RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C AVT1P47082 602 aa6.21□□□□□ -1.42
SNF8YPL002C GEA1P47102 1408 aaPredicted RBP6.21□□□□□ -1.42
SNF8YPL002C MSB1P21339 1137 aaKnown RBP6.2□□□□□ -1.42
SNF8YPL002C SEA4P38164 1038 aa6.2□□□□□ -1.42
SNF8YPL002C RIM11P38615 370 aa6.2□□□□□ -1.42
SNF8YPL002C FAR11P53917 953 aa6.2□□□□□ -1.42
SNF8YPL002C GIC2Q06648 383 aa6.2□□□□□ -1.42
SNF8YPL002C CMR1Q12510 522 aaKnown RBP6.2□□□□□ -1.42
SNF8YPL002C IRC24P40580 263 aa6.19□□□□□ -1.42
SNF8YPL002C YMR074CQ04773 145 aa6.19□□□□□ -1.42
SNF8YPL002C YOR223WQ12015 292 aa6.19□□□□□ -1.42
SNF8YPL002C MNL2Q12205 849 aa6.19□□□□□ -1.42
SNF8YPL002C YBT1P32386 1661 aa6.19□□□□□ -1.42
SNF8YPL002C NPR1P22211 790 aa6.18□□□□□ -1.42
SNF8YPL002C ACF4P47129 309 aa6.18□□□□□ -1.42
SNF8YPL002C SDH1Q00711 640 aa6.18□□□□□ -1.42
SNF8YPL002C TRS120Q04183 1289 aa6.18□□□□□ -1.42
SNF8YPL002C HAP1P0CE41 1502 aa6.18□□□□□ -1.42
SNF8YPL002C TRL1P09880 827 aaKnown RBP6.17□□□□□ -1.42
SNF8YPL002C SSA1P10591 642 aaKnown RBP6.17□□□□□ -1.42
SNF8YPL002C GPT2P36148 743 aa6.17□□□□□ -1.42
SNF8YPL002C GCD1P09032 578 aaPredicted RBP6.16□□□□□ -1.42
SNF8YPL002C PRP5P21372 849 aaPredicted RBP6.16□□□□□ -1.42
SNF8YPL002C TYS1P36421 394 aaKnown RBP6.16□□□□□ -1.42
SNF8YPL002C YNL011CP53980 444 aa6.16□□□□□ -1.42
SNF8YPL002C BUD21Q08492 214 aaPredicted RBP6.16□□□□□ -1.42
SNF8YPL002C YIG1Q08956 461 aa6.16□□□□□ -1.42
SNF8YPL002C NUP188P52593 1655 aaKnown RBP6.16□□□□□ -1.42
SNF8YPL002C IML1P47170 1584 aa6.15□□□□□ -1.42
SNF8YPL002C HTS1P07263 546 aaKnown RBP6.15□□□□□ -1.42
SNF8YPL002C ECM2P38241 364 aaKnown RBP6.15□□□□□ -1.42
SNF8YPL002C GCV1P48015 400 aa6.15□□□□□ -1.42
SNF8YPL002C MSH6Q03834 1242 aa6.15□□□□□ -1.42
SNF8YPL002C WHI3P34761 661 aaKnown RBP6.14□□□□□ -1.43
SNF8YPL002C DOT1Q04089 582 aaKnown RBP6.14□□□□□ -1.43
SNF8YPL002C BSC2Q05611 235 aa6.14□□□□□ -1.43
SNF8YPL002C GRS1P38088 690 aaKnown RBP6.13□□□□□ -1.43
SNF8YPL002C YHL008CP38750 627 aa6.13□□□□□ -1.43
SNF8YPL002C CDC55Q00362 526 aa6.13□□□□□ -1.43
SNF8YPL002C VMR1P38735 1592 aa6.13□□□□□ -1.43
SNF8YPL002C FLP1P03870 423 aa6.12□□□□□ -1.43
SNF8YPL002C ERP5P38819 212 aa6.12□□□□□ -1.43
SNF8YPL002C MMM1P41800 426 aa6.12□□□□□ -1.43
SNF8YPL002C MDJ2P42834 146 aa6.12□□□□□ -1.43
SNF8YPL002C SAP155P43612 1002 aa6.12□□□□□ -1.43
SNF8YPL002C FRT1Q99332 602 aa6.12□□□□□ -1.43
SNF8YPL002C SRB8P25648 1427 aa6.11□□□□□ -1.43
SNF8YPL002C CDC3P32457 520 aaKnown RBP6.11□□□□□ -1.43
SNF8YPL002C AOS1Q06624 347 aa6.11□□□□□ -1.43
SNF8YPL002C GPI13Q07830 1017 aa6.11□□□□□ -1.43
SNF8YPL002C YLL054CQ12244 843 aa6.11□□□□□ -1.43
SNF8YPL002C ELM1P32801 640 aa6.1□□□□□ -1.43
SNF8YPL002C LRG1P35688 1017 aa6.1□□□□□ -1.43
SNF8YPL002C CIT3P43635 486 aa6.1□□□□□ -1.43
SNF8YPL002C NUT1P53114 1132 aa6.1□□□□□ -1.43
SNF8YPL002C UTP22P53254 1237 aaPredicted RBP6.1□□□□□ -1.43
SNF8YPL002C MEC3Q02574 474 aa6.1□□□□□ -1.43
SNF8YPL002C ALG6Q12001 544 aaKnown RBP6.1□□□□□ -1.43
SNF8YPL002C YBL113CQ7M4S9 792 aa6.1□□□□□ -1.43
SNF8YPL002C INP54Q08227 384 aaKnown RBP6.09□□□□□ -1.43
SNF8YPL002C TY1A-LR4P0C2I8 440 aaKnown RBP6.08□□□□□ -1.44
SNF8YPL002C TY1A-DR6P0CX70 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-ER1P0CX71 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-LR2P0CX72 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-PLP0CX73 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-JR1P0CX74 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-LR3P0CX75 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-ML2P0CX76 440 aa6.08□□□□□ -1.44
SNF8YPL002C REI1P38344 393 aaPredicted RBP6.08□□□□□ -1.44
SNF8YPL002C YAF9P53930 226 aa6.08□□□□□ -1.44
SNF8YPL002C NUT2Q06213 157 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-GR1Q12085 440 aa6.08□□□□□ -1.44
SNF8YPL002C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.08□□□□□ -1.44
SNF8YPL002C TY1A-OLQ92392 440 aaKnown RBP6.08□□□□□ -1.44
SNF8YPL002C MSH4P40965 878 aaPredicted RBP6.07□□□□□ -1.44
SNF8YPL002C MON1P53129 644 aa6.07□□□□□ -1.44
SNF8YPL002C RCM1P53972 490 aa6.07□□□□□ -1.44
SNF8YPL002C EAR1Q03212 550 aa6.07□□□□□ -1.44
SNF8YPL002C PMT7Q06644 662 aa6.07□□□□□ -1.44
SNF8YPL002C HAT1Q12341 374 aa6.07□□□□□ -1.44
SNF8YPL002C RPS4AP0CX35 261 aaKnown RBP6.06□□□□□ -1.44
SNF8YPL002C RPS4BP0CX36 261 aaKnown RBP6.06□□□□□ -1.44
SNF8YPL002C SEG2P34250 1132 aa6.06□□□□□ -1.44
SNF8YPL002C GEF1P37020 779 aa6.06□□□□□ -1.44
SNF8YPL002C POL12P38121 705 aaPredicted RBP6.06□□□□□ -1.44
SNF8YPL002C OYE3P41816 400 aaPredicted RBP6.06□□□□□ -1.44
SNF8YPL002C RNQ1P25367 405 aa6.05□□□□□ -1.44
SNF8YPL002C MCM5P29496 775 aaKnown RBP6.05□□□□□ -1.44
SNF8YPL002C ALT1P52893 592 aa6.04□□□□□ -1.44
SNF8YPL002C YGR045CP53229 120 aa6.04□□□□□ -1.44
SNF8YPL002C RIA1P53893 1110 aa6.04□□□□□ -1.44
SNF8YPL002C ENT1Q12518 454 aa6.04□□□□□ -1.44
SNF8YPL002C PDR11P40550 1411 aa6.04□□□□□ -1.44
SNF8YPL002C ELA1P53861 379 aaPredicted RBP6.03□□□□□ -1.44
SNF8YPL002C NOC3Q07896 663 aaPredicted RBP6.03□□□□□ -1.44
SNF8YPL002C YOR059CQ08448 450 aaKnown RBP6.03□□□□□ -1.44
SNF8YPL002C NSI1Q12457 570 aa6.03□□□□□ -1.44
SNF8YPL002C DFG16Q99234 619 aa6.03□□□□□ -1.44
SNF8YPL002C PDR5P33302 1511 aaKnown RBP6.02□□□□□ -1.45
SNF8YPL002C HSP78P33416 811 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms