RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
GDE1	YPL110C	KAR9	P32526	644 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	VPS35	P34110	944 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	SNX4	P47057	423 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	KRE28	Q04431	385 aa		4.91	□□□□□ -1.62
GDE1	YPL110C	TPD3	P31383	635 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	RPN12	P32496	274 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	RRP1	P35178	278 aa	Predicted RBP	4.9	□□□□□ -1.62
GDE1	YPL110C	NUP120	P35729	1037 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	YTA6	P40328	754 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	MAD1	P40957	749 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	ALG2	P43636	503 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	YMR111C	Q04461	462 aa	Predicted RBP	4.9	□□□□□ -1.62
GDE1	YPL110C	YIG1	Q08956	461 aa		4.9	□□□□□ -1.62
GDE1	YPL110C	MRPL40	P36534	297 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	PSY4	P38193	441 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	COP1	P53622	1201 aa	Known RBP	4.9	□□□□□ -1.63
GDE1	YPL110C	YML108W	Q03759	105 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	SPP382	Q06411	708 aa	Predicted RBP	4.9	□□□□□ -1.63
GDE1	YPL110C	MDM36	Q06820	579 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	PET112	P33893	541 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	VID28	P40547	921 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	SPR3	P41901	512 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	NNT1	Q05874	261 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	VAM6	Q07468	1049 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	BUD7	Q08754	746 aa		4.9	□□□□□ -1.63
GDE1	YPL110C	TEF1	P02994	458 aa	Known RBP	4.89	□□□□□ -1.63
GDE1	YPL110C	PRT1	P06103	763 aa	Known RBP	4.89	□□□□□ -1.63
GDE1	YPL110C	PET122	P10355	254 aa		4.89	□□□□□ -1.63
GDE1	YPL110C	APN1	P22936	367 aa		4.89	□□□□□ -1.63
GDE1	YPL110C	SLX1	P38324	304 aa		4.89	□□□□□ -1.63
GDE1	YPL110C	ECL1	P48235	211 aa		4.89	□□□□□ -1.63
GDE1	YPL110C	CHS5	Q12114	671 aa	Known RBP	4.89	□□□□□ -1.63
GDE1	YPL110C	PMS1	P14242	873 aa		4.89	□□□□□ -1.63
GDE1	YPL110C	APC1	P53886	1748 aa		4.89	□□□□□ -1.63
GDE1	YPL110C	PBY1	P38254	753 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	SAK1	P38990	1142 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	IRR1	P40541	1150 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	LAM5	P43560	674 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	YDL073W	Q07454	984 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	ARD1	P07347	238 aa	Predicted RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	KTR1	P27810	393 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	MET4	P32389	672 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	RFC1	P38630	861 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	YHB1	P39676	399 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	POL31	P46957	487 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	YGL242C	P53066	181 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	DCP2	P53550	970 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	ESBP6	P53918	673 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	POB3	Q04636	552 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	IML1	P47170	1584 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	DPS1	P04802	557 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	STE6	P12866	1290 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	PLC1	P32383	869 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	MNR2	P35724	969 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	UGA2	P38067	497 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	UBP14	P38237	781 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	LSG1	P53145	640 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	RPL34A	P87262	121 aa	Predicted RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	SPN1	Q06505	410 aa	Predicted RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	MSC6	Q08818	692 aa	Known RBP	4.88	□□□□□ -1.63
GDE1	YPL110C	SFI1	Q12369	946 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	YRF1-4	O13559	1382 aa		4.88	□□□□□ -1.63
GDE1	YPL110C	MAK11	P20484	414 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	VPS1	P21576	704 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	MRPL25	P23369	157 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	SLX5	P32828	619 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	LHS1	P36016	881 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	AOS1	Q06624	347 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	LSO2	Q3E772	92 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	TRL1	P09880	827 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	ADH4	P10127	382 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	SSO1	P32867	290 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	YHL012W	P38709	493 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	VPS29	P38759	282 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	BDH2	P39713	417 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	SYG1	P40528	902 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	NUP84	P52891	726 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	CEG1	Q01159	459 aa	Predicted RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	ATG38	Q05789	226 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	YOR289W	Q12012	251 aa	Predicted RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	MCM2	P29469	868 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	XRS2	P33301	854 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	MRP8	P35719	219 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	PPX1	P38698	397 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	ALT1	P52893	592 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	RSA3	Q05942	220 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	GNT1	Q12096	491 aa		4.87	□□□□□ -1.63
GDE1	YPL110C	ROM2	P51862	1356 aa	Known RBP	4.87	□□□□□ -1.63
GDE1	YPL110C	ACP1	P32463	125 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	RPN2	P32565	945 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	YRO2	P38079	344 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	FUI1	P38196	639 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	GLO3	P38682	493 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	KIC1	P38692	1080 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	GGA2	P38817	585 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	STN1	P38960	494 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	HOP2	P53187	214 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	EFM5	P53200	248 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	CAF130	P53280	1122 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms