RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W MCM5P29496 775 aaKnown RBP4.03□□□□□ -1.76
YOP1YPR028W RAD53P22216 821 aa4.02□□□□□ -1.77
YOP1YPR028W EXO5P38289 585 aa4.02□□□□□ -1.77
YOP1YPR028W HSE1P38753 452 aa4.02□□□□□ -1.77
YOP1YPR028W NEM1P38757 446 aa4.02□□□□□ -1.77
YOP1YPR028W RSA3Q05942 220 aaKnown RBP4.02□□□□□ -1.77
YOP1YPR028W RSC58Q07979 502 aa4.02□□□□□ -1.77
YOP1YPR028W NBA1Q08229 501 aaKnown RBP4.02□□□□□ -1.77
YOP1YPR028W NOB1Q08444 459 aaKnown RBP4.02□□□□□ -1.77
YOP1YPR028W SSA4P22202 642 aaKnown RBP4.01□□□□□ -1.77
YOP1YPR028W DOM34P33309 386 aa4.01□□□□□ -1.77
YOP1YPR028W LEO1P38439 464 aa4.01□□□□□ -1.77
YOP1YPR028W HNT2P49775 206 aa4.01□□□□□ -1.77
YOP1YPR028W DMA2P53924 522 aa4.01□□□□□ -1.77
YOP1YPR028W URN1Q06525 465 aaKnown RBP4.01□□□□□ -1.77
YOP1YPR028W CYC1P00044 109 aaPredicted RBP4□□□□□ -1.77
YOP1YPR028W PMI40P29952 429 aaKnown RBP4□□□□□ -1.77
YOP1YPR028W SHU2P38957 223 aa4□□□□□ -1.77
YOP1YPR028W AIM21P40563 679 aa4□□□□□ -1.77
YOP1YPR028W MTR4P47047 1073 aaKnown RBP4□□□□□ -1.77
YOP1YPR028W YNL011CP53980 444 aa4□□□□□ -1.77
YOP1YPR028W ROT1Q03691 256 aa4□□□□□ -1.77
YOP1YPR028W BSC2Q05611 235 aa4□□□□□ -1.77
YOP1YPR028W DUS4Q06063 367 aa4□□□□□ -1.77
YOP1YPR028W NTO1Q12311 748 aa4□□□□□ -1.77
YOP1YPR028W RVS167P39743 482 aaKnown RBP3.99□□□□□ -1.77
YOP1YPR028W YJL045WP47052 634 aa3.99□□□□□ -1.77
YOP1YPR028W MNN10P50108 393 aaKnown RBP3.99□□□□□ -1.77
YOP1YPR028W MCM6P53091 1017 aaKnown RBP3.99□□□□□ -1.77
YOP1YPR028W LAP2Q10740 671 aa3.99□□□□□ -1.77
YOP1YPR028W STE11P23561 717 aa3.97□□□□□ -1.77
YOP1YPR028W YSC84P32793 468 aa3.97□□□□□ -1.77
YOP1YPR028W GLO3P38682 493 aaKnown RBP3.97□□□□□ -1.77
YOP1YPR028W CHS7P38843 316 aa3.97□□□□□ -1.77
YOP1YPR028W MON1P53129 644 aa3.97□□□□□ -1.77
YOP1YPR028W LST4P34239 828 aa3.96□□□□□ -1.78
YOP1YPR028W PLB2Q03674 706 aa3.96□□□□□ -1.78
YOP1YPR028W UTP5Q04177 643 aaKnown RBP3.96□□□□□ -1.78
YOP1YPR028W TMA10Q06177 86 aa3.96□□□□□ -1.78
YOP1YPR028W CDC20P26309 610 aa3.95□□□□□ -1.78
YOP1YPR028W SEC26P41810 973 aaKnown RBP3.95□□□□□ -1.78
YOP1YPR028W XKS1P42826 600 aa3.95□□□□□ -1.78
YOP1YPR028W ATG14P38270 344 aa3.94□□□□□ -1.78
YOP1YPR028W QNS1P38795 714 aaKnown RBP3.94□□□□□ -1.78
YOP1YPR028W QDR1P40475 563 aa3.94□□□□□ -1.78
YOP1YPR028W PHO23P50947 330 aa3.94□□□□□ -1.78
YOP1YPR028W CDC55Q00362 526 aa3.94□□□□□ -1.78
YOP1YPR028W RXT3Q07458 294 aa3.94□□□□□ -1.78
YOP1YPR028W ACK1Q07622 623 aaPredicted RBP3.94□□□□□ -1.78
YOP1YPR028W INP54Q08227 384 aaKnown RBP3.94□□□□□ -1.78
YOP1YPR028W YNR063WP53749 607 aa3.93□□□□□ -1.78
YOP1YPR028W RCL1Q08096 367 aaPredicted RBP3.93□□□□□ -1.78
YOP1YPR028W MNL2Q12205 849 aa3.93□□□□□ -1.78
YOP1YPR028W COQ4O13525 335 aa3.92□□□□□ -1.78
YOP1YPR028W CCZ1P38273 704 aa3.92□□□□□ -1.78
YOP1YPR028W NOG1Q02892 647 aaKnown RBP3.92□□□□□ -1.78
YOP1YPR028W SNM1P40993 198 aa3.91□□□□□ -1.78
YOP1YPR028W TRS120Q04183 1289 aa3.91□□□□□ -1.78
YOP1YPR028W RSB1Q08417 382 aa3.91□□□□□ -1.78
YOP1YPR028W GPB1Q08886 897 aa3.91□□□□□ -1.78
YOP1YPR028W PMA1P05030 918 aaKnown RBP3.9□□□□□ -1.79
YOP1YPR028W VPS53P47061 822 aa3.9□□□□□ -1.79
YOP1YPR028W KIN4Q01919 800 aa3.9□□□□□ -1.79
YOP1YPR028W GAL10P04397 699 aa3.89□□□□□ -1.79
YOP1YPR028W MSH3P25336 1018 aa3.89□□□□□ -1.79
YOP1YPR028W PPM2Q08282 695 aa3.89□□□□□ -1.79
YOP1YPR028W SPO21Q12411 609 aa3.89□□□□□ -1.79
YOP1YPR028W CMP2P14747 604 aa3.88□□□□□ -1.79
YOP1YPR028W VMA4P22203 233 aaKnown RBP3.88□□□□□ -1.79
YOP1YPR028W DEF1P35732 738 aaKnown RBP3.88□□□□□ -1.79
YOP1YPR028W BAP2P38084 609 aa3.88□□□□□ -1.79
YOP1YPR028W PBP1P53297 722 aaKnown RBP3.88□□□□□ -1.79
YOP1YPR028W RSM24Q03976 319 aa3.88□□□□□ -1.79
YOP1YPR028W KAR5Q04746 504 aa3.88□□□□□ -1.79
YOP1YPR028W CDC6P09119 513 aa3.87□□□□□ -1.79
YOP1YPR028W SRM1P21827 482 aa3.87□□□□□ -1.79
YOP1YPR028W DCG1P32460 244 aa3.87□□□□□ -1.79
YOP1YPR028W MSS4P38994 779 aa3.87□□□□□ -1.79
YOP1YPR028W ACF4P47129 309 aa3.87□□□□□ -1.79
YOP1YPR028W TNA1P53322 534 aa3.87□□□□□ -1.79
YOP1YPR028W PEX13P80667 386 aa3.87□□□□□ -1.79
YOP1YPR028W PIK1P39104 1066 aa3.86□□□□□ -1.79
YOP1YPR028W ATG1P53104 897 aa3.86□□□□□ -1.79
YOP1YPR028W HOS3Q02959 697 aaKnown RBP3.86□□□□□ -1.79
YOP1YPR028W RKM2Q03942 479 aa3.86□□□□□ -1.79
YOP1YPR028W YLR224WQ05947 369 aa3.86□□□□□ -1.79
YOP1YPR028W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
YOP1YPR028W KIP1P28742 1111 aa3.85□□□□□ -1.79
YOP1YPR028W OAR1P35731 278 aa3.85□□□□□ -1.79
YOP1YPR028W BDF2Q07442 638 aa3.85□□□□□ -1.79
YOP1YPR028W NOC3Q07896 663 aaPredicted RBP3.85□□□□□ -1.79
YOP1YPR028W ADD66P36040 267 aa3.84□□□□□ -1.79
YOP1YPR028W MOH1P38191 138 aa3.84□□□□□ -1.79
YOP1YPR028W RFC5P38251 354 aa3.84□□□□□ -1.79
YOP1YPR028W UBA2P52488 636 aa3.84□□□□□ -1.79
YOP1YPR028W VPS62P53285 467 aa3.84□□□□□ -1.79
YOP1YPR028W YAP6Q03935 383 aa3.84□□□□□ -1.79
YOP1YPR028W YCS4Q06156 1176 aa3.84□□□□□ -1.79
YOP1YPR028W GPB2P39717 880 aa3.83□□□□□ -1.8
YOP1YPR028W RPL34AP87262 121 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms