1-201ENSMUST00000017552 Rhox8Q6VSS7 320 aa27.2■■□□□ 1.95
Cacnb1-201ENSMUST00000017552 NischQ80TM9 1593 aa26.89■■□□□ 1.9
Cacnb1-201ENSMUST00000017552 Abcc9P70170 1546 aa25.7■■□□□ 1.7
Cacnb1-201ENSMUST00000017552 Ehmt2Q9Z148 1263 aaKnown RBP25.56■■□□□ 1.68
Cacnb1-201ENSMUST00000017552 Abcc8B2RUS7 1588 aa25.19■■□□□ 1.62
Cacnb1-201ENSMUST00000017552 Ccdc136Q3TVA9 1136 aa25.16■■□□□ 1.62
Cacnb1-201ENSMUST00000017552 Gm35339A0A140LHH9 1649 aa25.02■■□□□ 1.6
Cacnb1-201ENSMUST00000017552 Ccdc180J3QNE4 1664 aa24.43■■□□□ 1.5
Cacnb1-201ENSMUST00000017552 Trim41Q5NCC3 630 aa24.28■■□□□ 1.48
Cacnb1-201ENSMUST00000017552 Rpgrip1Q9EPQ2 1331 aa24.28■■□□□ 1.48
Cacnb1-201ENSMUST00000017552 Rtl1Q7M732 1744 aa24.26■■□□□ 1.47
Cacnb1-201ENSMUST00000017552 Acin1Q9JIX8 1338 aaKnown RBP24.18■■□□□ 1.46
Cacnb1-201ENSMUST00000017552 Gab3Q8BSM5 595 aa24.14■■□□□ 1.45
Cacnb1-201ENSMUST00000017552 Cngb1E1AZ71 1325 aa24■■□□□ 1.43
Cacnb1-201ENSMUST00000017552 HrcG5E8J6 738 aa23.86■■□□□ 1.41
Cacnb1-201ENSMUST00000017552 Zcchc6Q5BLK4 1491 aaKnown RBP23.84■■□□□ 1.41
Cacnb1-201ENSMUST00000017552 Pcgf6Q99NA9 353 aa23.71■■□□□ 1.39
Cacnb1-201ENSMUST00000017552 Zeb1Q64318 1117 aa23.7■■□□□ 1.38
Cacnb1-201ENSMUST00000017552 Rb1cc1Q9ESK9 1588 aa23.59■■□□□ 1.37
Cacnb1-201ENSMUST00000017552 Dcaf1Q80TR8 1506 aa23.55■■□□□ 1.36
Cacnb1-201ENSMUST00000017552 Esf1Q3V1V3 845 aaKnown RBP23.52■■□□□ 1.36
Cacnb1-201ENSMUST00000017552 Supt5hO55201 1082 aaKnown RBP23.48■■□□□ 1.35
Cacnb1-201ENSMUST00000017552 Chic1Q8CBW7 227 aa23.43■■□□□ 1.34
Cacnb1-201ENSMUST00000017552 ScribQ80U72 1612 aa23.25■■□□□ 1.31
Cacnb1-201ENSMUST00000017552 Ppargc1bQ8VHJ7 1014 aa23.21■■□□□ 1.31
Cacnb1-201ENSMUST00000017552 Myt1lP97500 1187 aa23.2■■□□□ 1.3
Cacnb1-201ENSMUST00000017552 Kdm5dQ62240 1548 aa23.18■■□□□ 1.3
Cacnb1-201ENSMUST00000017552 UbtfP25976 765 aaKnown RBP23.17■■□□□ 1.3
Cacnb1-201ENSMUST00000017552 Baz1aO88379 1555 aa23.09■■□□□ 1.29
Cacnb1-201ENSMUST00000017552 Wdr66E9Q743 1299 aa23.06■■□□□ 1.28
Cacnb1-201ENSMUST00000017552 Mier1Q5UAK0 511 aa23.04■■□□□ 1.28
Cacnb1-201ENSMUST00000017552 Cep164Q5DU05 1446 aa22.93■■□□□ 1.26
Cacnb1-201ENSMUST00000017552 Rsf1E9PWW9 1441 aaKnown RBP22.87■■□□□ 1.25
Cacnb1-201ENSMUST00000017552 NacadQ5SWP3 1504 aa22.85■■□□□ 1.25
Cacnb1-201ENSMUST00000017552 Npm2Q80W85 207 aa22.83■■□□□ 1.25
Cacnb1-201ENSMUST00000017552 Neurod1Q60867 357 aa22.83■■□□□ 1.24
Cacnb1-201ENSMUST00000017552 Sall2Q9QX96 1004 aa22.74■■□□□ 1.23
Cacnb1-201ENSMUST00000017552 Ccdc88bQ4QRL3 1481 aa22.7■■□□□ 1.22
Cacnb1-201ENSMUST00000017552 NefmP08553 848 aa22.68■■□□□ 1.22
Cacnb1-201ENSMUST00000017552 Las1lA2BE28 776 aaKnown RBP22.63■■□□□ 1.21
Cacnb1-201ENSMUST00000017552 Il27Q8K3I6 234 aa22.59■■□□□ 1.21
Cacnb1-201ENSMUST00000017552 Cecr2E9Q2Z1 1453 aa22.58■■□□□ 1.21
Cacnb1-201ENSMUST00000017552 Ap3b1Q9Z1T1 1105 aa22.58■■□□□ 1.2
Cacnb1-201ENSMUST00000017552 Plekhg3Q4VAC9 1341 aa22.55■■□□□ 1.2
Cacnb1-201ENSMUST00000017552 Brd4Q9ESU6 1400 aaKnown RBP22.52■■□□□ 1.2
Cacnb1-201ENSMUST00000017552 Aebp2Q9Z248 504 aaKnown RBP22.46■■□□□ 1.19
Cacnb1-201ENSMUST00000017552 Smarca2Q6DIC0 1577 aa22.45■■□□□ 1.18
Cacnb1-201ENSMUST00000017552 Golga3P55937 1487 aa22.37■■□□□ 1.17
Cacnb1-201ENSMUST00000017552 Gm38655A0A286YDK6 273 aa22.33■■□□□ 1.17
Cacnb1-201ENSMUST00000017552 Eid3Q3V124 375 aa22.32■■□□□ 1.16
Cacnb1-201ENSMUST00000017552 Sycp2Q9CUU3 1500 aa22.29■■□□□ 1.16
Cacnb1-201ENSMUST00000017552 Mapk8ip2Q9ERE9 830 aa22.27■■□□□ 1.16
Cacnb1-201ENSMUST00000017552 Csrnp3P59055 597 aa22.24■■□□□ 1.15
Cacnb1-201ENSMUST00000017552 Nop58Q6DFW4 536 aaKnown RBP22.19■■□□□ 1.14
Cacnb1-201ENSMUST00000017552 Synj1Q8CHC4 1574 aa22.17■■□□□ 1.14
Cacnb1-201ENSMUST00000017552 Cdk11bP24788 784 aaKnown RBP22.16■■□□□ 1.14
Cacnb1-201ENSMUST00000017552 TonslQ6NZL6 1363 aa22.11■■□□□ 1.13
Cacnb1-201ENSMUST00000017552 Crybg2B7ZCC2 1516 aa22.06■■□□□ 1.12
Cacnb1-201ENSMUST00000017552 Fam50aQ9WV03 339 aaKnown RBP22.02■■□□□ 1.12
Cacnb1-201ENSMUST00000017552 Clip1Q922J3 1391 aa22.02■■□□□ 1.12
Cacnb1-201ENSMUST00000017552 CftrP26361 1476 aa22.02■■□□□ 1.11
Cacnb1-201ENSMUST00000017552 Lmod2Q3UHZ5 550 aa22.01■■□□□ 1.11
Cacnb1-201ENSMUST00000017552 Ube2uB1AUC4 352 aa22■■□□□ 1.11
Cacnb1-201ENSMUST00000017552 ClspnQ80YR7 1315 aa21.94■■□□□ 1.1
Cacnb1-201ENSMUST00000017552 1700123L14RikQ3V2K7 440 aa21.91■■□□□ 1.1
Cacnb1-201ENSMUST00000017552 Slc24a1Q91WD8 1130 aa21.87■■□□□ 1.09
Cacnb1-201ENSMUST00000017552 Anks4bQ8K3X6 423 aa21.85■■□□□ 1.09
Cacnb1-201ENSMUST00000017552 Rapgef2Q8CHG7 1496 aa21.81■■□□□ 1.08
Cacnb1-201ENSMUST00000017552 Cep162Q6ZQ06 1403 aa21.78■■□□□ 1.08
Cacnb1-201ENSMUST00000017552 NclP09405 707 aaKnown RBP21.73■■□□□ 1.07
Cacnb1-201ENSMUST00000017552 BicraF8VPZ9 1578 aa21.73■■□□□ 1.07
Cacnb1-201ENSMUST00000017552 Cc2d2aQ8CFW7 1633 aa21.69■■□□□ 1.06
Cacnb1-201ENSMUST00000017552 Setd5Q5XJV7 1441 aa21.56■■□□□ 1.04
Cacnb1-201ENSMUST00000017552 Fmn1Q05860 1466 aa21.55■■□□□ 1.04
Cacnb1-201ENSMUST00000017552 CenpbP27790 599 aa21.54■■□□□ 1.04
Cacnb1-201ENSMUST00000017552 SafbD3YXK2 937 aaKnown RBP21.53■■□□□ 1.04
Cacnb1-201ENSMUST00000017552 BlmO88700 1416 aa21.5■■□□□ 1.03
Cacnb1-201ENSMUST00000017552 Kif15Q6P9L6 1387 aa21.49■■□□□ 1.03
Cacnb1-201ENSMUST00000017552 Cttnbp2B9EJA2 1648 aa21.46■■□□□ 1.03
Cacnb1-201ENSMUST00000017552 Chic2Q9D9G3 165 aa21.45■■□□□ 1.02
Cacnb1-201ENSMUST00000017552 Hnrnpul2Q00PI9 745 aaKnown RBP21.44■■□□□ 1.02
Cacnb1-201ENSMUST00000017552 Npm1Q61937 292 aaKnown RBP21.43■■□□□ 1.02
Cacnb1-201ENSMUST00000017552 Smarca4Q3TKT4 1613 aaKnown RBP21.43■■□□□ 1.02
Cacnb1-201ENSMUST00000017552 Top2bQ64511 1612 aa21.39■■□□□ 1.02
Cacnb1-201ENSMUST00000017552 Eif5bQ05D44 1216 aaKnown RBP21.37■■□□□ 1.01
Cacnb1-201ENSMUST00000017552 Eea1Q8BL66 1411 aa21.36■■□□□ 1.01
Cacnb1-201ENSMUST00000017552 PtprkP35822 1457 aa21.33■■□□□ 1.01
Cacnb1-201ENSMUST00000017552 Hspa5P20029 655 aaKnown RBP21.33■■□□□ 1.01
Cacnb1-201ENSMUST00000017552 Ubl4bQ9CQ84 188 aa21.31■■□□□ 1
Cacnb1-201ENSMUST00000017552 Top2aQ01320 1528 aaKnown RBP21.31■■□□□ 1
Cacnb1-201ENSMUST00000017552 Aplp2Q06335 707 aa21.26■□□□□ 0.99
Cacnb1-201ENSMUST00000017552 Sin3aQ60520 1274 aaKnown RBP21.25■□□□□ 0.99
Cacnb1-201ENSMUST00000017552 Iqgap2Q3UQ44 1575 aa21.24■□□□□ 0.99
Cacnb1-201ENSMUST00000017552 Zbtb7cQ8VCZ7 619 aa21.2■□□□□ 0.99
Cacnb1-201ENSMUST00000017552 Zbtb4Q5F293 982 aa21.16■□□□□ 0.98
Cacnb1-201ENSMUST00000017552 Arap1Q4LDD4 1452 aa21.15■□□□□ 0.98
Cacnb1-201ENSMUST00000017552 Arhgap35Q91YM2 1499 aa21.15■□□□□ 0.98
Cacnb1-201ENSMUST00000017552 Fam71e1A1L3C1 212 aa21.12■□□□□ 0.97
Cacnb1-201ENSMUST00000017552 Ncapd3Q6ZQK0 1506 aa21.12■□□□□ 0.97
Cacnb1-201ENSMUST00000017552 Atad2bE9Q166 1460 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms