RNA–Protein interactions for RNA: ENSMUST00000007993.15

Rbm28-201, Transcript of RNA-binding protein 28, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rbm28, Length 4,465 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28-201ENSMUST00000007993 Rhox8Q6VSS7 320 aa15.17■□□□□ 0.02
Rbm28-201ENSMUST00000007993 NischQ80TM9 1593 aa15.06■□□□□ 0
Rbm28-201ENSMUST00000007993 Gm35339A0A140LHH9 1649 aa14.92□□□□□ -0.02
Rbm28-201ENSMUST00000007993 Rpgrip1Q9EPQ2 1331 aa14.75□□□□□ -0.05
Rbm28-201ENSMUST00000007993 Abcc9P70170 1546 aa14.55□□□□□ -0.08
Rbm28-201ENSMUST00000007993 Abcc8B2RUS7 1588 aa14.38□□□□□ -0.11
Rbm28-201ENSMUST00000007993 Rtl1Q7M732 1744 aa14.2□□□□□ -0.14
Rbm28-201ENSMUST00000007993 Ccdc180J3QNE4 1664 aa14.12□□□□□ -0.15
Rbm28-201ENSMUST00000007993 Acin1Q9JIX8 1338 aaKnown RBP13.84□□□□□ -0.19
Rbm28-201ENSMUST00000007993 HrcG5E8J6 738 aa13.74□□□□□ -0.21
Rbm28-201ENSMUST00000007993 Ehmt2Q9Z148 1263 aaKnown RBP13.71□□□□□ -0.22
Rbm28-201ENSMUST00000007993 Ccdc136Q3TVA9 1136 aa13.68□□□□□ -0.22
Rbm28-201ENSMUST00000007993 Trim41Q5NCC3 630 aa13.64□□□□□ -0.23
Rbm28-201ENSMUST00000007993 Las1lA2BE28 776 aaKnown RBP13.59□□□□□ -0.23
Rbm28-201ENSMUST00000007993 ScribQ80U72 1612 aa13.51□□□□□ -0.25
Rbm28-201ENSMUST00000007993 Cngb1E1AZ71 1325 aa13.51□□□□□ -0.25
Rbm28-201ENSMUST00000007993 Dcaf1Q80TR8 1506 aa13.43□□□□□ -0.26
Rbm28-201ENSMUST00000007993 NacadQ5SWP3 1504 aa13.4□□□□□ -0.26
Rbm28-201ENSMUST00000007993 Esf1Q3V1V3 845 aaKnown RBP13.37□□□□□ -0.27
Rbm28-201ENSMUST00000007993 NefmP08553 848 aa13.37□□□□□ -0.27
Rbm28-201ENSMUST00000007993 Pcgf6Q99NA9 353 aa13.32□□□□□ -0.28
Rbm28-201ENSMUST00000007993 Kdm5dQ62240 1548 aa13.29□□□□□ -0.28
Rbm28-201ENSMUST00000007993 Zeb1Q64318 1117 aa13.24□□□□□ -0.29
Rbm28-201ENSMUST00000007993 Gab3Q8BSM5 595 aa13.23□□□□□ -0.29
Rbm28-201ENSMUST00000007993 Rb1cc1Q9ESK9 1588 aa13.16□□□□□ -0.3
Rbm28-201ENSMUST00000007993 Wdr66E9Q743 1299 aa13.16□□□□□ -0.3
Rbm28-201ENSMUST00000007993 Zcchc6Q5BLK4 1491 aaKnown RBP13.05□□□□□ -0.32
Rbm28-201ENSMUST00000007993 Sycp2Q9CUU3 1500 aa13.04□□□□□ -0.32
Rbm28-201ENSMUST00000007993 Baz1aO88379 1555 aa13.01□□□□□ -0.33
Rbm28-201ENSMUST00000007993 Cep164Q5DU05 1446 aa12.97□□□□□ -0.33
Rbm28-201ENSMUST00000007993 Supt5hO55201 1082 aaKnown RBP12.97□□□□□ -0.33
Rbm28-201ENSMUST00000007993 Npm2Q80W85 207 aa12.97□□□□□ -0.33
Rbm28-201ENSMUST00000007993 Myt1lP97500 1187 aa12.96□□□□□ -0.33
Rbm28-201ENSMUST00000007993 CenpbP27790 599 aa12.95□□□□□ -0.34
Rbm28-201ENSMUST00000007993 Crybg2B7ZCC2 1516 aa12.93□□□□□ -0.34
Rbm28-201ENSMUST00000007993 Myt1Q8CFC2 1127 aa12.92□□□□□ -0.34
Rbm28-201ENSMUST00000007993 UbtfP25976 765 aaKnown RBP12.87□□□□□ -0.35
Rbm28-201ENSMUST00000007993 Cdk11bP24788 784 aaKnown RBP12.86□□□□□ -0.35
Rbm28-201ENSMUST00000007993 Ube2uB1AUC4 352 aa12.84□□□□□ -0.35
Rbm28-201ENSMUST00000007993 Pelp1Q9DBD5 1123 aaKnown RBP12.84□□□□□ -0.35
Rbm28-201ENSMUST00000007993 Mier1Q5UAK0 511 aa12.8□□□□□ -0.36
Rbm28-201ENSMUST00000007993 Stra8P70278 393 aa12.78□□□□□ -0.36
Rbm28-201ENSMUST00000007993 Brd4Q9ESU6 1400 aaKnown RBP12.77□□□□□ -0.36
Rbm28-201ENSMUST00000007993 Nop58Q6DFW4 536 aaKnown RBP12.74□□□□□ -0.37
Rbm28-201ENSMUST00000007993 Il27Q8K3I6 234 aa12.71□□□□□ -0.37
Rbm28-201ENSMUST00000007993 Tnnt3Q9QZ47 272 aa12.69□□□□□ -0.38
Rbm28-201ENSMUST00000007993 Neurod1Q60867 357 aa12.66□□□□□ -0.38
Rbm28-201ENSMUST00000007993 TonslQ6NZL6 1363 aa12.65□□□□□ -0.38
Rbm28-201ENSMUST00000007993 ClspnQ80YR7 1315 aa12.65□□□□□ -0.38
Rbm28-201ENSMUST00000007993 BicraF8VPZ9 1578 aa12.65□□□□□ -0.38
Rbm28-201ENSMUST00000007993 Anks4bQ8K3X6 423 aa12.63□□□□□ -0.39
Rbm28-201ENSMUST00000007993 Smarca2Q6DIC0 1577 aa12.59□□□□□ -0.39
Rbm28-201ENSMUST00000007993 Chic1Q8CBW7 227 aa12.59□□□□□ -0.39
Rbm28-201ENSMUST00000007993 Pds5bQ4VA53 1446 aaKnown RBP12.56□□□□□ -0.4
Rbm28-201ENSMUST00000007993 Sall2Q9QX96 1004 aa12.56□□□□□ -0.4
Rbm28-201ENSMUST00000007993 Golga3P55937 1487 aa12.5□□□□□ -0.41
Rbm28-201ENSMUST00000007993 Aplp2Q06335 707 aa12.47□□□□□ -0.41
Rbm28-201ENSMUST00000007993 Atad2bE9Q166 1460 aaKnown RBP12.44□□□□□ -0.42
Rbm28-201ENSMUST00000007993 Smarca4Q3TKT4 1613 aaKnown RBP12.42□□□□□ -0.42
Rbm28-201ENSMUST00000007993 Rsf1E9PWW9 1441 aaKnown RBP12.41□□□□□ -0.42
Rbm28-201ENSMUST00000007993 Rtl5Q5DTT4 599 aa12.4□□□□□ -0.42
Rbm28-201ENSMUST00000007993 Ap3b1Q9Z1T1 1105 aa12.39□□□□□ -0.43
Rbm28-201ENSMUST00000007993 NclP09405 707 aaKnown RBP12.38□□□□□ -0.43
Rbm28-201ENSMUST00000007993 Clip1Q922J3 1391 aa12.37□□□□□ -0.43
Rbm28-201ENSMUST00000007993 Ercc6F8VPZ5 1481 aa12.37□□□□□ -0.43
Rbm28-201ENSMUST00000007993 Cecr2E9Q2Z1 1453 aa12.36□□□□□ -0.43
Rbm28-201ENSMUST00000007993 Csrnp3P59055 597 aa12.33□□□□□ -0.43
Rbm28-201ENSMUST00000007993 Plekhg3Q4VAC9 1341 aa12.32□□□□□ -0.44
Rbm28-201ENSMUST00000007993 Fam50aQ9WV03 339 aaKnown RBP12.31□□□□□ -0.44
Rbm28-201ENSMUST00000007993 Ppargc1bQ8VHJ7 1014 aa12.31□□□□□ -0.44
Rbm28-201ENSMUST00000007993 Iqgap2Q3UQ44 1575 aa12.28□□□□□ -0.44
Rbm28-201ENSMUST00000007993 Ccer2J3QPU5 274 aa12.27□□□□□ -0.45
Rbm28-201ENSMUST00000007993 CftrP26361 1476 aa12.26□□□□□ -0.45
Rbm28-201ENSMUST00000007993 Anp32aO35381 247 aa12.26□□□□□ -0.45
Rbm28-201ENSMUST00000007993 Amer1Q7TS75 1132 aa12.25□□□□□ -0.45
Rbm28-201ENSMUST00000007993 Cttnbp2B9EJA2 1648 aa12.25□□□□□ -0.45
Rbm28-201ENSMUST00000007993 NrdcQ8BHG1 1161 aa12.24□□□□□ -0.45
Rbm28-201ENSMUST00000007993 1700123L14RikQ3V2K7 440 aa12.23□□□□□ -0.45
Rbm28-201ENSMUST00000007993 Ccdc88bQ4QRL3 1481 aa12.22□□□□□ -0.45
Rbm28-201ENSMUST00000007993 Slc24a1Q91WD8 1130 aa12.22□□□□□ -0.45
Rbm28-201ENSMUST00000007993 Synj1Q8CHC4 1574 aa12.2□□□□□ -0.46
Rbm28-201ENSMUST00000007993 Aebp2Q9Z248 504 aaKnown RBP12.19□□□□□ -0.46
Rbm28-201ENSMUST00000007993 Npm1Q61937 292 aaKnown RBP12.14□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Anp32bQ9EST5 272 aaKnown RBP12.14□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Fmn1Q05860 1466 aa12.13□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Eid3Q3V124 375 aa12.1□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Phldb1Q6PDH0 1371 aaKnown RBP12.1□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Cep162Q6ZQ06 1403 aa12.09□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Eea1Q8BL66 1411 aa12.09□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Lmod2Q3UHZ5 550 aa12.09□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Wdr62Q3U3T8 1523 aa12.09□□□□□ -0.47
Rbm28-201ENSMUST00000007993 Thoc2B1AZI6 1594 aaKnown RBP12.07□□□□□ -0.48
Rbm28-201ENSMUST00000007993 Setd5Q5XJV7 1441 aa12.07□□□□□ -0.48
Rbm28-201ENSMUST00000007993 Frmpd1A2AKB4 1549 aa12.06□□□□□ -0.48
Rbm28-201ENSMUST00000007993 DiexfQ8BTT6 772 aaKnown RBP12.05□□□□□ -0.48
Rbm28-201ENSMUST00000007993 Eif5bQ05D44 1216 aaKnown RBP12.04□□□□□ -0.48
Rbm28-201ENSMUST00000007993 Ubl4bQ9CQ84 188 aa12.04□□□□□ -0.48
Rbm28-201ENSMUST00000007993 NeflP08551 543 aa12.04□□□□□ -0.48
Rbm28-201ENSMUST00000007993 Baz1bQ9Z277 1479 aa12.04□□□□□ -0.48
Rbm28-201ENSMUST00000007993 BlmO88700 1416 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 431.5 ms