RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C TGL1P34163 548 aa8.47□□□□□ -1.05
UME1YPL139C CIC1P38779 376 aaKnown RBP8.47□□□□□ -1.05
UME1YPL139C HXT13P39924 564 aa8.47□□□□□ -1.05
UME1YPL139C PKC1P24583 1151 aa8.46□□□□□ -1.06
UME1YPL139C BCS1P32839 456 aa8.46□□□□□ -1.06
UME1YPL139C RER2P35196 286 aa8.46□□□□□ -1.06
UME1YPL139C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
UME1YPL139C VPS62P53285 467 aa8.46□□□□□ -1.06
UME1YPL139C VPS30Q02948 557 aa8.46□□□□□ -1.06
UME1YPL139C PHR1P05066 565 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
UME1YPL139C PRE10P21242 288 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06 RIP-Chip
UME1YPL139C MAL31P38156 614 aa8.45□□□□□ -1.06
UME1YPL139C YGL039WP53183 348 aaKnown RBP8.45□□□□□ -1.06
UME1YPL139C FOL1P53848 824 aa8.45□□□□□ -1.06
UME1YPL139C ALD6P54115 500 aaKnown RBP8.45□□□□□ -1.06
UME1YPL139C MYO5Q04439 1219 aaKnown RBP8.45□□□□□ -1.06
UME1YPL139C DUS3Q06053 668 aaKnown RBP8.45□□□□□ -1.06
UME1YPL139C TFC6Q06339 672 aa8.45□□□□□ -1.06
UME1YPL139C NUC1P08466 329 aa8.44□□□□□ -1.06
UME1YPL139C GUT1P32190 709 aa8.44□□□□□ -1.06
UME1YPL139C SOL4P53315 255 aa8.44□□□□□ -1.06
UME1YPL139C BUL2Q03758 920 aaKnown RBP8.44□□□□□ -1.06
UME1YPL139C FPR4Q06205 392 aaPredicted RBP8.44□□□□□ -1.06
UME1YPL139C UTP4Q06679 776 aaKnown RBP8.44□□□□□ -1.06
UME1YPL139C ICL2Q12031 575 aa8.44□□□□□ -1.06
UME1YPL139C SSF2Q12153 453 aaPredicted RBP8.44□□□□□ -1.06
UME1YPL139C SUT2Q12286 268 aa8.44□□□□□ -1.06
UME1YPL139C ECM29P38737 1868 aa8.43□□□□□ -1.06
UME1YPL139C MAK31P23059 88 aa8.43□□□□□ -1.06
UME1YPL139C IMP2'P32351 346 aa8.43□□□□□ -1.06
UME1YPL139C CRG1P38892 291 aaRIP-Chip data8.43□□□□□ -1.06not detected
UME1YPL139C GPB2P39717 880 aa8.43□□□□□ -1.06
UME1YPL139C ATH1P48016 1211 aa8.43□□□□□ -1.06
UME1YPL139C RPT6Q01939 405 aaKnown RBP8.43□□□□□ -1.06
UME1YPL139C ECM16Q04217 1267 aaKnown RBP8.43□□□□□ -1.06
UME1YPL139C SPN1Q06505 410 aaPredicted RBP8.43□□□□□ -1.06
UME1YPL139C TAO3P40468 2376 aa8.43□□□□□ -1.06
UME1YPL139C YUR1P26725 428 aa8.42□□□□□ -1.06
UME1YPL139C GCR2Q01722 534 aa8.42□□□□□ -1.06
UME1YPL139C YOR131CQ12486 218 aa8.42□□□□□ -1.06
UME1YPL139C YOR111WQ99210 232 aa8.42□□□□□ -1.06
UME1YPL139C RPL8BP29453 256 aaKnown RBP8.41□□□□□ -1.06
UME1YPL139C SRP40P32583 406 aaPredicted RBP8.41□□□□□ -1.06
UME1YPL139C MXR1P40029 184 aa8.41□□□□□ -1.06
UME1YPL139C ECM23Q02710 187 aa8.41□□□□□ -1.06
UME1YPL139C YMR321CQ04898 105 aa8.41□□□□□ -1.06
UME1YPL139C SPH1Q06160 661 aa8.41□□□□□ -1.06
UME1YPL139C CSC1Q06538 782 aa8.41□□□□□ -1.06
UME1YPL139C ERP3Q12403 225 aa8.41□□□□□ -1.06
UME1YPL139C PEP3P27801 918 aa8.4□□□□□ -1.06
UME1YPL139C DBP7P36120 742 aaKnown RBP8.4□□□□□ -1.06
UME1YPL139C YGR125WP53273 1036 aa8.4□□□□□ -1.06
UME1YPL139C SLD5Q03406 294 aa8.4□□□□□ -1.06
UME1YPL139C MET7Q08645 548 aa8.4□□□□□ -1.06
UME1YPL139C RGT1P32862 1170 aa8.39□□□□□ -1.07
UME1YPL139C DLD1P32891 587 aa8.39□□□□□ -1.07
UME1YPL139C LDH1P38139 375 aa8.39□□□□□ -1.07
UME1YPL139C VPS45P38932 577 aa8.39□□□□□ -1.07
UME1YPL139C AIM9P40053 627 aaKnown RBP8.39□□□□□ -1.07
UME1YPL139C MDM20Q12387 796 aaKnown RBP8.39□□□□□ -1.07
UME1YPL139C MYO1P08964 1928 aa8.39□□□□□ -1.07
UME1YPL139C KTR2P33550 425 aa8.38□□□□□ -1.07
UME1YPL139C UIP5P36137 443 aa8.38□□□□□ -1.07
UME1YPL139C MAM3Q12296 706 aa8.38□□□□□ -1.07
UME1YPL139C RKM4Q12504 494 aa8.38□□□□□ -1.07
UME1YPL139C TRL1P09880 827 aaKnown RBP8.37□□□□□ -1.07
UME1YPL139C MCR1P36060 302 aaKnown RBP8.37□□□□□ -1.07
UME1YPL139C MDM1Q01846 1127 aa8.37□□□□□ -1.07
UME1YPL139C EST2Q06163 884 aa8.37□□□□□ -1.07
UME1YPL139C YLR326WQ06170 240 aaKnown RBP8.37□□□□□ -1.07
UME1YPL139C ECM30Q06673 1274 aa8.37□□□□□ -1.07
UME1YPL139C CDC19P00549 500 aaKnown RBP8.36□□□□□ -1.07
UME1YPL139C AI4P03878 556 aa8.36□□□□□ -1.07
UME1YPL139C KSP1P38691 1029 aaKnown RBP8.36□□□□□ -1.07
UME1YPL139C YJR107WP47145 328 aa8.36□□□□□ -1.07
UME1YPL139C DSE3Q08729 430 aa8.36□□□□□ -1.07
UME1YPL139C AKR1P39010 764 aa8.35□□□□□ -1.07
UME1YPL139C VID28P40547 921 aa8.35□□□□□ -1.07
UME1YPL139C AIM21P40563 679 aa8.35□□□□□ -1.07
UME1YPL139C FMS1P50264 508 aa8.35□□□□□ -1.07
UME1YPL139C ASE1P50275 885 aa8.35□□□□□ -1.07
UME1YPL139C YPR117WQ06116 2489 aa8.35□□□□□ -1.07
UME1YPL139C RNR3P21672 869 aaKnown RBP8.35□□□□□ -1.07
UME1YPL139C TKL1P23254 680 aaKnown RBP8.35□□□□□ -1.07
UME1YPL139C UGA4P32837 571 aa8.35□□□□□ -1.07
UME1YPL139C YKR018CP36114 725 aa8.35□□□□□ -1.07
UME1YPL139C FLR1P38124 548 aa8.35□□□□□ -1.07
UME1YPL139C REG2P38232 338 aa8.35□□□□□ -1.07
UME1YPL139C NOC2P39744 710 aaKnown RBP8.35□□□□□ -1.07
UME1YPL139C SKP2P42843 763 aa8.35□□□□□ -1.07
UME1YPL139C GUD1Q07729 489 aa8.35□□□□□ -1.07
UME1YPL139C PDC1P06169 563 aaKnown RBP8.34□□□□□ -1.07
UME1YPL139C POX1P13711 748 aa8.34□□□□□ -1.07
UME1YPL139C AMS1P22855 1083 aa8.34□□□□□ -1.07
UME1YPL139C PES4P39684 611 aa8.34□□□□□ -1.07
UME1YPL139C EPL1P43572 832 aa8.34□□□□□ -1.07
UME1YPL139C CLA4P48562 842 aa8.34□□□□□ -1.07
UME1YPL139C ESF1Q06344 628 aaKnown RBP8.34□□□□□ -1.07
UME1YPL139C MSC6Q08818 692 aaKnown RBP8.34□□□□□ -1.07
UME1YPL139C STI1P15705 589 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms